RNA–Protein interactions for RNA: ENST00000520630.1

CSMD1-209, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 5

Gene CSMD1, Length 312 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-209ENST00000520630 SLC5A9Q2M3M2 681 aa8.96□□□□□ -0.98
CSMD1-209ENST00000520630 RTP2Q5QGT7 225 aa8.96□□□□□ -0.98
CSMD1-209ENST00000520630 TANGO2Q6ICL3 276 aa8.96□□□□□ -0.98
CSMD1-209ENST00000520630 PRSS55Q6UWB4 352 aaPredicted RBP8.96□□□□□ -0.98
CSMD1-209ENST00000520630 LRSAM1Q6UWE0 723 aa8.96□□□□□ -0.98
CSMD1-209ENST00000520630 UNQ6494/PRO21346Q6UXR6 183 aa8.96□□□□□ -0.98
CSMD1-209ENST00000520630 PRR23BQ6ZRT6 265 aa8.96□□□□□ -0.98
CSMD1-209ENST00000520630 DHX32Q7L7V1 743 aaKnown RBP8.96□□□□□ -0.98
CSMD1-209ENST00000520630 HSCBQ8IWL3 235 aa8.96□□□□□ -0.98
CSMD1-209ENST00000520630 ZNF710Q8N1W2 664 aa8.96□□□□□ -0.98
CSMD1-209ENST00000520630 FAM160A2Q8N612 972 aaPredicted RBP8.96□□□□□ -0.98
CSMD1-209ENST00000520630 PHKBQ93100 1093 aa8.96□□□□□ -0.98
CSMD1-209ENST00000520630 GJA10Q969M2 543 aa8.96□□□□□ -0.98
CSMD1-209ENST00000520630 ZFP42Q96MM3 310 aa8.96□□□□□ -0.98
CSMD1-209ENST00000520630 NELL2Q99435 816 aa8.96□□□□□ -0.98
CSMD1-209ENST00000520630 LZTS2Q9BRK4 669 aa8.96□□□□□ -0.98
CSMD1-209ENST00000520630 PAAF1Q9BRP4 392 aa8.96□□□□□ -0.98
CSMD1-209ENST00000520630 PHF20Q9BVI0 1012 aa8.96□□□□□ -0.98
CSMD1-209ENST00000520630 AGXT2Q9BYV1 514 aa8.96□□□□□ -0.98
CSMD1-209ENST00000520630 GCOM2Q9BZD3 368 aaPredicted RBP8.96□□□□□ -0.98
CSMD1-209ENST00000520630 PDRG1Q9NUG6 133 aa8.96□□□□□ -0.98
CSMD1-209ENST00000520630 DNMT3BQ9UBC3 853 aaKnown RBP8.96□□□□□ -0.98
CSMD1-209ENST00000520630 CCL16O15467 120 aa8.95□□□□□ -0.98
CSMD1-209ENST00000520630 KCNK5O95279 499 aa8.95□□□□□ -0.98
CSMD1-209ENST00000520630 ZIC2O95409 532 aaPredicted RBP8.95□□□□□ -0.98
CSMD1-209ENST00000520630 FOSP01100 380 aaPredicted RBP8.95□□□□□ -0.98
CSMD1-209ENST00000520630 HMGB1P09429 215 aaKnown RBP8.95□□□□□ -0.98
CSMD1-209ENST00000520630 CHRNB1P11230 501 aa8.95□□□□□ -0.98
CSMD1-209ENST00000520630 SKIP12755 728 aa8.95□□□□□ -0.98
CSMD1-209ENST00000520630 IGFBP6P24592 240 aaPredicted RBP8.95□□□□□ -0.98
CSMD1-209ENST00000520630 OR1G1P47890 313 aa8.95□□□□□ -0.98
CSMD1-209ENST00000520630 MCM2P49736 904 aa8.95□□□□□ -0.98
CSMD1-209ENST00000520630 RAB27AP51159 221 aa8.95□□□□□ -0.98
CSMD1-209ENST00000520630 RING1Q06587 406 aa8.95□□□□□ -0.98
CSMD1-209ENST00000520630 SIM2Q14190 667 aaPredicted RBP8.95□□□□□ -0.98
CSMD1-209ENST00000520630 ZNF852Q6ZMS4 543 aa8.95□□□□□ -0.98
CSMD1-209ENST00000520630 MTSS1LQ765P7 747 aa8.95□□□□□ -0.98
CSMD1-209ENST00000520630 SMAP1Q8IYB5 467 aaPredicted RBP8.95□□□□□ -0.98
CSMD1-209ENST00000520630 FBXL16Q8N461 479 aa8.95□□□□□ -0.98
CSMD1-209ENST00000520630 ING5Q8WYH8 240 aa8.95□□□□□ -0.98
CSMD1-209ENST00000520630 GATA6Q92908 595 aa8.95□□□□□ -0.98
CSMD1-209ENST00000520630 FAM167AQ96KS9 214 aa8.95□□□□□ -0.98
CSMD1-209ENST00000520630 TCEANC2Q96MN5 208 aa8.95□□□□□ -0.98
CSMD1-209ENST00000520630 GAD1Q99259 594 aa8.95□□□□□ -0.98
CSMD1-209ENST00000520630 ZNF577Q9BSK1 485 aa8.95□□□□□ -0.98
CSMD1-209ENST00000520630 LSM14BQ9BX40 385 aaKnown RBP8.95□□□□□ -0.98
CSMD1-209ENST00000520630 EIF2AQ9BY44 585 aaKnown RBP8.95□□□□□ -0.98
CSMD1-209ENST00000520630 NIFKQ9BYG3 293 aaKnown RBP8.95□□□□□ -0.98
CSMD1-209ENST00000520630 TBC1D22BQ9NU19 505 aa8.95□□□□□ -0.98
CSMD1-209ENST00000520630 STK39Q9UEW8 545 aa8.95□□□□□ -0.98
CSMD1-209ENST00000520630 NDRG2Q9UN36 371 aaKnown RBP8.95□□□□□ -0.98
CSMD1-209ENST00000520630 SSX2IPQ9Y2D8 614 aa8.95□□□□□ -0.98
CSMD1-209ENST00000520630 HES2Q9Y543 173 aa8.95□□□□□ -0.98
CSMD1-209ENST00000520630 MYH11P35749 1972 aa8.95□□□□□ -0.98
CSMD1-209ENST00000520630 TENM4Q6N022 2769 aa8.95□□□□□ -0.98
CSMD1-209ENST00000520630 SMCO2A6NFE2 343 aa8.94□□□□□ -0.98
CSMD1-209ENST00000520630 ARL5CA6NH57 179 aa8.94□□□□□ -0.98
CSMD1-209ENST00000520630 SOBPA7XYQ1 873 aa8.94□□□□□ -0.98
CSMD1-209ENST00000520630 TAF4O00268 1085 aa8.94□□□□□ -0.98
CSMD1-209ENST00000520630 ECI2O75521 394 aa8.94□□□□□ -0.98
CSMD1-209ENST00000520630 LARGE1O95461 756 aa8.94□□□□□ -0.98
CSMD1-209ENST00000520630 SFPQP23246 707 aaKnown RBP eCLIP8.94□□□□□ -0.98
CSMD1-209ENST00000520630 GNAQP50148 359 aa8.94□□□□□ -0.98
CSMD1-209ENST00000520630 SCNN1GP51170 649 aa8.94□□□□□ -0.98
CSMD1-209ENST00000520630 PFKPQ01813 784 aa8.94□□□□□ -0.98
CSMD1-209ENST00000520630 SART3Q15020 963 aaKnown RBP8.94□□□□□ -0.98
CSMD1-209ENST00000520630 MTERF2Q49AM1 385 aa8.94□□□□□ -0.98
CSMD1-209ENST00000520630 JAKMIP3Q5VZ66 844 aa8.94□□□□□ -0.98
CSMD1-209ENST00000520630 FUT10Q6P4F1 479 aa8.94□□□□□ -0.98
CSMD1-209ENST00000520630 B3GNT9Q6UX72 402 aa8.94□□□□□ -0.98
CSMD1-209ENST00000520630 Q6ZUG5 572 aa8.94□□□□□ -0.98
CSMD1-209ENST00000520630 CATSPER4Q7RTX7 472 aa8.94□□□□□ -0.98
CSMD1-209ENST00000520630 RALYLQ86SE5 291 aaKnown RBP8.94□□□□□ -0.98
CSMD1-209ENST00000520630 RHPN2Q8IUC4 686 aa8.94□□□□□ -0.98
CSMD1-209ENST00000520630 GPR65Q8IYL9 337 aa8.94□□□□□ -0.98
CSMD1-209ENST00000520630 ZNF579Q8NAF0 562 aaKnown RBP8.94□□□□□ -0.98
CSMD1-209ENST00000520630 FANCBQ8NB91 859 aa8.94□□□□□ -0.98
CSMD1-209ENST00000520630 LNX1Q8TBB1 728 aaPredicted RBP8.94□□□□□ -0.98
CSMD1-209ENST00000520630 URGCPQ8TCY9 931 aa8.94□□□□□ -0.98
CSMD1-209ENST00000520630 PGBD4Q96DM1 585 aa8.94□□□□□ -0.98
CSMD1-209ENST00000520630 TMX3Q96JJ7 454 aa8.94□□□□□ -0.98
CSMD1-209ENST00000520630 SCLT1Q96NL6 688 aa8.94□□□□□ -0.98
CSMD1-209ENST00000520630 FAM193BQ96PV7 902 aaPredicted RBP8.94□□□□□ -0.98
CSMD1-209ENST00000520630 LRRC2Q9BYS8 371 aa8.94□□□□□ -0.98
CSMD1-209ENST00000520630 CXCL16Q9H2A7 254 aa8.94□□□□□ -0.98
CSMD1-209ENST00000520630 SMOC1Q9H4F8 434 aa8.94□□□□□ -0.98
CSMD1-209ENST00000520630 LMAN1LQ9HAT1 526 aa8.94□□□□□ -0.98
CSMD1-209ENST00000520630 DISC1Q9NRI5 854 aa8.94□□□□□ -0.98
CSMD1-209ENST00000520630 KANSL3Q9P2N6 904 aa8.94□□□□□ -0.98
CSMD1-209ENST00000520630 DPP7Q9UHL4 492 aa8.94□□□□□ -0.98
CSMD1-209ENST00000520630 CNTNAP2Q9UHC6 1331 aa8.94□□□□□ -0.98
CSMD1-209ENST00000520630 NAV2Q8IVL1 2488 aa8.94□□□□□ -0.98
CSMD1-209ENST00000520630 TCHHQ07283 1943 aa8.93□□□□□ -0.98
CSMD1-209ENST00000520630 ASXL3Q9C0F0 2248 aa8.93□□□□□ -0.98
CSMD1-209ENST00000520630 ACACAQ13085 2346 aa8.93□□□□□ -0.98
CSMD1-209ENST00000520630 MAST4O15021 2626 aa8.93□□□□□ -0.98
CSMD1-209ENST00000520630 CYSRT1A8MQ03 144 aa8.93□□□□□ -0.98
CSMD1-209ENST00000520630 NCAM2O15394 837 aa8.93□□□□□ -0.98
CSMD1-209ENST00000520630 MSH4O15457 936 aa8.93□□□□□ -0.98
CSMD1-209ENST00000520630 PRC1O43663 620 aa8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms