RNA–Protein interactions for RNA: ENST00000520957.1

CLK4-208, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best) BASIC

Gene CLK4, Length 1,690 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-208ENST00000520957 CACNG4Q9UBN1 327 aa13.53□□□□□ -0.24
CLK4-208ENST00000520957 GIT1Q9Y2X7 761 aa13.53□□□□□ -0.24
CLK4-208ENST00000520957 STYXL1Q9Y6J8 313 aa13.53□□□□□ -0.24
CLK4-208ENST00000520957 TRANK1O15050 2925 aa13.53□□□□□ -0.24
CLK4-208ENST00000520957 NT5C1B-RDH14C9J2C7 533 aa13.53□□□□□ -0.24
CLK4-208ENST00000520957 BIN1O00499 593 aa13.53□□□□□ -0.24
CLK4-208ENST00000520957 PTGESO14684 152 aa13.53□□□□□ -0.24
CLK4-208ENST00000520957 BMP6P22004 513 aa13.53□□□□□ -0.24
CLK4-208ENST00000520957 SCP2P22307 547 aa13.53□□□□□ -0.24
CLK4-208ENST00000520957 GRM5P41594 1212 aa13.53□□□□□ -0.24
CLK4-208ENST00000520957 ACOT2P49753 483 aa13.53□□□□□ -0.24
CLK4-208ENST00000520957 SPAG1Q07617 926 aa13.53□□□□□ -0.24
CLK4-208ENST00000520957 PSMD2Q13200 908 aa13.53□□□□□ -0.24
CLK4-208ENST00000520957 KCNB1Q14721 858 aa13.53□□□□□ -0.24
CLK4-208ENST00000520957 SLC10A6Q3KNW5 377 aa13.53□□□□□ -0.24
CLK4-208ENST00000520957 EPC2Q52LR7 807 aa13.53□□□□□ -0.24
CLK4-208ENST00000520957 GLRA4Q5JXX5 417 aa13.53□□□□□ -0.24
CLK4-208ENST00000520957 DEFB123Q8N688 67 aa13.53□□□□□ -0.24
CLK4-208ENST00000520957 RABGGTAQ92696 567 aa13.53□□□□□ -0.24
CLK4-208ENST00000520957 CLP1Q92989 425 aaKnown RBP13.53□□□□□ -0.24
CLK4-208ENST00000520957 HVCN1Q96D96 273 aa13.53□□□□□ -0.24
CLK4-208ENST00000520957 ZMAT2Q96NC0 199 aaKnown RBP13.53□□□□□ -0.24
CLK4-208ENST00000520957 MSTO1Q9BUK6 570 aa13.53□□□□□ -0.24
CLK4-208ENST00000520957 PRDM12Q9H4Q4 367 aa13.53□□□□□ -0.24
CLK4-208ENST00000520957 DNAJB4Q9UDY4 337 aa13.53□□□□□ -0.24
CLK4-208ENST00000520957 GOLGA8IPA6NC78 632 aa13.52□□□□□ -0.25
CLK4-208ENST00000520957 GOLGA8JA6NMD2 632 aa13.52□□□□□ -0.25
CLK4-208ENST00000520957 CLIC2O15247 247 aa13.52□□□□□ -0.25
CLK4-208ENST00000520957 EIF3DO15371 548 aaKnown RBP eCLIP13.52□□□□□ -0.25
CLK4-208ENST00000520957 HOXA2O43364 376 aa13.52□□□□□ -0.25
CLK4-208ENST00000520957 IGFBP6P24592 240 aaPredicted RBP13.52□□□□□ -0.25
CLK4-208ENST00000520957 MCM4P33991 863 aa13.52□□□□□ -0.25
CLK4-208ENST00000520957 BMPR1AP36894 532 aa13.52□□□□□ -0.25
CLK4-208ENST00000520957 ERVK-21P61565 698 aa13.52□□□□□ -0.25
CLK4-208ENST00000520957 ALCAMQ13740 583 aa13.52□□□□□ -0.25
CLK4-208ENST00000520957 SPOUT1Q5T280 376 aaKnown RBP13.52□□□□□ -0.25
CLK4-208ENST00000520957 CRELD2Q6UXH1 353 aaPredicted RBP13.52□□□□□ -0.25
CLK4-208ENST00000520957 ALKAL1Q6UXT8 129 aa13.52□□□□□ -0.25
CLK4-208ENST00000520957 ELOA2Q8IYF1 753 aaPredicted RBP13.52□□□□□ -0.25
CLK4-208ENST00000520957 POMGNT1Q8WZA1 660 aa13.52□□□□□ -0.25
CLK4-208ENST00000520957 SMARCE1Q969G3 411 aa13.52□□□□□ -0.25
CLK4-208ENST00000520957 SAAL1Q96ER3 474 aa13.52□□□□□ -0.25
CLK4-208ENST00000520957 TGS1Q96RS0 853 aaKnown RBP13.52□□□□□ -0.25
CLK4-208ENST00000520957 NRDE2Q9H7Z3 1164 aa13.52□□□□□ -0.25
CLK4-208ENST00000520957 TMEM206Q9H813 350 aa13.52□□□□□ -0.25
CLK4-208ENST00000520957 RNF216Q9NWF9 866 aaPredicted RBP13.52□□□□□ -0.25
CLK4-208ENST00000520957 MAN1B1Q9UKM7 699 aa13.52□□□□□ -0.25
CLK4-208ENST00000520957 EXOC7Q9UPT5 735 aa13.52□□□□□ -0.25
CLK4-208ENST00000520957 F8W810 466 aa13.51□□□□□ -0.25
CLK4-208ENST00000520957 CXCL8P10145 99 aa13.51□□□□□ -0.25
CLK4-208ENST00000520957 ABCD1P33897 745 aa13.51□□□□□ -0.25
CLK4-208ENST00000520957 WNT7BP56706 349 aa13.51□□□□□ -0.25
CLK4-208ENST00000520957 RNASELQ05823 741 aaKnown RBP13.51□□□□□ -0.25
CLK4-208ENST00000520957 ENOX2Q16206 610 aaKnown RBP13.51□□□□□ -0.25
CLK4-208ENST00000520957 KNOP1Q1ED39 458 aaKnown RBP13.51□□□□□ -0.25
CLK4-208ENST00000520957 BMT2Q1RMZ1 405 aa13.51□□□□□ -0.25
CLK4-208ENST00000520957 ZNF697Q5TEC3 545 aa13.51□□□□□ -0.25
CLK4-208ENST00000520957 TMEM173Q86WV6 379 aaPredicted RBP13.51□□□□□ -0.25
CLK4-208ENST00000520957 CCDC34Q96HJ3 373 aa13.51□□□□□ -0.25
CLK4-208ENST00000520957 ACAP3Q96P50 834 aa13.51□□□□□ -0.25
CLK4-208ENST00000520957 GSDMAQ96QA5 445 aa13.51□□□□□ -0.25
CLK4-208ENST00000520957 CCDC94Q9BW85 323 aaPredicted RBP13.51□□□□□ -0.25
CLK4-208ENST00000520957 KCTD10Q9H3F6 313 aa13.51□□□□□ -0.25
CLK4-208ENST00000520957 ALG13Q9NP73 1137 aaKnown RBP13.51□□□□□ -0.25
CLK4-208ENST00000520957 UBN1Q9NPG3 1134 aa13.51□□□□□ -0.25
CLK4-208ENST00000520957 AGPAT3Q9NRZ7 376 aa13.51□□□□□ -0.25
CLK4-208ENST00000520957 AGO2Q9UKV8 859 aaKnown RBP13.51□□□□□ -0.25
CLK4-208ENST00000520957 SMIM28A0A1B0GU29 152 aa13.5□□□□□ -0.25
CLK4-208ENST00000520957 GOLGA6L22H0YM25 854 aa13.5□□□□□ -0.25
CLK4-208ENST00000520957 TULP1O00294 542 aaPredicted RBP13.5□□□□□ -0.25
CLK4-208ENST00000520957 OGTO15294 1046 aa13.5□□□□□ -0.25
CLK4-208ENST00000520957 INPPL1O15357 1258 aa13.5□□□□□ -0.25
CLK4-208ENST00000520957 ZC3H11AO75152 810 aaKnown RBP eCLIP13.5□□□□□ -0.25
CLK4-208ENST00000520957 SMC2O95347 1197 aa13.5□□□□□ -0.25
CLK4-208ENST00000520957 CTNNB1P35222 781 aa13.5□□□□□ -0.25
CLK4-208ENST00000520957 ADGRE1Q14246 886 aa13.5□□□□□ -0.25
CLK4-208ENST00000520957 NAB2Q15742 525 aa13.5□□□□□ -0.25
CLK4-208ENST00000520957 SLFN12LQ6IEE8 588 aa13.5□□□□□ -0.25
CLK4-208ENST00000520957 STXBP4Q6ZWJ1 553 aa13.5□□□□□ -0.25
CLK4-208ENST00000520957 HACE1Q8IYU2 909 aa13.5□□□□□ -0.25
CLK4-208ENST00000520957 LRRC43Q8N309 656 aa13.5□□□□□ -0.25
CLK4-208ENST00000520957 NOC3LQ8WTT2 800 aaKnown RBP13.5□□□□□ -0.25
CLK4-208ENST00000520957 PAAF1Q9BRP4 392 aa13.5□□□□□ -0.25
CLK4-208ENST00000520957 FAM213AQ9BRX8 229 aa13.5□□□□□ -0.25
CLK4-208ENST00000520957 CLSTN2Q9H4D0 955 aa13.5□□□□□ -0.25
CLK4-208ENST00000520957 CPSF3Q9UKF6 684 aaKnown RBP13.5□□□□□ -0.25
CLK4-208ENST00000520957 PRUNE2Q8WUY3 3088 aa13.5□□□□□ -0.25
CLK4-208ENST00000520957 COL6A3P12111 3177 aa13.5□□□□□ -0.25
CLK4-208ENST00000520957 MYH11P35749 1972 aa13.5□□□□□ -0.25
CLK4-208ENST00000520957 LACTBL1A8MY62 500 aa13.5□□□□□ -0.25
CLK4-208ENST00000520957 CSPG5O95196 566 aa13.5□□□□□ -0.25
CLK4-208ENST00000520957 GALTP07902 379 aa13.5□□□□□ -0.25
CLK4-208ENST00000520957 CLTAP09496 248 aa13.5□□□□□ -0.25
CLK4-208ENST00000520957 CD44P16070 742 aaKnown RBP13.5□□□□□ -0.25
CLK4-208ENST00000520957 PRCPP42785 496 aa13.5□□□□□ -0.25
CLK4-208ENST00000520957 SLC11A1P49279 550 aa13.5□□□□□ -0.25
CLK4-208ENST00000520957 BCAR1P56945 870 aa13.5□□□□□ -0.25
CLK4-208ENST00000520957 XKR4Q5GH76 650 aa13.5□□□□□ -0.25
CLK4-208ENST00000520957 KCNT2Q6UVM3 1135 aa13.5□□□□□ -0.25
CLK4-208ENST00000520957 APBB1IPQ7Z5R6 666 aaPredicted RBP13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms