RNA–Protein interactions for RNA: ENST00000523685.5

CTNNA1-239, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 694 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-239ENST00000523685 HIPK3Q9H422 1215 aa6.19□□□□□ -1.42
CTNNA1-239ENST00000523685 ACAD9Q9H845 621 aa6.19□□□□□ -1.42
CTNNA1-239ENST00000523685 SLC28A3Q9HAS3 691 aa6.19□□□□□ -1.42
CTNNA1-239ENST00000523685 ZNF287Q9HBT7 754 aa6.19□□□□□ -1.42
CTNNA1-239ENST00000523685 EPB41L4AQ9HCS5 686 aaPredicted RBP6.19□□□□□ -1.42
CTNNA1-239ENST00000523685 IL23AQ9NPF7 189 aa6.19□□□□□ -1.42
CTNNA1-239ENST00000523685 ECHDC1Q9NTX5 307 aa6.19□□□□□ -1.42
CTNNA1-239ENST00000523685 RNF146Q9NTX7 359 aa6.19□□□□□ -1.42
CTNNA1-239ENST00000523685 MTMR4Q9NYA4 1195 aa6.19□□□□□ -1.42
CTNNA1-239ENST00000523685 ZSWIM5Q9P217 1185 aa6.19□□□□□ -1.42
CTNNA1-239ENST00000523685 THEGQ9P2T0 379 aa6.19□□□□□ -1.42
CTNNA1-239ENST00000523685 APEX2Q9UBZ4 518 aa6.19□□□□□ -1.42
CTNNA1-239ENST00000523685 ZMYM5Q9UJ78 669 aa6.19□□□□□ -1.42
CTNNA1-239ENST00000523685 RNF112Q9ULX5 631 aa6.19□□□□□ -1.42
CTNNA1-239ENST00000523685 YBX2Q9Y2T7 364 aaKnown RBP6.19□□□□□ -1.42
CTNNA1-239ENST00000523685 SPTBN5Q9NRC6 3674 aaKnown RBP6.19□□□□□ -1.42
CTNNA1-239ENST00000523685 COL11A1P12107 1806 aaPredicted RBP6.18□□□□□ -1.42
CTNNA1-239ENST00000523685 IGKV6D-41A0A0C4DH26 115 aa6.18□□□□□ -1.42
CTNNA1-239ENST00000523685 SHISA3A0PJX4 238 aa6.18□□□□□ -1.42
CTNNA1-239ENST00000523685 ASB14A6NK59 587 aa6.18□□□□□ -1.42
CTNNA1-239ENST00000523685 H3BS24 57 aa6.18□□□□□ -1.42
CTNNA1-239ENST00000523685 NOP56O00567 594 aaKnown RBP6.18□□□□□ -1.42
CTNNA1-239ENST00000523685 CTAGE5O15320 804 aa6.18□□□□□ -1.42
CTNNA1-239ENST00000523685 ZEB2O60315 1214 aa6.18□□□□□ -1.42
CTNNA1-239ENST00000523685 MYOGP15173 224 aa6.18□□□□□ -1.42
CTNNA1-239ENST00000523685 SLC1A4P43007 532 aa6.18□□□□□ -1.42
CTNNA1-239ENST00000523685 STAT2P52630 851 aa6.18□□□□□ -1.42
CTNNA1-239ENST00000523685 MRPS5P82675 430 aaKnown RBP6.18□□□□□ -1.42
CTNNA1-239ENST00000523685 TFAP4Q01664 338 aa6.18□□□□□ -1.42
CTNNA1-239ENST00000523685 ITGA7Q13683 1181 aa6.18□□□□□ -1.42
CTNNA1-239ENST00000523685 AKNAD1Q5T1N1 836 aa6.18□□□□□ -1.42
CTNNA1-239ENST00000523685 TMEM63BQ5T3F8 832 aa6.18□□□□□ -1.42
CTNNA1-239ENST00000523685 GIMAP6Q6P9H5 292 aa6.18□□□□□ -1.42
CTNNA1-239ENST00000523685 NSMFQ6X4W1 530 aa6.18□□□□□ -1.42
CTNNA1-239ENST00000523685 SPATC1Q76KD6 591 aa6.18□□□□□ -1.42
CTNNA1-239ENST00000523685 RASGRP2Q7LDG7 609 aa6.18□□□□□ -1.42
CTNNA1-239ENST00000523685 DEFB128Q7Z7B8 93 aa6.18□□□□□ -1.42
CTNNA1-239ENST00000523685 TSPYL5Q86VY4 417 aaPredicted RBP6.18□□□□□ -1.42
CTNNA1-239ENST00000523685 FBXO16Q8IX29 292 aaPredicted RBP6.18□□□□□ -1.42
CTNNA1-239ENST00000523685 IFNL3Q8IZI9 196 aa6.18□□□□□ -1.42
CTNNA1-239ENST00000523685 ARHGEF39Q8N4T4 335 aa6.18□□□□□ -1.42
CTNNA1-239ENST00000523685 FIBCD1Q8N539 461 aa6.18□□□□□ -1.42
CTNNA1-239ENST00000523685 ZNF655Q8N720 491 aaPredicted RBP6.18□□□□□ -1.42
CTNNA1-239ENST00000523685 ZNF513Q8N8E2 541 aaPredicted RBP6.18□□□□□ -1.42
CTNNA1-239ENST00000523685 FAM133AQ8N9E0 248 aa6.18□□□□□ -1.42
CTNNA1-239ENST00000523685 KBTBD3Q8NAB2 608 aa6.18□□□□□ -1.42
CTNNA1-239ENST00000523685 BVESQ8NE79 360 aa6.18□□□□□ -1.42
CTNNA1-239ENST00000523685 GMCL1P1Q8NEA9 526 aa6.18□□□□□ -1.42
CTNNA1-239ENST00000523685 ADCY4Q8NFM4 1077 aa6.18□□□□□ -1.42
CTNNA1-239ENST00000523685 ATXN2LQ8WWM7 1075 aaKnown RBP6.18□□□□□ -1.42
CTNNA1-239ENST00000523685 HERVK_113Q902F9 699 aa6.18□□□□□ -1.42
CTNNA1-239ENST00000523685 PPP1R14AQ96A00 147 aa6.18□□□□□ -1.42
CTNNA1-239ENST00000523685 SGSM3Q96HU1 749 aa6.18□□□□□ -1.42
CTNNA1-239ENST00000523685 SCLYQ96I15 445 aa6.18□□□□□ -1.42
CTNNA1-239ENST00000523685 ASB2Q96Q27 587 aa6.18□□□□□ -1.42
CTNNA1-239ENST00000523685 UHRF1Q96T88 793 aaPredicted RBP6.18□□□□□ -1.42
CTNNA1-239ENST00000523685 SEC62Q99442 399 aaKnown RBP6.18□□□□□ -1.42
CTNNA1-239ENST00000523685 DSCC1Q9BVC3 393 aa6.18□□□□□ -1.42
CTNNA1-239ENST00000523685 NACAP1Q9BZK3 213 aa6.18□□□□□ -1.42
CTNNA1-239ENST00000523685 CHMP4BQ9H444 224 aaKnown RBP6.18□□□□□ -1.42
CTNNA1-239ENST00000523685 NOL6Q9H6R4 1146 aaKnown RBP6.18□□□□□ -1.42
CTNNA1-239ENST00000523685 CERS4Q9HA82 394 aa6.18□□□□□ -1.42
CTNNA1-239ENST00000523685 A1CFQ9NQ94 594 aaKnown RBP6.18□□□□□ -1.42
CTNNA1-239ENST00000523685 PDGFCQ9NRA1 345 aa6.18□□□□□ -1.42
CTNNA1-239ENST00000523685 SEMA3GQ9NS98 782 aa6.18□□□□□ -1.42
CTNNA1-239ENST00000523685 PFDN2Q9UHV9 154 aa6.18□□□□□ -1.42
CTNNA1-239ENST00000523685 STX8Q9UNK0 236 aa6.18□□□□□ -1.42
CTNNA1-239ENST00000523685 AKT3Q9Y243 479 aa6.18□□□□□ -1.42
CTNNA1-239ENST00000523685 SF3B6Q9Y3B4 125 aaKnown RBP6.18□□□□□ -1.42
CTNNA1-239ENST00000523685 SLC4A7Q9Y6M7 1214 aa6.18□□□□□ -1.42
CTNNA1-239ENST00000523685 MYH8P13535 1937 aa6.18□□□□□ -1.42
CTNNA1-239ENST00000523685 PRUNE2Q8WUY3 3088 aa6.18□□□□□ -1.42
CTNNA1-239ENST00000523685 ASTN1O14525 1302 aa6.18□□□□□ -1.42
CTNNA1-239ENST00000523685 ZNFX1Q9P2E3 1918 aaKnown RBP6.17□□□□□ -1.42
CTNNA1-239ENST00000523685 B4GALT4O60513 344 aa6.17□□□□□ -1.42
CTNNA1-239ENST00000523685 NMT2O60551 498 aa6.17□□□□□ -1.42
CTNNA1-239ENST00000523685 CABYRO75952 493 aa6.17□□□□□ -1.42
CTNNA1-239ENST00000523685 CD4P01730 458 aa6.17□□□□□ -1.42
CTNNA1-239ENST00000523685 SLC3A2P08195 630 aaKnown RBP6.17□□□□□ -1.42
CTNNA1-239ENST00000523685 MYL3P08590 195 aa6.17□□□□□ -1.42
CTNNA1-239ENST00000523685 CYP2C9P11712 490 aa6.17□□□□□ -1.42
CTNNA1-239ENST00000523685 GNAT2P19087 354 aa6.17□□□□□ -1.42
CTNNA1-239ENST00000523685 ITGB7P26010 798 aa6.17□□□□□ -1.42
CTNNA1-239ENST00000523685 TPP2P29144 1249 aaPredicted RBP6.17□□□□□ -1.42
CTNNA1-239ENST00000523685 OAZ1P54368 228 aa6.17□□□□□ -1.42
CTNNA1-239ENST00000523685 PRKCQQ04759 706 aa6.17□□□□□ -1.42
CTNNA1-239ENST00000523685 PPARAQ07869 468 aa6.17□□□□□ -1.42
CTNNA1-239ENST00000523685 SSRP1Q08945 709 aaKnown RBP6.17□□□□□ -1.42
CTNNA1-239ENST00000523685 PPP2R5DQ14738 602 aa6.17□□□□□ -1.42
CTNNA1-239ENST00000523685 MSMPQ1L6U9 139 aa6.17□□□□□ -1.42
CTNNA1-239ENST00000523685 CCDC96Q2M329 555 aa6.17□□□□□ -1.42
CTNNA1-239ENST00000523685 MUM1L1Q5H9M0 696 aa6.17□□□□□ -1.42
CTNNA1-239ENST00000523685 FAM47CQ5HY64 1035 aa6.17□□□□□ -1.42
CTNNA1-239ENST00000523685 C20orf194Q5TEA3 1177 aa6.17□□□□□ -1.42
CTNNA1-239ENST00000523685 POMZP3Q6PJE2 187 aa6.17□□□□□ -1.42
CTNNA1-239ENST00000523685 FAM160B2Q86V87 743 aa6.17□□□□□ -1.42
CTNNA1-239ENST00000523685 CHURC1Q8WUH1 139 aa6.17□□□□□ -1.42
CTNNA1-239ENST00000523685 STAG1Q8WVM7 1258 aa6.17□□□□□ -1.42
CTNNA1-239ENST00000523685 ASB11Q8WXH4 323 aa6.17□□□□□ -1.42
CTNNA1-239ENST00000523685 MISP3Q96FF7 219 aa6.17□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms