RNA–Protein interactions for RNA: ENST00000520602.5

MCF2-209, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene MCF2, Length 3,945 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-209ENST00000520602 BCORQ6W2J9 1755 aa10.89□□□□□ -0.67
MCF2-209ENST00000520602 NFKBIEO00221 500 aa10.88□□□□□ -0.67
MCF2-209ENST00000520602 OATP04181 439 aa10.88□□□□□ -0.67
MCF2-209ENST00000520602 SUPT20HL2P0C7V6 817 aa10.88□□□□□ -0.67
MCF2-209ENST00000520602 TXNP10599 105 aaKnown RBP10.88□□□□□ -0.67
MCF2-209ENST00000520602 ZNF568Q3ZCX4 644 aa10.88□□□□□ -0.67
MCF2-209ENST00000520602 SPOPLQ6IQ16 392 aa10.88□□□□□ -0.67
MCF2-209ENST00000520602 ANO5Q75V66 913 aa10.88□□□□□ -0.67
MCF2-209ENST00000520602 MGARPQ8TDB4 240 aa10.88□□□□□ -0.67
MCF2-209ENST00000520602 CASKIN2Q8WXE0 1202 aa10.88□□□□□ -0.67
MCF2-209ENST00000520602 ARHGEF26Q96DR7 871 aa10.88□□□□□ -0.67
MCF2-209ENST00000520602 VIPAS39Q9H9C1 493 aa10.88□□□□□ -0.67
MCF2-209ENST00000520602 SUCLA2Q9P2R7 463 aaPredicted RBP10.88□□□□□ -0.67
MCF2-209ENST00000520602 FBXL5Q9UKA1 691 aa10.88□□□□□ -0.67
MCF2-209ENST00000520602 SYNGAP1Q96PV0 1343 aa10.88□□□□□ -0.67
MCF2-209ENST00000520602 ADM5C9JUS6 153 aa10.88□□□□□ -0.67
MCF2-209ENST00000520602 ECEL1O95672 775 aa10.88□□□□□ -0.67
MCF2-209ENST00000520602 VIMP08670 466 aaKnown RBP10.88□□□□□ -0.67
MCF2-209ENST00000520602 TCF7P36402 384 aaPredicted RBP10.88□□□□□ -0.67
MCF2-209ENST00000520602 KCNJ1P48048 391 aa10.88□□□□□ -0.67
MCF2-209ENST00000520602 TEX2Q8IWB9 1127 aa10.88□□□□□ -0.67
MCF2-209ENST00000520602 RDM1Q8NG50 284 aa10.88□□□□□ -0.67
MCF2-209ENST00000520602 TRAF3IP1Q8TDR0 691 aaPredicted RBP10.88□□□□□ -0.67
MCF2-209ENST00000520602 RNF25Q96BH1 459 aaPredicted RBP10.88□□□□□ -0.67
MCF2-209ENST00000520602 MMP19Q99542 508 aa10.88□□□□□ -0.67
MCF2-209ENST00000520602 FEZ2Q9UHY8 353 aaPredicted RBP10.88□□□□□ -0.67
MCF2-209ENST00000520602 P4HA2O15460 535 aa10.88□□□□□ -0.67
MCF2-209ENST00000520602 ADRB2P07550 413 aa10.88□□□□□ -0.67
MCF2-209ENST00000520602 NR1D1P20393 614 aa10.88□□□□□ -0.67
MCF2-209ENST00000520602 ZSWIM2Q8NEG5 633 aa10.88□□□□□ -0.67
MCF2-209ENST00000520602 LNX1Q8TBB1 728 aaPredicted RBP10.88□□□□□ -0.67
MCF2-209ENST00000520602 NLRP7Q8WX94 980 aa10.88□□□□□ -0.67
MCF2-209ENST00000520602 CNKSR2Q8WXI2 1034 aa10.88□□□□□ -0.67
MCF2-209ENST00000520602 ANKRD36BP1Q96IX9 119 aa10.88□□□□□ -0.67
MCF2-209ENST00000520602 ZBTB45Q96K62 511 aaPredicted RBP10.88□□□□□ -0.67
MCF2-209ENST00000520602 ZIM3Q96PE6 472 aa10.88□□□□□ -0.67
MCF2-209ENST00000520602 MRPL47Q9HD33 250 aaKnown RBP10.88□□□□□ -0.67
MCF2-209ENST00000520602 CYP39A1Q9NYL5 469 aa10.88□□□□□ -0.67
MCF2-209ENST00000520602 PARP2Q9UGN5 583 aa10.88□□□□□ -0.67
MCF2-209ENST00000520602 PCDHGC5Q9Y5F6 944 aa10.88□□□□□ -0.67
MCF2-209ENST00000520602 MYH15Q9Y2K3 1946 aa10.87□□□□□ -0.67
MCF2-209ENST00000520602 PRKCIP41743 596 aa10.87□□□□□ -0.67
MCF2-209ENST00000520602 DYNLT1P63172 113 aa10.87□□□□□ -0.67
MCF2-209ENST00000520602 DNAJC24Q6P3W2 148 aa10.87□□□□□ -0.67
MCF2-209ENST00000520602 CCDC137Q6PK04 289 aaKnown RBP10.87□□□□□ -0.67
MCF2-209ENST00000520602 TRIM50Q86XT4 487 aa10.87□□□□□ -0.67
MCF2-209ENST00000520602 CHST13Q8NET6 341 aa10.87□□□□□ -0.67
MCF2-209ENST00000520602 PARD3BQ8TEW8 1205 aa10.87□□□□□ -0.67
MCF2-209ENST00000520602 HAUS1Q96CS2 278 aa10.87□□□□□ -0.67
MCF2-209ENST00000520602 MAK16Q9BXY0 300 aaKnown RBP10.87□□□□□ -0.67
MCF2-209ENST00000520602 FAM49AQ9H0Q0 323 aaPredicted RBP10.87□□□□□ -0.67
MCF2-209ENST00000520602 AJAP1Q9UKB5 411 aaPredicted RBP10.87□□□□□ -0.67
MCF2-209ENST00000520602 CD2APQ9Y5K6 639 aa10.87□□□□□ -0.67
MCF2-209ENST00000520602 MYH8P13535 1937 aa10.87□□□□□ -0.67
MCF2-209ENST00000520602 MAP2K7O14733 419 aa10.87□□□□□ -0.67
MCF2-209ENST00000520602 ATP2A1O14983 1001 aa10.87□□□□□ -0.67
MCF2-209ENST00000520602 CYP11B1P15538 503 aa10.87□□□□□ -0.67
MCF2-209ENST00000520602 ABCD1P33897 745 aa10.87□□□□□ -0.67
MCF2-209ENST00000520602 CCNA1P78396 465 aa10.87□□□□□ -0.67
MCF2-209ENST00000520602 DAW1Q8N136 415 aa10.87□□□□□ -0.67
MCF2-209ENST00000520602 MTMR14Q8NCE2 650 aa10.87□□□□□ -0.67
MCF2-209ENST00000520602 MAIP1Q8WWC4 291 aa10.87□□□□□ -0.67
MCF2-209ENST00000520602 TRIM11Q96F44 468 aa10.87□□□□□ -0.67
MCF2-209ENST00000520602 JPH2Q9BR39 696 aaPredicted RBP10.87□□□□□ -0.67
MCF2-209ENST00000520602 MRPL4Q9BYD3 311 aaKnown RBP10.87□□□□□ -0.67
MCF2-209ENST00000520602 RPF1Q9H9Y2 349 aaKnown RBP10.87□□□□□ -0.67
MCF2-209ENST00000520602 INTUQ9ULD6 942 aa10.87□□□□□ -0.67
MCF2-209ENST00000520602 HGSO14964 777 aaPredicted RBP10.87□□□□□ -0.67
MCF2-209ENST00000520602 FAM153BP0C7A2 387 aa10.87□□□□□ -0.67
MCF2-209ENST00000520602 ATF2P15336 505 aa10.87□□□□□ -0.67
MCF2-209ENST00000520602 HSPA6P17066 643 aa10.87□□□□□ -0.67
MCF2-209ENST00000520602 NCOA4Q13772 614 aa10.87□□□□□ -0.67
MCF2-209ENST00000520602 LY6KQ17RY6 165 aa10.87□□□□□ -0.67
MCF2-209ENST00000520602 FAM153CQ494X1 144 aa10.87□□□□□ -0.67
MCF2-209ENST00000520602 SCYL2Q6P3W7 929 aa10.87□□□□□ -0.67
MCF2-209ENST00000520602 TMEM161BQ8NDZ6 487 aa10.87□□□□□ -0.67
MCF2-209ENST00000520602 PRPF31Q8WWY3 499 aaKnown RBP10.87□□□□□ -0.67
MCF2-209ENST00000520602 FAM167AQ96KS9 214 aa10.87□□□□□ -0.67
MCF2-209ENST00000520602 FAM81BQ96LP2 452 aa10.87□□□□□ -0.67
MCF2-209ENST00000520602 FAM118BQ9BPY3 351 aa10.87□□□□□ -0.67
MCF2-209ENST00000520602 ADPGKQ9BRR6 497 aa10.87□□□□□ -0.67
MCF2-209ENST00000520602 STMN4Q9H169 189 aaPredicted RBP10.87□□□□□ -0.67
MCF2-209ENST00000520602 SLITRK6Q9H5Y7 841 aa10.87□□□□□ -0.67
MCF2-209ENST00000520602 FAM153AQ9UHL3 310 aa10.87□□□□□ -0.67
MCF2-209ENST00000520602 PFASO15067 1338 aa10.87□□□□□ -0.67
MCF2-209ENST00000520602 ZNF536O15090 1300 aa10.87□□□□□ -0.67
MCF2-209ENST00000520602 TLR3O15455 904 aaKnown RBP10.86□□□□□ -0.67
MCF2-209ENST00000520602 EXTL3O43909 919 aa10.86□□□□□ -0.67
MCF2-209ENST00000520602 CSDE1O75534 798 aaKnown RBP10.86□□□□□ -0.67
MCF2-209ENST00000520602 STAM2O75886 525 aa10.86□□□□□ -0.67
MCF2-209ENST00000520602 CYP24A1Q07973 514 aa10.86□□□□□ -0.67
MCF2-209ENST00000520602 ADCY1Q08828 1119 aa10.86□□□□□ -0.67
MCF2-209ENST00000520602 VGLL4Q14135 290 aa10.86□□□□□ -0.67
MCF2-209ENST00000520602 MYBPC2Q14324 1141 aa10.86□□□□□ -0.67
MCF2-209ENST00000520602 MOB2Q70IA6 237 aa10.86□□□□□ -0.67
MCF2-209ENST00000520602 SESTD1Q86VW0 696 aa10.86□□□□□ -0.67
MCF2-209ENST00000520602 TCP11Q8WWU5 503 aa10.86□□□□□ -0.67
MCF2-209ENST00000520602 C17orf75Q9HAS0 396 aa10.86□□□□□ -0.67
MCF2-209ENST00000520602 KLHL11Q9NVR0 708 aa10.86□□□□□ -0.67
MCF2-209ENST00000520602 NHSQ6T4R5 1651 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms