RNA–Protein interactions for RNA: ENST00000523636.5

PABPC1-223, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 5

Gene PABPC1, Length 818 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-223ENST00000523636 FAM13CQ8NE31 585 aa6.03□□□□□ -1.44
PABPC1-223ENST00000523636 FLCNQ8NFG4 579 aa6.03□□□□□ -1.44
PABPC1-223ENST00000523636 MAP4K1Q92918 833 aa6.03□□□□□ -1.44
PABPC1-223ENST00000523636 RUNDC1Q96C34 613 aa6.03□□□□□ -1.44
PABPC1-223ENST00000523636 FAM83CQ9BQN1 747 aa6.03□□□□□ -1.44
PABPC1-223ENST00000523636 FOXQ1Q9C009 403 aa6.03□□□□□ -1.44
PABPC1-223ENST00000523636 ZHX3Q9H4I2 956 aa6.03□□□□□ -1.44
PABPC1-223ENST00000523636 CNNM2Q9H8M5 875 aa6.03□□□□□ -1.44
PABPC1-223ENST00000523636 FBRSQ9HAH7 460 aa6.03□□□□□ -1.44
PABPC1-223ENST00000523636 AS3MTQ9HBK9 375 aa6.03□□□□□ -1.44
PABPC1-223ENST00000523636 GOLGA6AQ9NYA3 693 aa6.03□□□□□ -1.44
PABPC1-223ENST00000523636 BARX2Q9UMQ3 279 aaPredicted RBP6.03□□□□□ -1.44
PABPC1-223ENST00000523636 DYNC1LI1Q9Y6G9 523 aaKnown RBP6.03□□□□□ -1.44
PABPC1-223ENST00000523636 KIAA1671Q9BY89 1806 aa6.03□□□□□ -1.44
PABPC1-223ENST00000523636 DOPEY2Q9Y3R5 2298 aa6.02□□□□□ -1.44
PABPC1-223ENST00000523636 LRBAP50851 2863 aa6.02□□□□□ -1.45
PABPC1-223ENST00000523636 ITPR2Q14571 2701 aa6.02□□□□□ -1.45
PABPC1-223ENST00000523636 CREBBPQ92793 2442 aa6.02□□□□□ -1.45
PABPC1-223ENST00000523636 C11orf97A0A1B0GVM6 126 aaPredicted RBP6.02□□□□□ -1.45
PABPC1-223ENST00000523636 TNFRSF10CO14798 259 aa6.02□□□□□ -1.45
PABPC1-223ENST00000523636 TOP3BO95985 862 aaKnown RBP6.02□□□□□ -1.45
PABPC1-223ENST00000523636 PRB1P04280 392 aa6.02□□□□□ -1.45
PABPC1-223ENST00000523636 ITGB2P05107 769 aa6.02□□□□□ -1.45
PABPC1-223ENST00000523636 LDHCP07864 332 aa6.02□□□□□ -1.45
PABPC1-223ENST00000523636 VCAM1P19320 739 aa6.02□□□□□ -1.45
PABPC1-223ENST00000523636 SP100P23497 879 aaPredicted RBP6.02□□□□□ -1.45
PABPC1-223ENST00000523636 RFC2P35250 354 aa6.02□□□□□ -1.45
PABPC1-223ENST00000523636 CCNFP41002 786 aa6.02□□□□□ -1.45
PABPC1-223ENST00000523636 HDAC1Q13547 482 aaPredicted RBP6.02□□□□□ -1.45
PABPC1-223ENST00000523636 GCKRQ14397 625 aa6.02□□□□□ -1.45
PABPC1-223ENST00000523636 NKG7Q16617 165 aa6.02□□□□□ -1.45
PABPC1-223ENST00000523636 L1TD1Q5T7N2 865 aaKnown RBP6.02□□□□□ -1.45
PABPC1-223ENST00000523636 OVOS1Q6IE37 1185 aa6.02□□□□□ -1.45
PABPC1-223ENST00000523636 CCDC81Q6ZN84 652 aa6.02□□□□□ -1.45
PABPC1-223ENST00000523636 BEND4Q6ZU67 534 aa6.02□□□□□ -1.45
PABPC1-223ENST00000523636 NLRC3Q7RTR2 1065 aa6.02□□□□□ -1.45
PABPC1-223ENST00000523636 ADGRD2Q7Z7M1 963 aa6.02□□□□□ -1.45
PABPC1-223ENST00000523636 DRC7Q8IY82 874 aa6.02□□□□□ -1.45
PABPC1-223ENST00000523636 UBALD2Q8IYN6 164 aa6.02□□□□□ -1.45
PABPC1-223ENST00000523636 ZNF384Q8TF68 577 aa6.02□□□□□ -1.45
PABPC1-223ENST00000523636 PPIL4Q8WUA2 492 aaKnown RBP eCLIP6.02□□□□□ -1.45
PABPC1-223ENST00000523636 PPP1R13LQ8WUF5 828 aa6.02□□□□□ -1.45
PABPC1-223ENST00000523636 TP53INP1Q96A56 240 aa6.02□□□□□ -1.45
PABPC1-223ENST00000523636 ATG4CQ96DT6 458 aa6.02□□□□□ -1.45
PABPC1-223ENST00000523636 FGD4Q96M96 766 aa6.02□□□□□ -1.45
PABPC1-223ENST00000523636 NEUROD6Q96NK8 337 aa6.02□□□□□ -1.45
PABPC1-223ENST00000523636 CEP89Q96ST8 783 aa6.02□□□□□ -1.45
PABPC1-223ENST00000523636 LSM14BQ9BX40 385 aaKnown RBP6.02□□□□□ -1.45
PABPC1-223ENST00000523636 KATNBL1Q9H079 304 aa6.02□□□□□ -1.45
PABPC1-223ENST00000523636 KCNF1Q9H3M0 494 aa6.02□□□□□ -1.45
PABPC1-223ENST00000523636 BABAM1Q9NWV8 329 aa6.02□□□□□ -1.45
PABPC1-223ENST00000523636 ANKFY1Q9P2R3 1169 aa6.02□□□□□ -1.45
PABPC1-223ENST00000523636 CDH22Q9UJ99 828 aa6.02□□□□□ -1.45
PABPC1-223ENST00000523636 FAM184BQ9ULE4 1060 aa6.02□□□□□ -1.45
PABPC1-223ENST00000523636 SORCS3Q9UPU3 1222 aa6.02□□□□□ -1.45
PABPC1-223ENST00000523636 LZTS1Q9Y250 596 aa6.02□□□□□ -1.45
PABPC1-223ENST00000523636 MAP3K2Q9Y2U5 619 aa6.02□□□□□ -1.45
PABPC1-223ENST00000523636 RAXQ9Y2V3 346 aa6.02□□□□□ -1.45
PABPC1-223ENST00000523636 SHROOM3Q8TF72 1996 aa6.02□□□□□ -1.45
PABPC1-223ENST00000523636 PTPRQQ9UMZ3 2332 aa6.02□□□□□ -1.45
PABPC1-223ENST00000523636 NF1P21359 2839 aa6.01□□□□□ -1.45
PABPC1-223ENST00000523636 POLQO75417 2590 aa6.01□□□□□ -1.45
PABPC1-223ENST00000523636 CHL1O00533 1208 aa6.01□□□□□ -1.45
PABPC1-223ENST00000523636 DNAJA2O60884 412 aa6.01□□□□□ -1.45
PABPC1-223ENST00000523636 IGHA1P01876 353 aa6.01□□□□□ -1.45
PABPC1-223ENST00000523636 ASGR2P07307 311 aa6.01□□□□□ -1.45
PABPC1-223ENST00000523636 PLA2G2AP14555 144 aa6.01□□□□□ -1.45
PABPC1-223ENST00000523636 NME1P15531 152 aaKnown RBP6.01□□□□□ -1.45
PABPC1-223ENST00000523636 ATF7P17544 494 aaPredicted RBP6.01□□□□□ -1.45
PABPC1-223ENST00000523636 SPINK2P20155 84 aa6.01□□□□□ -1.45
PABPC1-223ENST00000523636 KCNJ6P48051 423 aa6.01□□□□□ -1.45
PABPC1-223ENST00000523636 NDUFV1P49821 464 aa6.01□□□□□ -1.45
PABPC1-223ENST00000523636 BRD3Q15059 726 aa6.01□□□□□ -1.45
PABPC1-223ENST00000523636 ZYXQ15942 572 aaKnown RBP6.01□□□□□ -1.45
PABPC1-223ENST00000523636 TMEM63BQ5T3F8 832 aa6.01□□□□□ -1.45
PABPC1-223ENST00000523636 PRAMEF13Q5VWM6 474 aa6.01□□□□□ -1.45
PABPC1-223ENST00000523636 LIN28BQ6ZN17 250 aaKnown RBP eCLIP6.01□□□□□ -1.452e-26■■■■□ 24.7
PABPC1-223ENST00000523636 PRR23CQ6ZRP0 262 aa6.01□□□□□ -1.45
PABPC1-223ENST00000523636 UBE3DQ7Z6J8 389 aa6.01□□□□□ -1.45
PABPC1-223ENST00000523636 TMEM192Q8IY95 271 aa6.01□□□□□ -1.45
PABPC1-223ENST00000523636 VGLL2Q8N8G2 317 aa6.01□□□□□ -1.45
PABPC1-223ENST00000523636 VN1R2Q8NFZ6 395 aa6.01□□□□□ -1.45
PABPC1-223ENST00000523636 GIMAP7Q8NHV1 300 aa6.01□□□□□ -1.45
PABPC1-223ENST00000523636 ANAPC16Q96DE5 110 aa6.01□□□□□ -1.45
PABPC1-223ENST00000523636 PSMG3-AS1Q96PY0 264 aa6.01□□□□□ -1.45
PABPC1-223ENST00000523636 CTAGE1Q96RT6 745 aa6.01□□□□□ -1.45
PABPC1-223ENST00000523636 FTOQ9C0B1 505 aaKnown RBP eCLIP6.01□□□□□ -1.45
PABPC1-223ENST00000523636 RSPH9Q9H1X1 276 aaPredicted RBP6.01□□□□□ -1.45
PABPC1-223ENST00000523636 SLKQ9H2G2 1235 aaPredicted RBP6.01□□□□□ -1.45
PABPC1-223ENST00000523636 ARNT2Q9HBZ2 717 aa6.01□□□□□ -1.45
PABPC1-223ENST00000523636 DLGAP2Q9P1A6 1054 aa6.01□□□□□ -1.45
PABPC1-223ENST00000523636 KLHL3Q9UH77 587 aa6.01□□□□□ -1.45
PABPC1-223ENST00000523636 ANAPC4Q9UJX5 808 aa6.01□□□□□ -1.45
PABPC1-223ENST00000523636 CTDP1Q9Y5B0 961 aaPredicted RBP6.01□□□□□ -1.45
PABPC1-223ENST00000523636 SLC12A7Q9Y666 1083 aa6.01□□□□□ -1.45
PABPC1-223ENST00000523636 FOCADQ5VW36 1801 aa6.01□□□□□ -1.45
PABPC1-223ENST00000523636 SALL1Q9NSC2 1324 aa6□□□□□ -1.45
PABPC1-223ENST00000523636 PLXNA4Q9HCM2 1894 aa6□□□□□ -1.45
PABPC1-223ENST00000523636 CHURC1-FNTBB4DL54 471 aa6□□□□□ -1.45
PABPC1-223ENST00000523636 RGS13O14921 159 aa6□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms