RNA–Protein interactions for RNA: ENST00000520889.1

IGHV4-55-201, Transcript of immunoglobulin heavy variable 4-55 (pseudogene), humanhuman

BASIC

Gene IGHV4-55, Length 368 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV4-55-201ENST00000520889 ARMCX5Q6P1M9 558 aa6.94□□□□□ -1.3
IGHV4-55-201ENST00000520889 ALKAL1Q6UXT8 129 aa6.94□□□□□ -1.3
IGHV4-55-201ENST00000520889 CMTR2Q8IYT2 770 aaKnown RBP6.94□□□□□ -1.3
IGHV4-55-201ENST00000520889 TDHQ8IZJ6 230 aa6.94□□□□□ -1.3
IGHV4-55-201ENST00000520889 GLIS3Q8NEA6 775 aa6.94□□□□□ -1.3
IGHV4-55-201ENST00000520889 SP7Q8TDD2 431 aaPredicted RBP6.94□□□□□ -1.3
IGHV4-55-201ENST00000520889 NOC3LQ8WTT2 800 aaKnown RBP6.94□□□□□ -1.3
IGHV4-55-201ENST00000520889 POMGNT1Q8WZA1 660 aa6.94□□□□□ -1.3
IGHV4-55-201ENST00000520889 ERCC4Q92889 916 aaPredicted RBP6.94□□□□□ -1.3
IGHV4-55-201ENST00000520889 ZNF689Q96CS4 500 aaPredicted RBP6.94□□□□□ -1.3
IGHV4-55-201ENST00000520889 CPB2Q96IY4 423 aa6.94□□□□□ -1.3
IGHV4-55-201ENST00000520889 ACAP3Q96P50 834 aa6.94□□□□□ -1.3
IGHV4-55-201ENST00000520889 FUCA2Q9BTY2 467 aa6.94□□□□□ -1.3
IGHV4-55-201ENST00000520889 MSTO1Q9BUK6 570 aa6.94□□□□□ -1.3
IGHV4-55-201ENST00000520889 MRPL9Q9BYD2 267 aaKnown RBP6.94□□□□□ -1.3
IGHV4-55-201ENST00000520889 UBE2OQ9C0C9 1292 aaKnown RBP6.94□□□□□ -1.3
IGHV4-55-201ENST00000520889 NAT10Q9H0A0 1025 aaKnown RBP6.94□□□□□ -1.3
IGHV4-55-201ENST00000520889 TMEM117Q9H0C3 514 aa6.94□□□□□ -1.3
IGHV4-55-201ENST00000520889 SEMA6BQ9H3T3 888 aa6.94□□□□□ -1.3
IGHV4-55-201ENST00000520889 HSPBP1Q9NZL4 362 aa6.94□□□□□ -1.3
IGHV4-55-201ENST00000520889 AGO2Q9UKV8 859 aaKnown RBP6.94□□□□□ -1.3
IGHV4-55-201ENST00000520889 LRFN2Q9ULH4 789 aa6.94□□□□□ -1.3
IGHV4-55-201ENST00000520889 DERAQ9Y315 318 aa6.94□□□□□ -1.3
IGHV4-55-201ENST00000520889 INSL6Q9Y581 213 aa6.94□□□□□ -1.3
IGHV4-55-201ENST00000520889 KIAA1671Q9BY89 1806 aa6.93□□□□□ -1.3
IGHV4-55-201ENST00000520889 TTC26A0AVF1 554 aa6.93□□□□□ -1.3
IGHV4-55-201ENST00000520889 ZNF233A6NK53 670 aa6.93□□□□□ -1.3
IGHV4-55-201ENST00000520889 BIN1O00499 593 aa6.93□□□□□ -1.3
IGHV4-55-201ENST00000520889 IKBKBO14920 756 aa6.93□□□□□ -1.3
IGHV4-55-201ENST00000520889 CETN3O15182 167 aa6.93□□□□□ -1.3
IGHV4-55-201ENST00000520889 XPOTO43592 962 aaKnown RBP6.93□□□□□ -1.3
IGHV4-55-201ENST00000520889 NPTXRO95502 500 aa6.93□□□□□ -1.3
IGHV4-55-201ENST00000520889 NR3C1P04150 777 aa6.93□□□□□ -1.3
IGHV4-55-201ENST00000520889 KCNE1P15382 129 aa6.93□□□□□ -1.3
IGHV4-55-201ENST00000520889 CD44P16070 742 aaKnown RBP6.93□□□□□ -1.3
IGHV4-55-201ENST00000520889 CYP3A5P20815 502 aa6.93□□□□□ -1.3
IGHV4-55-201ENST00000520889 NR2F2P24468 414 aa6.93□□□□□ -1.3
IGHV4-55-201ENST00000520889 PSMC2P35998 433 aaKnown RBP6.93□□□□□ -1.3
IGHV4-55-201ENST00000520889 CLDN10P78369 228 aa6.93□□□□□ -1.3
IGHV4-55-201ENST00000520889 GRIK3Q13003 919 aa6.93□□□□□ -1.3
IGHV4-55-201ENST00000520889 ADAM9Q13443 819 aa6.93□□□□□ -1.3
IGHV4-55-201ENST00000520889 SHHQ15465 462 aa6.93□□□□□ -1.3
IGHV4-55-201ENST00000520889 DPCR1Q3MIW9 517 aa6.93□□□□□ -1.3
IGHV4-55-201ENST00000520889 ZSCAN23Q3MJ62 389 aa6.93□□□□□ -1.3
IGHV4-55-201ENST00000520889 LRIT3Q3SXY7 679 aa6.93□□□□□ -1.3
IGHV4-55-201ENST00000520889 PRPF38BQ5VTL8 546 aaKnown RBP6.93□□□□□ -1.3
IGHV4-55-201ENST00000520889 TTI2Q6NXR4 508 aa6.93□□□□□ -1.3
IGHV4-55-201ENST00000520889 GLB1LQ6UWU2 654 aa6.93□□□□□ -1.3
IGHV4-55-201ENST00000520889 CRELD2Q6UXH1 353 aaPredicted RBP6.93□□□□□ -1.3
IGHV4-55-201ENST00000520889 LIN28BQ6ZN17 250 aaKnown RBP eCLIP6.93□□□□□ -1.3
IGHV4-55-201ENST00000520889 AGMOQ6ZNB7 445 aa6.93□□□□□ -1.3
IGHV4-55-201ENST00000520889 INTS8Q75QN2 995 aaKnown RBP6.93□□□□□ -1.3
IGHV4-55-201ENST00000520889 OTOP2Q7RTS6 562 aa6.93□□□□□ -1.3
IGHV4-55-201ENST00000520889 FILIP1Q7Z7B0 1213 aa6.93□□□□□ -1.3
IGHV4-55-201ENST00000520889 HERC6Q8IVU3 1022 aa6.93□□□□□ -1.3
IGHV4-55-201ENST00000520889 BRSK2Q8IWQ3 736 aa6.93□□□□□ -1.3
IGHV4-55-201ENST00000520889 NELFCDQ8IXH7 590 aa6.93□□□□□ -1.3
IGHV4-55-201ENST00000520889 ENOX1Q8TC92 643 aaKnown RBP6.93□□□□□ -1.3
IGHV4-55-201ENST00000520889 TMC2Q8TDI7 906 aa6.93□□□□□ -1.3
IGHV4-55-201ENST00000520889 NELFBQ8WX92 580 aa6.93□□□□□ -1.3
IGHV4-55-201ENST00000520889 ZBTB45Q96K62 511 aaPredicted RBP6.93□□□□□ -1.3
IGHV4-55-201ENST00000520889 RNPC3Q96LT9 517 aaKnown RBP6.93□□□□□ -1.3
IGHV4-55-201ENST00000520889 MFSD14AQ96MC6 490 aa6.93□□□□□ -1.3
IGHV4-55-201ENST00000520889 RAD9AQ99638 391 aa6.93□□□□□ -1.3
IGHV4-55-201ENST00000520889 CBWD1Q9BRT8 395 aa6.93□□□□□ -1.3
IGHV4-55-201ENST00000520889 EIF2AQ9BY44 585 aaKnown RBP6.93□□□□□ -1.3
IGHV4-55-201ENST00000520889 HAPLN2Q9GZV7 340 aa6.93□□□□□ -1.3
IGHV4-55-201ENST00000520889 RSAD1Q9HA92 442 aa6.93□□□□□ -1.3
IGHV4-55-201ENST00000520889 METTL14Q9HCE5 456 aaKnown RBP6.93□□□□□ -1.3
IGHV4-55-201ENST00000520889 SLC38A7Q9NVC3 462 aa6.93□□□□□ -1.3
IGHV4-55-201ENST00000520889 CNTN3Q9P232 1028 aa6.93□□□□□ -1.3
IGHV4-55-201ENST00000520889 ANKFY1Q9P2R3 1169 aa6.93□□□□□ -1.3
IGHV4-55-201ENST00000520889 STK39Q9UEW8 545 aa6.93□□□□□ -1.3
IGHV4-55-201ENST00000520889 FRMD4BQ9Y2L6 1034 aa6.93□□□□□ -1.3
IGHV4-55-201ENST00000520889 RWDD3Q9Y3V2 267 aa6.93□□□□□ -1.3
IGHV4-55-201ENST00000520889 C2CD2Q9Y426 696 aa6.93□□□□□ -1.3
IGHV4-55-201ENST00000520889 PCDHA11Q9Y5I1 949 aa6.93□□□□□ -1.3
IGHV4-55-201ENST00000520889 TMEM265A0A087WTH1 108 aa6.92□□□□□ -1.3
IGHV4-55-201ENST00000520889 ZBBXA8MT70 800 aa6.92□□□□□ -1.3
IGHV4-55-201ENST00000520889 SMTNL1A8MU46 457 aa6.92□□□□□ -1.3
IGHV4-55-201ENST00000520889 PMM2O15305 246 aa6.92□□□□□ -1.3
IGHV4-55-201ENST00000520889 STX10O60499 249 aa6.92□□□□□ -1.3
IGHV4-55-201ENST00000520889 EXOC3O60645 756 aa6.92□□□□□ -1.3
IGHV4-55-201ENST00000520889 OFD1O75665 1012 aa6.92□□□□□ -1.3
IGHV4-55-201ENST00000520889 CAPN15O75808 1086 aa6.92□□□□□ -1.3
IGHV4-55-201ENST00000520889 RECQL4O94761 1208 aa6.92□□□□□ -1.3
IGHV4-55-201ENST00000520889 ATP2A2P16615 1042 aaKnown RBP6.92□□□□□ -1.3
IGHV4-55-201ENST00000520889 GTF2H1P32780 548 aa6.92□□□□□ -1.3
IGHV4-55-201ENST00000520889 MATR3P43243 847 aaKnown RBP eCLIP6.92□□□□□ -1.3
IGHV4-55-201ENST00000520889 ZNF445P59923 1031 aa6.92□□□□□ -1.3
IGHV4-55-201ENST00000520889 SMAD3P84022 425 aaKnown RBP6.92□□□□□ -1.3
IGHV4-55-201ENST00000520889 PPP2R3AQ06190 1150 aa6.92□□□□□ -1.3
IGHV4-55-201ENST00000520889 TYRO3Q06418 890 aa6.92□□□□□ -1.3
IGHV4-55-201ENST00000520889 PSMD6Q15008 389 aa6.92□□□□□ -1.3
IGHV4-55-201ENST00000520889 RAB30Q15771 203 aa6.92□□□□□ -1.3
IGHV4-55-201ENST00000520889 ZBTB6Q15916 424 aa6.92□□□□□ -1.3
IGHV4-55-201ENST00000520889 SNRNP35Q16560 246 aaKnown RBP6.92□□□□□ -1.3
IGHV4-55-201ENST00000520889 SLC10A6Q3KNW5 377 aa6.92□□□□□ -1.3
IGHV4-55-201ENST00000520889 C9orf50Q5SZB4 431 aa6.92□□□□□ -1.3
IGHV4-55-201ENST00000520889 SPATA1Q5VX52 437 aa6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms