RNA–Protein interactions for RNA: ENST00000520451.1

CSMD1-207, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 2

Gene CSMD1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-207ENST00000520451 CREMQ03060 361 aa16.75■□□□□ 0.27
CSMD1-207ENST00000520451 TUSC3Q13454 348 aa16.75■□□□□ 0.27
CSMD1-207ENST00000520451 NBR1Q14596 966 aa16.75■□□□□ 0.27
CSMD1-207ENST00000520451 CYP26C1Q6V0L0 522 aa16.75■□□□□ 0.27
CSMD1-207ENST00000520451 HASPINQ8TF76 798 aa16.75■□□□□ 0.27
CSMD1-207ENST00000520451 SMG7Q92540 1137 aaKnown RBP16.75■□□□□ 0.27
CSMD1-207ENST00000520451 ZSCAN31Q96LW9 406 aaPredicted RBP16.75■□□□□ 0.27
CSMD1-207ENST00000520451 PAAF1Q9BRP4 392 aa16.75■□□□□ 0.27
CSMD1-207ENST00000520451 ADPGKQ9BRR6 497 aa16.75■□□□□ 0.27
CSMD1-207ENST00000520451 KIFC3Q9BVG8 833 aa16.75■□□□□ 0.27
CSMD1-207ENST00000520451 CCDC113Q9H0I3 377 aa16.75■□□□□ 0.27
CSMD1-207ENST00000520451 WDR6Q9NNW5 1121 aaKnown RBP16.75■□□□□ 0.27
CSMD1-207ENST00000520451 SH2B1Q9NRF2 756 aaPredicted RBP16.75■□□□□ 0.27
CSMD1-207ENST00000520451 USP20Q9Y2K6 914 aa16.75■□□□□ 0.27
CSMD1-207ENST00000520451 CACNA1HO95180 2353 aa16.75■□□□□ 0.27
CSMD1-207ENST00000520451 PLXNA3P51805 1871 aa16.75■□□□□ 0.27
CSMD1-207ENST00000520451 CLUHO75153 1309 aa16.74■□□□□ 0.27
CSMD1-207ENST00000520451 ACKR2O00590 384 aa16.74■□□□□ 0.27
CSMD1-207ENST00000520451 TGM5O43548 720 aa16.74■□□□□ 0.27
CSMD1-207ENST00000520451 N4BP1O75113 896 aaKnown RBP16.74■□□□□ 0.27
CSMD1-207ENST00000520451 RECQL4O94761 1208 aa16.74■□□□□ 0.27
CSMD1-207ENST00000520451 RPL17P18621 184 aaKnown RBP16.74■□□□□ 0.27
CSMD1-207ENST00000520451 MUTP22033 750 aa16.74■□□□□ 0.27
CSMD1-207ENST00000520451 GBP2P32456 591 aaPredicted RBP16.74■□□□□ 0.27
CSMD1-207ENST00000520451 TRAPPC10P48553 1259 aa16.74■□□□□ 0.27
CSMD1-207ENST00000520451 FXR2P51116 673 aaKnown RBP eCLIP16.74■□□□□ 0.27
CSMD1-207ENST00000520451 NUBP1P53384 320 aa16.74■□□□□ 0.27
CSMD1-207ENST00000520451 TDGQ13569 410 aa16.74■□□□□ 0.27
CSMD1-207ENST00000520451 PPP2R5AQ15172 486 aa16.74■□□□□ 0.27
CSMD1-207ENST00000520451 ECM1Q16610 540 aa16.74■□□□□ 0.27
CSMD1-207ENST00000520451 ASTLQ6HA08 431 aaPredicted RBP16.74■□□□□ 0.27
CSMD1-207ENST00000520451 GPR65Q8IYL9 337 aa16.74■□□□□ 0.27
CSMD1-207ENST00000520451 TMEM105Q8N8V8 129 aa16.74■□□□□ 0.27
CSMD1-207ENST00000520451 HDAC7Q8WUI4 952 aa16.74■□□□□ 0.27
CSMD1-207ENST00000520451 STAMQ92783 540 aa16.74■□□□□ 0.27
CSMD1-207ENST00000520451 ATOH1Q92858 354 aaPredicted RBP16.74■□□□□ 0.27
CSMD1-207ENST00000520451 IFT74Q96LB3 600 aa16.74■□□□□ 0.27
CSMD1-207ENST00000520451 RHOBTB2Q9BYZ6 727 aa16.74■□□□□ 0.27
CSMD1-207ENST00000520451 IRF2BPLQ9H1B7 796 aa16.74■□□□□ 0.27
CSMD1-207ENST00000520451 BHMT2Q9H2M3 363 aa16.74■□□□□ 0.27
CSMD1-207ENST00000520451 PLEKHA4Q9H4M7 779 aa16.74■□□□□ 0.27
CSMD1-207ENST00000520451 KCNK12Q9HB15 430 aa16.74■□□□□ 0.27
CSMD1-207ENST00000520451 POLD4Q9HCU8 107 aa16.74■□□□□ 0.27
CSMD1-207ENST00000520451 FNIP2Q9P278 1114 aa16.74■□□□□ 0.27
CSMD1-207ENST00000520451 USP34Q70CQ2 3546 aa16.74■□□□□ 0.27
CSMD1-207ENST00000520451 PTGESO14684 152 aa16.73■□□□□ 0.27
CSMD1-207ENST00000520451 GALR2O43603 387 aaPredicted RBP16.73■□□□□ 0.27
CSMD1-207ENST00000520451 KIF4AO95239 1232 aa16.73■□□□□ 0.27
CSMD1-207ENST00000520451 C1RP00736 705 aa16.73■□□□□ 0.27
CSMD1-207ENST00000520451 EDN1P05305 212 aa16.73■□□□□ 0.27
CSMD1-207ENST00000520451 THP07101 528 aa16.73■□□□□ 0.27
CSMD1-207ENST00000520451 RTP2Q5QGT7 225 aa16.73■□□□□ 0.27
CSMD1-207ENST00000520451 EEF1DP3Q658K8 133 aa16.73■□□□□ 0.27
CSMD1-207ENST00000520451 PRSS55Q6UWB4 352 aaPredicted RBP16.73■□□□□ 0.27
CSMD1-207ENST00000520451 C4orf32Q8N8J7 132 aa16.73■□□□□ 0.27
CSMD1-207ENST00000520451 ZNF707Q96C28 371 aaPredicted RBP16.73■□□□□ 0.27
CSMD1-207ENST00000520451 CXCL16Q9H2A7 254 aa16.73■□□□□ 0.27
CSMD1-207ENST00000520451 PIDD1Q9HB75 910 aa16.73■□□□□ 0.27
CSMD1-207ENST00000520451 ZDHHC7Q9NXF8 308 aa16.73■□□□□ 0.27
CSMD1-207ENST00000520451 LRWD1Q9UFC0 647 aa16.73■□□□□ 0.27
CSMD1-207ENST00000520451 DUSP12Q9UNI6 340 aa16.73■□□□□ 0.27
CSMD1-207ENST00000520451 KIAA1024Q9UPX6 916 aa16.73■□□□□ 0.27
CSMD1-207ENST00000520451 GDAQ9Y2T3 454 aa16.73■□□□□ 0.27
CSMD1-207ENST00000520451 H0Y858 1186 aa16.72■□□□□ 0.27
CSMD1-207ENST00000520451 EFNA5P52803 228 aa16.72■□□□□ 0.27
CSMD1-207ENST00000520451 DCAF4L1Q3SXM0 396 aa16.72■□□□□ 0.27
CSMD1-207ENST00000520451 CEP57Q86XR8 500 aa16.72■□□□□ 0.27
CSMD1-207ENST00000520451 FLCNQ8NFG4 579 aa16.72■□□□□ 0.27
CSMD1-207ENST00000520451 SNX29Q8TEQ0 813 aa16.72■□□□□ 0.27
CSMD1-207ENST00000520451 KIFAP3Q92845 792 aa16.72■□□□□ 0.27
CSMD1-207ENST00000520451 TTPALQ9BTX7 342 aa16.72■□□□□ 0.27
CSMD1-207ENST00000520451 NT5C3AQ9H0P0 336 aa16.72■□□□□ 0.27
CSMD1-207ENST00000520451 DDX19AQ9NUU7 478 aaKnown RBP16.72■□□□□ 0.27
CSMD1-207ENST00000520451 IGSF9Q9P2J2 1179 aa16.72■□□□□ 0.27
CSMD1-207ENST00000520451 FBXL21Q9UKT6 434 aa16.72■□□□□ 0.27
CSMD1-207ENST00000520451 PTGDRQ13258 359 aa16.71■□□□□ 0.27
CSMD1-207ENST00000520451 NAB2Q15742 525 aa16.71■□□□□ 0.27
CSMD1-207ENST00000520451 FAM171A1Q5VUB5 890 aa16.71■□□□□ 0.27
CSMD1-207ENST00000520451 LILRA6Q6PI73 481 aa16.71■□□□□ 0.27
CSMD1-207ENST00000520451 RSAD2Q8WXG1 361 aa16.71■□□□□ 0.27
CSMD1-207ENST00000520451 MYADMQ96S97 322 aa16.71■□□□□ 0.27
CSMD1-207ENST00000520451 KIF2CQ99661 725 aa16.71■□□□□ 0.27
CSMD1-207ENST00000520451 RAB34Q9BZG1 259 aa16.71■□□□□ 0.27
CSMD1-207ENST00000520451 PRKD2Q9BZL6 878 aa16.71■□□□□ 0.27
CSMD1-207ENST00000520451 EPS15L1Q9UBC2 864 aa16.71■□□□□ 0.27
CSMD1-207ENST00000520451 NARSO43776 548 aaKnown RBP16.7■□□□□ 0.26
CSMD1-207ENST00000520451 PAPLNO95428 1278 aa16.7■□□□□ 0.26
CSMD1-207ENST00000520451 U2AF2P26368 475 aaKnown RBP eCLIP16.7■□□□□ 0.26
CSMD1-207ENST00000520451 TOB1P50616 345 aaPredicted RBP16.7■□□□□ 0.26
CSMD1-207ENST00000520451 CLCN5P51795 746 aa16.7■□□□□ 0.26
CSMD1-207ENST00000520451 ELAVL2Q12926 359 aaKnown RBP16.7■□□□□ 0.26
CSMD1-207ENST00000520451 PDIA5Q14554 519 aa16.7■□□□□ 0.26
CSMD1-207ENST00000520451 PSMD5Q16401 504 aa16.7■□□□□ 0.26
CSMD1-207ENST00000520451 NT5DC1Q5TFE4 455 aa16.7■□□□□ 0.26
CSMD1-207ENST00000520451 ATF7IP2Q5U623 682 aa16.7■□□□□ 0.26
CSMD1-207ENST00000520451 CWF19L1Q69YN2 538 aaKnown RBP16.7■□□□□ 0.26
CSMD1-207ENST00000520451 GET4Q7L5D6 327 aaPredicted RBP16.7■□□□□ 0.26
CSMD1-207ENST00000520451 APBB1IPQ7Z5R6 666 aaPredicted RBP16.7■□□□□ 0.26
CSMD1-207ENST00000520451 IGSF22Q8N9C0 903 aa16.7■□□□□ 0.26
CSMD1-207ENST00000520451 PIK3R5Q8WYR1 880 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms