RNA–Protein interactions for RNA: ENST00000520520.1

CTNNA1-223, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 484 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-223ENST00000520520 PRDM12Q9H4Q4 367 aa9.33□□□□□ -0.92
CTNNA1-223ENST00000520520 CNOT10Q9H9A5 744 aaKnown RBP9.33□□□□□ -0.92
CTNNA1-223ENST00000520520 ACTR5Q9H9F9 607 aaPredicted RBP9.33□□□□□ -0.92
CTNNA1-223ENST00000520520 SPC25Q9HBM1 224 aa9.33□□□□□ -0.92
CTNNA1-223ENST00000520520 KCNMB3Q9NPA1 279 aa9.33□□□□□ -0.92
CTNNA1-223ENST00000520520 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.33□□□□□ -0.92
CTNNA1-223ENST00000520520 SUCLA2Q9P2R7 463 aaPredicted RBP9.33□□□□□ -0.92
CTNNA1-223ENST00000520520 RASAL2Q9UJF2 1139 aa9.33□□□□□ -0.92
CTNNA1-223ENST00000520520 ADAMTS5Q9UNA0 930 aa9.33□□□□□ -0.92
CTNNA1-223ENST00000520520 BAZ2BQ9UIF8 2168 aaKnown RBP9.33□□□□□ -0.92
CTNNA1-223ENST00000520520 MYH4Q9Y623 1939 aa9.33□□□□□ -0.92
CTNNA1-223ENST00000520520 NCANO14594 1321 aa9.32□□□□□ -0.92
CTNNA1-223ENST00000520520 POTEB3A0JP26 581 aa9.32□□□□□ -0.92
CTNNA1-223ENST00000520520 MOXD2PA6NHM9 499 aa9.32□□□□□ -0.92
CTNNA1-223ENST00000520520 SPDYE3A6NKU9 549 aa9.32□□□□□ -0.92
CTNNA1-223ENST00000520520 TMCO5BA8MYB1 307 aa9.32□□□□□ -0.92
CTNNA1-223ENST00000520520 MUTP22033 750 aa9.32□□□□□ -0.92
CTNNA1-223ENST00000520520 KLRC1P26715 233 aa9.32□□□□□ -0.92
CTNNA1-223ENST00000520520 LSP1P33241 339 aa9.32□□□□□ -0.92
CTNNA1-223ENST00000520520 CYP2C18P33260 490 aa9.32□□□□□ -0.92
CTNNA1-223ENST00000520520 COPB2P35606 906 aa9.32□□□□□ -0.92
CTNNA1-223ENST00000520520 STAT1P42224 750 aa9.32□□□□□ -0.92
CTNNA1-223ENST00000520520 CARSP49589 748 aaKnown RBP9.32□□□□□ -0.92
CTNNA1-223ENST00000520520 GTF2A1P52655 376 aaPredicted RBP9.32□□□□□ -0.92
CTNNA1-223ENST00000520520 SNAP25P60880 206 aa9.32□□□□□ -0.92
CTNNA1-223ENST00000520520 PPIGQ13427 754 aaKnown RBP eCLIP9.32□□□□□ -0.926e-8■□□□□ 10.9
CTNNA1-223ENST00000520520 PTGISQ16647 500 aa9.32□□□□□ -0.92
CTNNA1-223ENST00000520520 UBE2SQ16763 222 aa9.32□□□□□ -0.92
CTNNA1-223ENST00000520520 Q4G0T1 1027 aa9.32□□□□□ -0.92
CTNNA1-223ENST00000520520 GNASQ5JWF2 1037 aa9.32□□□□□ -0.92
CTNNA1-223ENST00000520520 CEP85LQ5SZL2 805 aa9.32□□□□□ -0.92
CTNNA1-223ENST00000520520 FOXR1Q6PIV2 292 aa9.32□□□□□ -0.92
CTNNA1-223ENST00000520520 POTEBQ6S5H4 581 aa9.32□□□□□ -0.92
CTNNA1-223ENST00000520520 ARMCX2Q7L311 632 aa9.32□□□□□ -0.92
CTNNA1-223ENST00000520520 TAX1BP1Q86VP1 789 aa9.32□□□□□ -0.92
CTNNA1-223ENST00000520520 NELFCDQ8IXH7 590 aa9.32□□□□□ -0.92
CTNNA1-223ENST00000520520 PRPF38AQ8NAV1 312 aaKnown RBP9.32□□□□□ -0.92
CTNNA1-223ENST00000520520 HDAC7Q8WUI4 952 aa9.32□□□□□ -0.92
CTNNA1-223ENST00000520520 CASKIN2Q8WXE0 1202 aa9.32□□□□□ -0.92
CTNNA1-223ENST00000520520 HAS1Q92839 578 aa9.32□□□□□ -0.92
CTNNA1-223ENST00000520520 RUNDC3BQ96NL0 473 aa9.32□□□□□ -0.92
CTNNA1-223ENST00000520520 GAS2L1Q99501 681 aaPredicted RBP9.32□□□□□ -0.92
CTNNA1-223ENST00000520520 TACO1Q9BSH4 297 aaKnown RBP9.32□□□□□ -0.92
CTNNA1-223ENST00000520520 TSEN34Q9BSV6 310 aaKnown RBP9.32□□□□□ -0.92
CTNNA1-223ENST00000520520 PBX4Q9BYU1 374 aa9.32□□□□□ -0.92
CTNNA1-223ENST00000520520 STMN4Q9H169 189 aaPredicted RBP9.32□□□□□ -0.92
CTNNA1-223ENST00000520520 YY1AP1Q9H869 796 aa9.32□□□□□ -0.92
CTNNA1-223ENST00000520520 SEL1LQ9UBV2 794 aa9.32□□□□□ -0.92
CTNNA1-223ENST00000520520 PARP2Q9UGN5 583 aa9.32□□□□□ -0.92
CTNNA1-223ENST00000520520 TMEM59LQ9UK28 342 aa9.32□□□□□ -0.92
CTNNA1-223ENST00000520520 PLAAQ9Y263 795 aa9.32□□□□□ -0.92
CTNNA1-223ENST00000520520 UTP11Q9Y3A2 253 aaKnown RBP9.32□□□□□ -0.92
CTNNA1-223ENST00000520520 NOC2LQ9Y3T9 749 aaKnown RBP9.32□□□□□ -0.92
CTNNA1-223ENST00000520520 LOXHD1Q8IVV2 1947 aa9.32□□□□□ -0.92
CTNNA1-223ENST00000520520 MCM3APO60318 1980 aa9.32□□□□□ -0.92
CTNNA1-223ENST00000520520 SYNGAP1Q96PV0 1343 aa9.31□□□□□ -0.92
CTNNA1-223ENST00000520520 A0A087X0T9 212 aa9.31□□□□□ -0.92
CTNNA1-223ENST00000520520 C11orf97A0A1B0GVM6 126 aaPredicted RBP9.31□□□□□ -0.92
CTNNA1-223ENST00000520520 KRIT1O00522 736 aa9.31□□□□□ -0.92
CTNNA1-223ENST00000520520 TLR3O15455 904 aaKnown RBP9.31□□□□□ -0.92
CTNNA1-223ENST00000520520 MEFVO15553 781 aaPredicted RBP9.31□□□□□ -0.92
CTNNA1-223ENST00000520520 RAD51CO43502 376 aa9.31□□□□□ -0.92
CTNNA1-223ENST00000520520 CEP104O60308 925 aa9.31□□□□□ -0.92
CTNNA1-223ENST00000520520 DUSP11O75319 330 aaKnown RBP9.31□□□□□ -0.92
CTNNA1-223ENST00000520520 FSBPO95073 299 aa9.31□□□□□ -0.92
CTNNA1-223ENST00000520520 FAM107AO95990 144 aa9.31□□□□□ -0.92
CTNNA1-223ENST00000520520 NR3C1P04150 777 aa9.31□□□□□ -0.92
CTNNA1-223ENST00000520520 GLI1P08151 1106 aa9.31□□□□□ -0.92
CTNNA1-223ENST00000520520 FAM228BP0C875 321 aa9.31□□□□□ -0.92
CTNNA1-223ENST00000520520 UCHL3P15374 230 aa9.31□□□□□ -0.92
CTNNA1-223ENST00000520520 RPA1P27694 616 aa9.31□□□□□ -0.92
CTNNA1-223ENST00000520520 MDH1P40925 334 aaKnown RBP9.31□□□□□ -0.92
CTNNA1-223ENST00000520520 GUCY2FP51841 1108 aa9.31□□□□□ -0.92
CTNNA1-223ENST00000520520 SLC12A3P55017 1021 aa9.31□□□□□ -0.92
CTNNA1-223ENST00000520520 CNTN2Q02246 1040 aa9.31□□□□□ -0.92
CTNNA1-223ENST00000520520 ARID5AQ03989 594 aa9.31□□□□□ -0.92
CTNNA1-223ENST00000520520 PDCLQ13371 301 aa9.31□□□□□ -0.92
CTNNA1-223ENST00000520520 ARSIQ5FYB1 569 aa9.31□□□□□ -0.92
CTNNA1-223ENST00000520520 DCAF17Q5H9S7 520 aaPredicted RBP9.31□□□□□ -0.92
CTNNA1-223ENST00000520520 TJAP1Q5JTD0 557 aa9.31□□□□□ -0.92
CTNNA1-223ENST00000520520 TMEM240Q5SV17 173 aa9.31□□□□□ -0.92
CTNNA1-223ENST00000520520 MFSD5Q6N075 450 aa9.31□□□□□ -0.92
CTNNA1-223ENST00000520520 ALKBH5Q6P6C2 394 aaKnown RBP9.31□□□□□ -0.92
CTNNA1-223ENST00000520520 CCDC174Q6PII3 467 aa9.31□□□□□ -0.92
CTNNA1-223ENST00000520520 ZNF365Q70YC5 407 aa9.31□□□□□ -0.92
CTNNA1-223ENST00000520520 EEPD1Q7L9B9 569 aa9.31□□□□□ -0.92
CTNNA1-223ENST00000520520 HS2ST1Q7LGA3 356 aa9.31□□□□□ -0.92
CTNNA1-223ENST00000520520 ANKRD33Q7Z3H0 272 aa9.31□□□□□ -0.92
CTNNA1-223ENST00000520520 KCNK18Q7Z418 384 aa9.31□□□□□ -0.92
CTNNA1-223ENST00000520520 CCDC50Q8IVM0 306 aa9.31□□□□□ -0.92
CTNNA1-223ENST00000520520 KLHL7Q8IXQ5 586 aa9.31□□□□□ -0.92
CTNNA1-223ENST00000520520 CNPY4Q8N129 248 aa9.31□□□□□ -0.92
CTNNA1-223ENST00000520520 RASGEF1CQ8N431 466 aa9.31□□□□□ -0.92
CTNNA1-223ENST00000520520 TMEM199Q8N511 208 aa9.31□□□□□ -0.92
CTNNA1-223ENST00000520520 SYT2Q8N9I0 419 aaPredicted RBP9.31□□□□□ -0.92
CTNNA1-223ENST00000520520 PCSK9Q8NBP7 692 aaKnown RBP9.31□□□□□ -0.92
CTNNA1-223ENST00000520520 KLHDC9Q8NEP7 349 aa9.31□□□□□ -0.92
CTNNA1-223ENST00000520520 CTNNBL1Q8WYA6 563 aaPredicted RBP9.31□□□□□ -0.92
CTNNA1-223ENST00000520520 ARL8AQ96BM9 186 aa9.31□□□□□ -0.92
CTNNA1-223ENST00000520520 MS4A14Q96JA4 679 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms