RNA–Protein interactions for RNA: ENST00000523055.5

PCM1-218, Transcript of pericentriolar material 1, humanhuman

TSL 1 (best)

Gene PCM1, Length 1,426 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-218ENST00000523055 KCNK12Q9HB15 430 aa16.65■□□□□ 0.26
PCM1-218ENST00000523055 DNM3Q9UQ16 869 aa16.65■□□□□ 0.26
PCM1-218ENST00000523055 MAP1BP46821 2468 aaKnown RBP16.64■□□□□ 0.25
PCM1-218ENST00000523055 KRBA1A5PL33 1030 aa16.64■□□□□ 0.25
PCM1-218ENST00000523055 NT5C1B-RDH14C9J2C7 533 aa16.64■□□□□ 0.25
PCM1-218ENST00000523055 NARSO43776 548 aaKnown RBP16.64■□□□□ 0.25
PCM1-218ENST00000523055 OFD1O75665 1012 aa16.64■□□□□ 0.25
PCM1-218ENST00000523055 CXCL14O95715 111 aa16.64■□□□□ 0.25
PCM1-218ENST00000523055 LIG1P18858 919 aa16.64■□□□□ 0.25
PCM1-218ENST00000523055 CEBPZQ03701 1054 aaKnown RBP16.64■□□□□ 0.25
PCM1-218ENST00000523055 PTPAQ15257 358 aa16.64■□□□□ 0.25
PCM1-218ENST00000523055 HYIQ5T013 277 aa16.64■□□□□ 0.25
PCM1-218ENST00000523055 NOTUMQ6P988 496 aa16.64■□□□□ 0.25
PCM1-218ENST00000523055 TMC5Q6UXY8 1006 aa16.64■□□□□ 0.25
PCM1-218ENST00000523055 CABP7Q86V35 215 aa16.64■□□□□ 0.25
PCM1-218ENST00000523055 HSCBQ8IWL3 235 aa16.64■□□□□ 0.25
PCM1-218ENST00000523055 RNF39Q9H2S5 420 aa16.64■□□□□ 0.25
PCM1-218ENST00000523055 TBC1D13Q9NVG8 400 aa16.64■□□□□ 0.25
PCM1-218ENST00000523055 DZANK1Q9NVP4 752 aa16.64■□□□□ 0.25
PCM1-218ENST00000523055 IPPQ9Y573 584 aa16.64■□□□□ 0.25
PCM1-218ENST00000523055 IRAK3Q9Y616 596 aa16.64■□□□□ 0.25
PCM1-218ENST00000523055 STK24Q9Y6E0 443 aa16.64■□□□□ 0.25
PCM1-218ENST00000523055 C2orf16Q68DN1 1984 aa16.64■□□□□ 0.25
PCM1-218ENST00000523055 STX6O43752 255 aa16.63■□□□□ 0.25
PCM1-218ENST00000523055 N4BP1O75113 896 aaKnown RBP16.63■□□□□ 0.25
PCM1-218ENST00000523055 ZC3H11AO75152 810 aaKnown RBP eCLIP16.63■□□□□ 0.25
PCM1-218ENST00000523055 SKIP12755 728 aa16.63■□□□□ 0.25
PCM1-218ENST00000523055 RAD51AP2Q09MP3 1159 aa16.63■□□□□ 0.25
PCM1-218ENST00000523055 MAPK7Q13164 816 aa16.63■□□□□ 0.25
PCM1-218ENST00000523055 TMEM119Q4V9L6 283 aa16.63■□□□□ 0.25
PCM1-218ENST00000523055 RINT1Q6NUQ1 792 aa16.63■□□□□ 0.25
PCM1-218ENST00000523055 GLB1LQ6UWU2 654 aa16.63■□□□□ 0.25
PCM1-218ENST00000523055 MRPL10Q7Z7H8 261 aaKnown RBP16.63■□□□□ 0.25
PCM1-218ENST00000523055 GPR149Q86SP6 731 aa16.63■□□□□ 0.25
PCM1-218ENST00000523055 DCLK2Q8N568 766 aa16.63■□□□□ 0.25
PCM1-218ENST00000523055 SPRYD3Q8NCJ5 442 aa16.63■□□□□ 0.25
PCM1-218ENST00000523055 KCNG4Q8TDN1 519 aa16.63■□□□□ 0.25
PCM1-218ENST00000523055 APOL6Q9BWW8 343 aa16.63■□□□□ 0.25
PCM1-218ENST00000523055 CCDC113Q9H0I3 377 aa16.63■□□□□ 0.25
PCM1-218ENST00000523055 GBP3Q9H0R5 595 aa16.63■□□□□ 0.25
PCM1-218ENST00000523055 CSRNP2Q9H175 543 aa16.63■□□□□ 0.25
PCM1-218ENST00000523055 NXF3Q9H4D5 531 aaKnown RBP16.63■□□□□ 0.25
PCM1-218ENST00000523055 RSAD1Q9HA92 442 aa16.63■□□□□ 0.25
PCM1-218ENST00000523055 DNAJB4Q9UDY4 337 aa16.63■□□□□ 0.25
PCM1-218ENST00000523055 HIP1RO75146 1068 aa16.62■□□□□ 0.25
PCM1-218ENST00000523055 NPTXRO95502 500 aa16.62■□□□□ 0.25
PCM1-218ENST00000523055 SSBP05455 408 aaKnown RBP eCLIP16.62■□□□□ 0.25
PCM1-218ENST00000523055 NCLP19338 710 aaKnown RBP16.62■□□□□ 0.25
PCM1-218ENST00000523055 MARCKSP29966 332 aaPredicted RBP16.62■□□□□ 0.25
PCM1-218ENST00000523055 AXLP30530 894 aa16.62■□□□□ 0.25
PCM1-218ENST00000523055 NAMPTP43490 491 aa16.62■□□□□ 0.25
PCM1-218ENST00000523055 NOMO2Q5JPE7 1267 aa16.62■□□□□ 0.25
PCM1-218ENST00000523055 SPECC1Q5M775 1068 aa16.62■□□□□ 0.25
PCM1-218ENST00000523055 FOXD4L5Q5VV16 416 aaPredicted RBP16.62■□□□□ 0.25
PCM1-218ENST00000523055 C1orf186Q6ZWK4 172 aa16.62■□□□□ 0.25
PCM1-218ENST00000523055 USP49Q70CQ1 688 aa16.62■□□□□ 0.25
PCM1-218ENST00000523055 ZBTB8OSQ8IWT0 167 aa16.62■□□□□ 0.25
PCM1-218ENST00000523055 VPS52Q8N1B4 723 aa16.62■□□□□ 0.25
PCM1-218ENST00000523055 DEPTORQ8TB45 409 aa16.62■□□□□ 0.25
PCM1-218ENST00000523055 FOXD4L4Q8WXT5 416 aaPredicted RBP16.62■□□□□ 0.25
PCM1-218ENST00000523055 USP28Q96RU2 1077 aa16.62■□□□□ 0.25
PCM1-218ENST00000523055 MRPL9Q9BYD2 267 aaKnown RBP16.62■□□□□ 0.25
PCM1-218ENST00000523055 FZD8Q9H461 694 aa16.62■□□□□ 0.25
PCM1-218ENST00000523055 NRDE2Q9H7Z3 1164 aa16.62■□□□□ 0.25
PCM1-218ENST00000523055 DLGAP2Q9P1A6 1054 aa16.62■□□□□ 0.25
PCM1-218ENST00000523055 TCHHQ07283 1943 aa16.62■□□□□ 0.25
PCM1-218ENST00000523055 CNTNAP2Q9UHC6 1331 aa16.62■□□□□ 0.25
PCM1-218ENST00000523055 PDCD11Q14690 1871 aaKnown RBP16.62■□□□□ 0.25
PCM1-218ENST00000523055 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP16.62■□□□□ 0.25
PCM1-218ENST00000523055 SFI1A8K8P3 1242 aa16.62■□□□□ 0.25
PCM1-218ENST00000523055 POMCP01189 267 aa16.62■□□□□ 0.25
PCM1-218ENST00000523055 PRKCBP05771 671 aa16.62■□□□□ 0.25
PCM1-218ENST00000523055 CTSAP10619 480 aa16.62■□□□□ 0.25
PCM1-218ENST00000523055 SLC12A3P55017 1021 aa16.62■□□□□ 0.25
PCM1-218ENST00000523055 PEX3P56589 373 aa16.62■□□□□ 0.25
PCM1-218ENST00000523055 BCAR1P56945 870 aa16.62■□□□□ 0.25
PCM1-218ENST00000523055 CACNB1Q02641 598 aaPredicted RBP16.62■□□□□ 0.25
PCM1-218ENST00000523055 KARSQ15046 597 aaKnown RBP16.62■□□□□ 0.25
PCM1-218ENST00000523055 PCBP1Q15365 356 aaKnown RBP eCLIP16.62■□□□□ 0.25
PCM1-218ENST00000523055 ZNF280BQ86YH2 543 aa16.62■□□□□ 0.25
PCM1-218ENST00000523055 BCL7CQ8WUZ0 217 aaPredicted RBP16.62■□□□□ 0.25
PCM1-218ENST00000523055 RIN2Q8WYP3 895 aaPredicted RBP16.62■□□□□ 0.25
PCM1-218ENST00000523055 KIFAP3Q92845 792 aa16.62■□□□□ 0.25
PCM1-218ENST00000523055 PGBD4Q96DM1 585 aa16.62■□□□□ 0.25
PCM1-218ENST00000523055 CDK5RAP3Q96JB5 506 aa16.62■□□□□ 0.25
PCM1-218ENST00000523055 ZFP42Q96MM3 310 aa16.62■□□□□ 0.25
PCM1-218ENST00000523055 VN1R3Q9BXE9 311 aa16.62■□□□□ 0.25
PCM1-218ENST00000523055 PRMT7Q9NVM4 692 aaPredicted RBP16.62■□□□□ 0.25
PCM1-218ENST00000523055 CHD8Q9HCK8 2581 aa16.61■□□□□ 0.25
PCM1-218ENST00000523055 NPHP3-ACAD11A0A0J9YXS1 232 aa16.61■□□□□ 0.25
PCM1-218ENST00000523055 A0A1B0GUA9 196 aa16.61■□□□□ 0.25
PCM1-218ENST00000523055 DDHD2O94830 711 aa16.61■□□□□ 0.25
PCM1-218ENST00000523055 BMP15O95972 392 aa16.61■□□□□ 0.25
PCM1-218ENST00000523055 ITGA4P13612 1032 aa16.61■□□□□ 0.25
PCM1-218ENST00000523055 AKAP5P24588 427 aa16.61■□□□□ 0.25
PCM1-218ENST00000523055 MLH1P40692 756 aa16.61■□□□□ 0.25
PCM1-218ENST00000523055 PPP2R5AQ15172 486 aa16.61■□□□□ 0.25
PCM1-218ENST00000523055 MAPK6Q16659 721 aa16.61■□□□□ 0.25
PCM1-218ENST00000523055 FAM187BQ17R55 369 aa16.61■□□□□ 0.25
PCM1-218ENST00000523055 EEF1DP3Q658K8 133 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms