RNA–Protein interactions for RNA: ENST00000522122.1

SYNPO-205, Transcript of synaptopodin, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SYNPO, Length 5,098 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO-205ENST00000522122 ZFP69BQ9UJL9 534 aa14.68□□□□□ -0.06
SYNPO-205ENST00000522122 BAG5Q9UL15 447 aa14.68□□□□□ -0.06
SYNPO-205ENST00000522122 SCP2P22307 547 aa14.67□□□□□ -0.06
SYNPO-205ENST00000522122 FMO5P49326 533 aa14.67□□□□□ -0.06
SYNPO-205ENST00000522122 ART3Q13508 389 aa14.67□□□□□ -0.06
SYNPO-205ENST00000522122 SLC27A3Q5K4L6 730 aa14.67□□□□□ -0.06
SYNPO-205ENST00000522122 IZUMO3Q5VZ72 239 aa14.67□□□□□ -0.06
SYNPO-205ENST00000522122 OR6B3Q8NGW1 331 aa14.67□□□□□ -0.06
SYNPO-205ENST00000522122 OR2W6PQ8NHA6 318 aa14.67□□□□□ -0.06
SYNPO-205ENST00000522122 NUDCD1Q96RS6 583 aa14.67□□□□□ -0.06
SYNPO-205ENST00000522122 KIAA0895Q8NCT3 520 aa14.67□□□□□ -0.06
SYNPO-205ENST00000522122 XPO6Q96QU8 1125 aaKnown RBP14.67□□□□□ -0.06
SYNPO-205ENST00000522122 TRIM56Q9BRZ2 755 aaKnown RBP14.67□□□□□ -0.06
SYNPO-205ENST00000522122 HERC5Q9UII4 1024 aaKnown RBP14.67□□□□□ -0.06
SYNPO-205ENST00000522122 HEY1Q9Y5J3 304 aa14.67□□□□□ -0.06
SYNPO-205ENST00000522122 PITPNM2Q9BZ72 1349 aa14.67□□□□□ -0.06
SYNPO-205ENST00000522122 SPDYE16A6NNV3 312 aaPredicted RBP14.67□□□□□ -0.06
SYNPO-205ENST00000522122 SPECC1L-ADORA2AF8WAN1 911 aa14.67□□□□□ -0.06
SYNPO-205ENST00000522122 PHF2O75151 1096 aa14.67□□□□□ -0.06
SYNPO-205ENST00000522122 PDHBP11177 359 aa14.67□□□□□ -0.06
SYNPO-205ENST00000522122 SLC9A1P19634 815 aa14.67□□□□□ -0.06
SYNPO-205ENST00000522122 KRT17Q04695 432 aa14.67□□□□□ -0.06
SYNPO-205ENST00000522122 PDIA2Q13087 525 aaKnown RBP14.67□□□□□ -0.06
SYNPO-205ENST00000522122 SPDYE2Q495Y8 402 aa14.67□□□□□ -0.06
SYNPO-205ENST00000522122 KLHDC7AQ5VTJ3 777 aa14.67□□□□□ -0.06
SYNPO-205ENST00000522122 ATL2Q8NHH9 583 aa14.67□□□□□ -0.06
SYNPO-205ENST00000522122 GRAMD1AQ96CP6 724 aa14.67□□□□□ -0.06
SYNPO-205ENST00000522122 YY1AP1Q9H869 796 aa14.67□□□□□ -0.06
SYNPO-205ENST00000522122 STOML1Q9UBI4 398 aa14.67□□□□□ -0.06
SYNPO-205ENST00000522122 PCSK1NQ9UHG2 260 aa14.67□□□□□ -0.06
SYNPO-205ENST00000522122 FAF1Q9UNN5 650 aaPredicted RBP14.67□□□□□ -0.06
SYNPO-205ENST00000522122 DYNC1LI1Q9Y6G9 523 aaKnown RBP14.67□□□□□ -0.06
SYNPO-205ENST00000522122 SNRNP48Q6IEG0 339 aaKnown RBP14.67□□□□□ -0.06
SYNPO-205ENST00000522122 INTS5Q6P9B9 1019 aaKnown RBP14.67□□□□□ -0.06
SYNPO-205ENST00000522122 PACS2Q86VP3 889 aa14.67□□□□□ -0.06
SYNPO-205ENST00000522122 LDHDQ86WU2 507 aa14.67□□□□□ -0.06
SYNPO-205ENST00000522122 GPD1LQ8N335 351 aa14.67□□□□□ -0.06
SYNPO-205ENST00000522122 MYCBPAPQ8TBZ2 947 aa14.67□□□□□ -0.06
SYNPO-205ENST00000522122 PSPC1Q8WXF1 523 aaKnown RBP14.67□□□□□ -0.06
SYNPO-205ENST00000522122 TRIM51Q9BSJ1 452 aa14.67□□□□□ -0.06
SYNPO-205ENST00000522122 TRAIPQ9BWF2 469 aa14.67□□□□□ -0.06
SYNPO-205ENST00000522122 DCTN4Q9UJW0 460 aa14.67□□□□□ -0.06
SYNPO-205ENST00000522122 GOLGA8CPA6NN73 597 aa14.66□□□□□ -0.06
SYNPO-205ENST00000522122 CES2O00748 559 aa14.66□□□□□ -0.06
SYNPO-205ENST00000522122 CFLARO15519 480 aa14.66□□□□□ -0.06
SYNPO-205ENST00000522122 SLC37A4O43826 429 aa14.66□□□□□ -0.06
SYNPO-205ENST00000522122 HAUS5O94927 633 aa14.66□□□□□ -0.06
SYNPO-205ENST00000522122 HP1BP3Q5SSJ5 553 aaPredicted RBP14.66□□□□□ -0.06
SYNPO-205ENST00000522122 METTL23Q86XA0 190 aa14.66□□□□□ -0.06
SYNPO-205ENST00000522122 ZBED8Q8IZ13 594 aa14.66□□□□□ -0.06
SYNPO-205ENST00000522122 PDZD8Q8NEN9 1154 aa14.66□□□□□ -0.06
SYNPO-205ENST00000522122 SPDL1Q96EA4 605 aa14.66□□□□□ -0.06
SYNPO-205ENST00000522122 MTRQ99707 1265 aa14.66□□□□□ -0.06
SYNPO-205ENST00000522122 CHN1P15882 459 aa14.66□□□□□ -0.06
SYNPO-205ENST00000522122 FGFR4P22455 802 aa14.66□□□□□ -0.06
SYNPO-205ENST00000522122 CNGA1P29973 690 aa14.66□□□□□ -0.06
SYNPO-205ENST00000522122 PDE1CQ14123 709 aaPredicted RBP14.66□□□□□ -0.06
SYNPO-205ENST00000522122 WDR59Q6PJI9 974 aa14.66□□□□□ -0.06
SYNPO-205ENST00000522122 ATP11CQ8NB49 1132 aa14.66□□□□□ -0.06
SYNPO-205ENST00000522122 ACTRT1Q8TDG2 376 aa14.66□□□□□ -0.06
SYNPO-205ENST00000522122 VCPKMTQ9H867 229 aa14.66□□□□□ -0.06
SYNPO-205ENST00000522122 HOXC10Q9NYD6 342 aa14.66□□□□□ -0.06
SYNPO-205ENST00000522122 FBXO40Q9UH90 709 aa14.66□□□□□ -0.06
SYNPO-205ENST00000522122 HSPA9P38646 679 aaKnown RBP14.66□□□□□ -0.06
SYNPO-205ENST00000522122 SEC24CP53992 1094 aa14.66□□□□□ -0.06
SYNPO-205ENST00000522122 ZNF568Q3ZCX4 644 aa14.66□□□□□ -0.06
SYNPO-205ENST00000522122 CLEC10AQ8IUN9 316 aa14.66□□□□□ -0.06
SYNPO-205ENST00000522122 PPM1NQ8N819 430 aa14.66□□□□□ -0.06
SYNPO-205ENST00000522122 TPCN2Q8NHX9 752 aa14.66□□□□□ -0.06
SYNPO-205ENST00000522122 SLC40A1Q9NP59 571 aa14.66□□□□□ -0.06
SYNPO-205ENST00000522122 CYP26B1Q9NR63 512 aa14.66□□□□□ -0.06
SYNPO-205ENST00000522122 SLC9A2Q9UBY0 812 aa14.66□□□□□ -0.06
SYNPO-205ENST00000522122 FIS1Q9Y3D6 152 aa14.66□□□□□ -0.06
SYNPO-205ENST00000522122 PCDHA10Q9Y5I2 948 aa14.66□□□□□ -0.06
SYNPO-205ENST00000522122 PSMC1P62191 440 aaKnown RBP14.66□□□□□ -0.06
SYNPO-205ENST00000522122 STAT4Q14765 748 aa14.66□□□□□ -0.06
SYNPO-205ENST00000522122 RSPH3Q86UC2 560 aa14.66□□□□□ -0.06
SYNPO-205ENST00000522122 CYTH2Q99418 400 aa14.66□□□□□ -0.06
SYNPO-205ENST00000522122 UVRAGQ9P2Y5 699 aa14.66□□□□□ -0.06
SYNPO-205ENST00000522122 APOBEC2Q9Y235 224 aaKnown RBP14.66□□□□□ -0.06
SYNPO-205ENST00000522122 KIF1CO43896 1103 aaKnown RBP14.65□□□□□ -0.06
SYNPO-205ENST00000522122 MKRN3Q13064 507 aaKnown RBP14.65□□□□□ -0.06
SYNPO-205ENST00000522122 IL17AQ16552 155 aa14.65□□□□□ -0.06
SYNPO-205ENST00000522122 TBC1D16Q8TBP0 767 aa14.65□□□□□ -0.06
SYNPO-205ENST00000522122 ECT2Q9H8V3 914 aa14.65□□□□□ -0.06
SYNPO-205ENST00000522122 REXO2Q9Y3B8 237 aaKnown RBP14.65□□□□□ -0.06
SYNPO-205ENST00000522122 HSPA4LO95757 839 aa14.65□□□□□ -0.06
SYNPO-205ENST00000522122 TMEM253P0C7T8 217 aa14.65□□□□□ -0.06
SYNPO-205ENST00000522122 POLE2P56282 527 aa14.65□□□□□ -0.06
SYNPO-205ENST00000522122 GRAMD1BQ3KR37 738 aa14.65□□□□□ -0.06
SYNPO-205ENST00000522122 RBAKQ9NYW8 714 aaPredicted RBP14.65□□□□□ -0.06
SYNPO-205ENST00000522122 AGO2Q9UKV8 859 aaKnown RBP14.65□□□□□ -0.06
SYNPO-205ENST00000522122 GLI1P08151 1106 aa14.65□□□□□ -0.06
SYNPO-205ENST00000522122 SLC1A1P43005 524 aa14.65□□□□□ -0.06
SYNPO-205ENST00000522122 SPP2Q13103 211 aa14.65□□□□□ -0.06
SYNPO-205ENST00000522122 ARL13BQ3SXY8 428 aa14.65□□□□□ -0.06
SYNPO-205ENST00000522122 TNFRSF25Q93038 417 aa14.65□□□□□ -0.06
SYNPO-205ENST00000522122 CLGNO14967 610 aa14.65□□□□□ -0.06
SYNPO-205ENST00000522122 KLRC4O43908 158 aa14.65□□□□□ -0.06
SYNPO-205ENST00000522122 NDUFB10O96000 172 aa14.65□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms