RNA–Protein interactions for RNA: ENST00000523390.1

PCDHGB1-201, Transcript of protocadherin gamma subfamily B, 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGB1, Length 4,590 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB1-201ENST00000523390 MUM1L1Q5H9M0 696 aa13.92□□□□□ -0.18
PCDHGB1-201ENST00000523390 ALS2CLQ60I27 953 aa13.92□□□□□ -0.18
PCDHGB1-201ENST00000523390 TRIM65Q6PJ69 517 aa13.92□□□□□ -0.18
PCDHGB1-201ENST00000523390 RHOT1Q8IXI2 618 aa13.92□□□□□ -0.18
PCDHGB1-201ENST00000523390 CCT6BQ92526 530 aa13.92□□□□□ -0.18
PCDHGB1-201ENST00000523390 KLHL11Q9NVR0 708 aa13.92□□□□□ -0.18
PCDHGB1-201ENST00000523390 ARHGAP25P42331 645 aa13.92□□□□□ -0.18
PCDHGB1-201ENST00000523390 FUT2Q10981 343 aa13.92□□□□□ -0.18
PCDHGB1-201ENST00000523390 TFDP2Q14188 446 aa13.92□□□□□ -0.18
PCDHGB1-201ENST00000523390 MMS22LQ6ZRQ5 1243 aa13.92□□□□□ -0.18
PCDHGB1-201ENST00000523390 ZNF720Q7Z2F6 126 aa13.92□□□□□ -0.18
PCDHGB1-201ENST00000523390 SLC51AQ86UW1 340 aa13.92□□□□□ -0.18
PCDHGB1-201ENST00000523390 RAB3IL1Q8TBN0 382 aa13.92□□□□□ -0.18
PCDHGB1-201ENST00000523390 MAP3K20Q9NYL2 800 aaKnown RBP13.92□□□□□ -0.18
PCDHGB1-201ENST00000523390 KLHL14Q9P2G3 628 aa13.92□□□□□ -0.18
PCDHGB1-201ENST00000523390 HERVK_113P62684 666 aa13.92□□□□□ -0.18
PCDHGB1-201ENST00000523390 E2F4Q16254 413 aa13.92□□□□□ -0.18
PCDHGB1-201ENST00000523390 OPTNQ96CV9 577 aa13.92□□□□□ -0.18
PCDHGB1-201ENST00000523390 IP6K2Q9UHH9 426 aa13.92□□□□□ -0.18
PCDHGB1-201ENST00000523390 SLITRK3O94933 977 aa13.91□□□□□ -0.18
PCDHGB1-201ENST00000523390 TMEM132DQ14C87 1099 aa13.91□□□□□ -0.18
PCDHGB1-201ENST00000523390 RWDD4Q6NW29 188 aaKnown RBP13.91□□□□□ -0.18
PCDHGB1-201ENST00000523390 OTOP1Q7RTM1 612 aa13.91□□□□□ -0.18
PCDHGB1-201ENST00000523390 CCHCR1Q8TD31 782 aa13.91□□□□□ -0.18
PCDHGB1-201ENST00000523390 WNT8AQ9H1J5 351 aa13.91□□□□□ -0.18
PCDHGB1-201ENST00000523390 SAYSD1Q9NPB0 183 aa13.91□□□□□ -0.18
PCDHGB1-201ENST00000523390 DUSP10Q9Y6W6 482 aa13.91□□□□□ -0.18
PCDHGB1-201ENST00000523390 ATP8B3O60423 1300 aa13.91□□□□□ -0.18
PCDHGB1-201ENST00000523390 GOLGA8MH3BSY2 632 aa13.91□□□□□ -0.18
PCDHGB1-201ENST00000523390 EXTL3O43909 919 aa13.91□□□□□ -0.18
PCDHGB1-201ENST00000523390 NR1D1P20393 614 aa13.91□□□□□ -0.18
PCDHGB1-201ENST00000523390 PON1P27169 355 aa13.91□□□□□ -0.18
PCDHGB1-201ENST00000523390 MSH2P43246 934 aa13.91□□□□□ -0.18
PCDHGB1-201ENST00000523390 RGS7P49802 495 aa13.91□□□□□ -0.18
PCDHGB1-201ENST00000523390 MMP14P50281 582 aa13.91□□□□□ -0.18
PCDHGB1-201ENST00000523390 CNTN2Q02246 1040 aa13.91□□□□□ -0.18
PCDHGB1-201ENST00000523390 CCDC62Q6P9F0 684 aa13.91□□□□□ -0.18
PCDHGB1-201ENST00000523390 EP400NLQ6ZTU2 488 aa13.91□□□□□ -0.18
PCDHGB1-201ENST00000523390 VPS52Q8N1B4 723 aa13.91□□□□□ -0.18
PCDHGB1-201ENST00000523390 SMC1BQ8NDV3 1235 aa13.91□□□□□ -0.18
PCDHGB1-201ENST00000523390 PYROXD1Q8WU10 500 aa13.91□□□□□ -0.18
PCDHGB1-201ENST00000523390 ANXA13P27216 316 aa13.91□□□□□ -0.18
PCDHGB1-201ENST00000523390 RARRES1P49788 294 aa13.91□□□□□ -0.18
PCDHGB1-201ENST00000523390 LAMC2Q13753 1193 aa13.91□□□□□ -0.18
PCDHGB1-201ENST00000523390 PRPF31Q8WWY3 499 aaKnown RBP13.91□□□□□ -0.18
PCDHGB1-201ENST00000523390 ARHGEF2Q92974 986 aaKnown RBP13.91□□□□□ -0.18
PCDHGB1-201ENST00000523390 CFAP57Q96MR6 1250 aa13.91□□□□□ -0.18
PCDHGB1-201ENST00000523390 P2RX7Q99572 595 aaKnown RBP13.91□□□□□ -0.18
PCDHGB1-201ENST00000523390 VPS33BQ9H267 617 aa13.91□□□□□ -0.18
PCDHGB1-201ENST00000523390 FOXN3O00409 490 aaPredicted RBP13.91□□□□□ -0.18
PCDHGB1-201ENST00000523390 PRPSAP1Q14558 356 aa13.91□□□□□ -0.18
PCDHGB1-201ENST00000523390 SGSM1Q2NKQ1 1148 aa13.91□□□□□ -0.18
PCDHGB1-201ENST00000523390 GNASQ5JWF2 1037 aa13.91□□□□□ -0.18
PCDHGB1-201ENST00000523390 NT5DC1Q5TFE4 455 aa13.91□□□□□ -0.18
PCDHGB1-201ENST00000523390 CCDC137Q6PK04 289 aaKnown RBP13.91□□□□□ -0.18
PCDHGB1-201ENST00000523390 LRRC8CQ8TDW0 803 aa13.91□□□□□ -0.18
PCDHGB1-201ENST00000523390 MCUR1Q96AQ8 359 aa13.91□□□□□ -0.18
PCDHGB1-201ENST00000523390 MTMR9Q96QG7 549 aa13.91□□□□□ -0.18
PCDHGB1-201ENST00000523390 C17orf75Q9HAS0 396 aa13.91□□□□□ -0.18
PCDHGB1-201ENST00000523390 PRMT7Q9NVM4 692 aaPredicted RBP13.91□□□□□ -0.18
PCDHGB1-201ENST00000523390 ASAP2O43150 1006 aa13.9□□□□□ -0.18
PCDHGB1-201ENST00000523390 RBP5P82980 135 aa13.9□□□□□ -0.18
PCDHGB1-201ENST00000523390 GPC2Q8N158 579 aa13.9□□□□□ -0.18
PCDHGB1-201ENST00000523390 GTF3C2Q8WUA4 911 aaPredicted RBP13.9□□□□□ -0.18
PCDHGB1-201ENST00000523390 HVCN1Q96D96 273 aa13.9□□□□□ -0.18
PCDHGB1-201ENST00000523390 SCYL1Q96KG9 808 aa13.9□□□□□ -0.18
PCDHGB1-201ENST00000523390 PARVAQ9NVD7 372 aa13.9□□□□□ -0.18
PCDHGB1-201ENST00000523390 GRID2IPA4D2P6 1211 aa13.9□□□□□ -0.18
PCDHGB1-201ENST00000523390 SLC4A1P02730 911 aa13.9□□□□□ -0.18
PCDHGB1-201ENST00000523390 FGRP09769 529 aa13.9□□□□□ -0.18
PCDHGB1-201ENST00000523390 ARL13BQ3SXY8 428 aa13.9□□□□□ -0.18
PCDHGB1-201ENST00000523390 TMEM119Q4V9L6 283 aa13.9□□□□□ -0.18
PCDHGB1-201ENST00000523390 HP1BP3Q5SSJ5 553 aaPredicted RBP13.9□□□□□ -0.18
PCDHGB1-201ENST00000523390 CENPUQ71F23 418 aa13.9□□□□□ -0.18
PCDHGB1-201ENST00000523390 C4orf19Q8IY42 314 aa13.9□□□□□ -0.18
PCDHGB1-201ENST00000523390 C18orf8Q96DM3 657 aa13.9□□□□□ -0.18
PCDHGB1-201ENST00000523390 ZNF560Q96MR9 790 aa13.9□□□□□ -0.18
PCDHGB1-201ENST00000523390 POP1Q99575 1024 aaKnown RBP13.9□□□□□ -0.18
PCDHGB1-201ENST00000523390 DUSP9Q99956 384 aaKnown RBP13.9□□□□□ -0.18
PCDHGB1-201ENST00000523390 LACRTQ9GZZ8 138 aa13.9□□□□□ -0.18
PCDHGB1-201ENST00000523390 SLC12A6Q9UHW9 1150 aa13.9□□□□□ -0.18
PCDHGB1-201ENST00000523390 PCDHB2Q9Y5E7 798 aa13.9□□□□□ -0.18
PCDHGB1-201ENST00000523390 PPP2R3BQ9Y5P8 575 aa13.9□□□□□ -0.18
PCDHGB1-201ENST00000523390 MEIS2O14770 477 aa13.9□□□□□ -0.18
PCDHGB1-201ENST00000523390 MYBL1P10243 752 aa13.9□□□□□ -0.18
PCDHGB1-201ENST00000523390 KRT3P12035 628 aa13.9□□□□□ -0.18
PCDHGB1-201ENST00000523390 PTPRAP18433 802 aa13.9□□□□□ -0.18
PCDHGB1-201ENST00000523390 MKRN4PQ13434 485 aaPredicted RBP13.9□□□□□ -0.18
PCDHGB1-201ENST00000523390 TEX2Q8IWB9 1127 aa13.9□□□□□ -0.18
PCDHGB1-201ENST00000523390 RAET1EQ8TD07 263 aa13.9□□□□□ -0.18
PCDHGB1-201ENST00000523390 CFAP36Q96G28 342 aa13.9□□□□□ -0.18
PCDHGB1-201ENST00000523390 ZFYVE28Q9HCC9 887 aa13.9□□□□□ -0.18
PCDHGB1-201ENST00000523390 GBA2Q9HCG7 927 aaPredicted RBP13.9□□□□□ -0.18
PCDHGB1-201ENST00000523390 FNDC3AQ9Y2H6 1198 aaKnown RBP13.9□□□□□ -0.18
PCDHGB1-201ENST00000523390 SART1O43290 800 aaKnown RBP13.9□□□□□ -0.19
PCDHGB1-201ENST00000523390 KRT7P08729 469 aa13.9□□□□□ -0.19
PCDHGB1-201ENST00000523390 PDGFRBP09619 1106 aa13.9□□□□□ -0.19
PCDHGB1-201ENST00000523390 MUTP22033 750 aa13.9□□□□□ -0.19
PCDHGB1-201ENST00000523390 HOXD10P28358 340 aa13.9□□□□□ -0.19
PCDHGB1-201ENST00000523390 CHRNA3P32297 505 aa13.9□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 97 ms