RNA–Protein interactions for RNA: ENST00000524258.2

CLN8-207, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 2

Gene CLN8, Length 835 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-207ENST00000524258 ERVFC1P60507 584 aa13.1□□□□□ -0.31
CLN8-207ENST00000524258 UBE3AQ05086 875 aa13.1□□□□□ -0.31
CLN8-207ENST00000524258 STRN3Q13033 797 aa13.1□□□□□ -0.31
CLN8-207ENST00000524258 CUL4BQ13620 913 aa13.1□□□□□ -0.31
CLN8-207ENST00000524258 CSPP1Q1MSJ5 1256 aa13.1□□□□□ -0.31
CLN8-207ENST00000524258 HERC4Q5GLZ8 1057 aaPredicted RBP13.1□□□□□ -0.31
CLN8-207ENST00000524258 EPM2AIP1Q7L775 607 aaPredicted RBP13.1□□□□□ -0.31
CLN8-207ENST00000524258 ZBTB33Q86T24 672 aa13.1□□□□□ -0.31
CLN8-207ENST00000524258 FSIP1Q8NA03 581 aa13.1□□□□□ -0.31
CLN8-207ENST00000524258 POF1BQ8WVV4 589 aa13.1□□□□□ -0.31
CLN8-207ENST00000524258 IGSF21Q96ID5 467 aa13.1□□□□□ -0.31
CLN8-207ENST00000524258 ADPGKQ9BRR6 497 aa13.1□□□□□ -0.31
CLN8-207ENST00000524258 ZHX3Q9H4I2 956 aa13.1□□□□□ -0.31
CLN8-207ENST00000524258 PRDM6Q9NQX0 595 aa13.1□□□□□ -0.31
CLN8-207ENST00000524258 AAASQ9NRG9 546 aa13.1□□□□□ -0.31
CLN8-207ENST00000524258 MARCH5Q9NX47 278 aa13.1□□□□□ -0.31
CLN8-207ENST00000524258 SPG21Q9NZD8 308 aa13.1□□□□□ -0.31
CLN8-207ENST00000524258 TBC1D7Q9P0N9 293 aa13.1□□□□□ -0.31
CLN8-207ENST00000524258 PARP2Q9UGN5 583 aa13.1□□□□□ -0.31
CLN8-207ENST00000524258 PCDHB12Q9Y5F1 795 aa13.1□□□□□ -0.31
CLN8-207ENST00000524258 PCDHGC5Q9Y5F6 944 aa13.1□□□□□ -0.31
CLN8-207ENST00000524258 ATG2AQ2TAZ0 1938 aa13.09□□□□□ -0.31
CLN8-207ENST00000524258 F8W810 466 aa13.09□□□□□ -0.31
CLN8-207ENST00000524258 NRP1O14786 923 aa13.09□□□□□ -0.31
CLN8-207ENST00000524258 GTPBP6O43824 516 aaPredicted RBP13.09□□□□□ -0.31
CLN8-207ENST00000524258 ZC3H11AO75152 810 aaKnown RBP eCLIP13.09□□□□□ -0.31
CLN8-207ENST00000524258 IDEP14735 1019 aa13.09□□□□□ -0.31
CLN8-207ENST00000524258 IGFBP6P24592 240 aaPredicted RBP13.09□□□□□ -0.31
CLN8-207ENST00000524258 AFMP43652 599 aa13.09□□□□□ -0.31
CLN8-207ENST00000524258 SNW1Q13573 536 aaKnown RBP13.09□□□□□ -0.31
CLN8-207ENST00000524258 CCDC85BQ15834 202 aaPredicted RBP13.09□□□□□ -0.31
CLN8-207ENST00000524258 SLC10A6Q3KNW5 377 aa13.09□□□□□ -0.31
CLN8-207ENST00000524258 ZNF568Q3ZCX4 644 aa13.09□□□□□ -0.31
CLN8-207ENST00000524258 SEZ6Q53EL9 994 aa13.09□□□□□ -0.31
CLN8-207ENST00000524258 ZBTB41Q5SVQ8 909 aa13.09□□□□□ -0.31
CLN8-207ENST00000524258 L1TD1Q5T7N2 865 aaKnown RBP13.09□□□□□ -0.31
CLN8-207ENST00000524258 CD300LGQ6UXG3 332 aa13.09□□□□□ -0.31
CLN8-207ENST00000524258 UNC13DQ70J99 1090 aa13.09□□□□□ -0.31
CLN8-207ENST00000524258 RNF168Q8IYW5 571 aaPredicted RBP13.09□□□□□ -0.31
CLN8-207ENST00000524258 FMR1NBQ8N0W7 255 aaPredicted RBP13.09□□□□□ -0.31
CLN8-207ENST00000524258 SLC17A8Q8NDX2 589 aa13.09□□□□□ -0.31
CLN8-207ENST00000524258 URGCPQ8TCY9 931 aa13.09□□□□□ -0.31
CLN8-207ENST00000524258 MRPS27Q92552 414 aaKnown RBP13.09□□□□□ -0.31
CLN8-207ENST00000524258 HVCN1Q96D96 273 aa13.09□□□□□ -0.31
CLN8-207ENST00000524258 ZMAT2Q96NC0 199 aaKnown RBP13.09□□□□□ -0.31
CLN8-207ENST00000524258 PPP1R10Q96QC0 940 aaKnown RBP13.09□□□□□ -0.31
CLN8-207ENST00000524258 PYM1Q9BRP8 204 aaKnown RBP13.09□□□□□ -0.31
CLN8-207ENST00000524258 TMEM175Q9BSA9 504 aa13.09□□□□□ -0.31
CLN8-207ENST00000524258 LRRC27Q9C0I9 530 aa13.09□□□□□ -0.31
CLN8-207ENST00000524258 BLZF1Q9H2G9 400 aa13.09□□□□□ -0.31
CLN8-207ENST00000524258 TSHZ2Q9NRE2 1034 aa13.09□□□□□ -0.31
CLN8-207ENST00000524258 CHMP5Q9NZZ3 219 aa13.09□□□□□ -0.31
CLN8-207ENST00000524258 USP25Q9UHP3 1055 aa13.09□□□□□ -0.31
CLN8-207ENST00000524258 GDAQ9Y2T3 454 aa13.09□□□□□ -0.31
CLN8-207ENST00000524258 PLXNA4Q9HCM2 1894 aa13.08□□□□□ -0.32
CLN8-207ENST00000524258 SMIM28A0A1B0GU29 152 aa13.08□□□□□ -0.32
CLN8-207ENST00000524258 PVALEFA0A1B0GWK0 134 aa13.08□□□□□ -0.32
CLN8-207ENST00000524258 ZNF202O95125 648 aa13.08□□□□□ -0.32
CLN8-207ENST00000524258 KCNE1P15382 129 aa13.08□□□□□ -0.32
CLN8-207ENST00000524258 ABCD1P33897 745 aa13.08□□□□□ -0.32
CLN8-207ENST00000524258 PPM1AP35813 382 aa13.08□□□□□ -0.32
CLN8-207ENST00000524258 ANP32AP39687 249 aaKnown RBP13.08□□□□□ -0.32
CLN8-207ENST00000524258 SYKP43405 635 aa13.08□□□□□ -0.32
CLN8-207ENST00000524258 AMPD3Q01432 767 aa13.08□□□□□ -0.32
CLN8-207ENST00000524258 SOX4Q06945 474 aaPredicted RBP13.08□□□□□ -0.32
CLN8-207ENST00000524258 GRIK3Q13003 919 aa13.08□□□□□ -0.32
CLN8-207ENST00000524258 NOLC1Q14978 699 aaKnown RBP eCLIP13.08□□□□□ -0.32
CLN8-207ENST00000524258 TCEAL5Q5H9L2 206 aa13.08□□□□□ -0.32
CLN8-207ENST00000524258 SPOUT1Q5T280 376 aaKnown RBP13.08□□□□□ -0.32
CLN8-207ENST00000524258 ADGRD2Q7Z7M1 963 aa13.08□□□□□ -0.32
CLN8-207ENST00000524258 CCDC65Q8IXS2 484 aa13.08□□□□□ -0.32
CLN8-207ENST00000524258 THNSL1Q8IYQ7 743 aa13.08□□□□□ -0.32
CLN8-207ENST00000524258 HACE1Q8IYU2 909 aa13.08□□□□□ -0.32
CLN8-207ENST00000524258 SNX27Q96L92 541 aa13.08□□□□□ -0.32
CLN8-207ENST00000524258 PAAF1Q9BRP4 392 aa13.08□□□□□ -0.32
CLN8-207ENST00000524258 GBP3Q9H0R5 595 aa13.08□□□□□ -0.32
CLN8-207ENST00000524258 MRPL44Q9H9J2 332 aaKnown RBP13.08□□□□□ -0.32
CLN8-207ENST00000524258 CNTN3Q9P232 1028 aa13.08□□□□□ -0.32
CLN8-207ENST00000524258 CACNG4Q9UBN1 327 aa13.08□□□□□ -0.32
CLN8-207ENST00000524258 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.07□□□□□ -0.32
CLN8-207ENST00000524258 TTC26A0AVF1 554 aa13.07□□□□□ -0.32
CLN8-207ENST00000524258 HNRNPDLO14979 420 aaKnown RBP13.07□□□□□ -0.32
CLN8-207ENST00000524258 OGTO15294 1046 aa13.07□□□□□ -0.32
CLN8-207ENST00000524258 CLDN3O15551 220 aa13.07□□□□□ -0.32
CLN8-207ENST00000524258 LILRB3O75022 631 aa13.07□□□□□ -0.32
CLN8-207ENST00000524258 PRPF6O94906 941 aaKnown RBP13.07□□□□□ -0.32
CLN8-207ENST00000524258 ALDH2P05091 517 aa13.07□□□□□ -0.32
CLN8-207ENST00000524258 PRR29P0C7W0 189 aa13.07□□□□□ -0.32
CLN8-207ENST00000524258 TNFSF9P41273 254 aa13.07□□□□□ -0.32
CLN8-207ENST00000524258 ALDH7A1P49419 539 aaKnown RBP13.07□□□□□ -0.32
CLN8-207ENST00000524258 OSTNP61366 133 aa13.07□□□□□ -0.32
CLN8-207ENST00000524258 ASIC1P78348 528 aa13.07□□□□□ -0.32
CLN8-207ENST00000524258 RNASELQ05823 741 aaKnown RBP13.07□□□□□ -0.32
CLN8-207ENST00000524258 HYAL1Q12794 435 aa13.07□□□□□ -0.32
CLN8-207ENST00000524258 ZBTB6Q15916 424 aa13.07□□□□□ -0.32
CLN8-207ENST00000524258 PTPROQ16827 1216 aa13.07□□□□□ -0.32
CLN8-207ENST00000524258 TMEM132AQ24JP5 1023 aa13.07□□□□□ -0.32
CLN8-207ENST00000524258 CTC1Q2NKJ3 1217 aa13.07□□□□□ -0.32
CLN8-207ENST00000524258 CRELD2Q6UXH1 353 aaPredicted RBP13.07□□□□□ -0.32
CLN8-207ENST00000524258 KRBA2Q6ZNG9 492 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms