RNA–Protein interactions for RNA: ENST00000520339.5

CTNNA1-221, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 868 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-221ENST00000520339 RSPH1Q8WYR4 309 aa10.36□□□□□ -0.75
CTNNA1-221ENST00000520339 WASF1Q92558 559 aa10.36□□□□□ -0.75
CTNNA1-221ENST00000520339 TNFRSF25Q93038 417 aa10.36□□□□□ -0.75
CTNNA1-221ENST00000520339 CEP170P1Q96L14 293 aa10.36□□□□□ -0.75
CTNNA1-221ENST00000520339 NLRP4Q96MN2 994 aa10.36□□□□□ -0.75
CTNNA1-221ENST00000520339 NAP1L4Q99733 375 aaKnown RBP10.36□□□□□ -0.75
CTNNA1-221ENST00000520339 PHF7Q9BWX1 381 aaPredicted RBP10.36□□□□□ -0.75
CTNNA1-221ENST00000520339 ZFAND3Q9H8U3 227 aa10.36□□□□□ -0.75
CTNNA1-221ENST00000520339 ENTPD7Q9NQZ7 604 aa10.36□□□□□ -0.75
CTNNA1-221ENST00000520339 RGL1Q9NZL6 768 aa10.36□□□□□ -0.75
CTNNA1-221ENST00000520339 DNMT3AQ9Y6K1 912 aaPredicted RBP10.36□□□□□ -0.75
CTNNA1-221ENST00000520339 C2orf71A6NGG8 1288 aa10.35□□□□□ -0.75
CTNNA1-221ENST00000520339 MEIS3P2A8K0S8 358 aa10.35□□□□□ -0.75
CTNNA1-221ENST00000520339 GDF9O60383 454 aa10.35□□□□□ -0.75
CTNNA1-221ENST00000520339 OFD1O75665 1012 aa10.35□□□□□ -0.75
CTNNA1-221ENST00000520339 SLITRK3O94933 977 aa10.35□□□□□ -0.75
CTNNA1-221ENST00000520339 SPIRE1Q08AE8 756 aa10.35□□□□□ -0.75
CTNNA1-221ENST00000520339 MTMR3Q13615 1198 aa10.35□□□□□ -0.75
CTNNA1-221ENST00000520339 TLR1Q15399 786 aa10.35□□□□□ -0.75
CTNNA1-221ENST00000520339 TWF2Q6IBS0 349 aaKnown RBP10.35□□□□□ -0.75
CTNNA1-221ENST00000520339 ANKRD54Q6NXT1 300 aa10.35□□□□□ -0.75
CTNNA1-221ENST00000520339 CATSPER4Q7RTX7 472 aa10.35□□□□□ -0.75
CTNNA1-221ENST00000520339 TMC7Q7Z402 723 aa10.35□□□□□ -0.75
CTNNA1-221ENST00000520339 MRPL10Q7Z7H8 261 aaKnown RBP10.35□□□□□ -0.75
CTNNA1-221ENST00000520339 GLYCTKQ8IVS8 523 aa10.35□□□□□ -0.75
CTNNA1-221ENST00000520339 EXOC8Q8IYI6 725 aa10.35□□□□□ -0.75
CTNNA1-221ENST00000520339 KDF1Q8NAX2 398 aaPredicted RBP10.35□□□□□ -0.75
CTNNA1-221ENST00000520339 PRPF31Q8WWY3 499 aaKnown RBP10.35□□□□□ -0.75
CTNNA1-221ENST00000520339 SLC7A3Q8WY07 619 aa10.35□□□□□ -0.75
CTNNA1-221ENST00000520339 EDAQ92838 391 aa10.35□□□□□ -0.75
CTNNA1-221ENST00000520339 LPPQ93052 612 aa10.35□□□□□ -0.75
CTNNA1-221ENST00000520339 COL26A1Q96A83 441 aa10.35□□□□□ -0.75
CTNNA1-221ENST00000520339 TMEM143Q96AN5 459 aa10.35□□□□□ -0.75
CTNNA1-221ENST00000520339 LXNQ9BS40 222 aa10.35□□□□□ -0.75
CTNNA1-221ENST00000520339 KLF16Q9BXK1 252 aaPredicted RBP10.35□□□□□ -0.75
CTNNA1-221ENST00000520339 MRPL9Q9BYD2 267 aaKnown RBP10.35□□□□□ -0.75
CTNNA1-221ENST00000520339 ZSWIM4Q9H7M6 989 aa10.35□□□□□ -0.75
CTNNA1-221ENST00000520339 FAM105AQ9NUU6 356 aa10.35□□□□□ -0.75
CTNNA1-221ENST00000520339 PIN4Q9Y237 131 aaKnown RBP10.35□□□□□ -0.75
CTNNA1-221ENST00000520339 COL4A3BPQ9Y5P4 624 aa10.35□□□□□ -0.75
CTNNA1-221ENST00000520339 NT5C1B-RDH14C9J2C7 533 aa10.34□□□□□ -0.75
CTNNA1-221ENST00000520339 ZBTB39O15060 712 aa10.34□□□□□ -0.75
CTNNA1-221ENST00000520339 MARCH6O60337 910 aa10.34□□□□□ -0.75
CTNNA1-221ENST00000520339 CLASP2O75122 1294 aaKnown RBP10.34□□□□□ -0.75
CTNNA1-221ENST00000520339 BAG4O95429 457 aaKnown RBP10.34□□□□□ -0.75
CTNNA1-221ENST00000520339 LARGE1O95461 756 aa10.34□□□□□ -0.75
CTNNA1-221ENST00000520339 GALTP07902 379 aa10.34□□□□□ -0.75
CTNNA1-221ENST00000520339 HOXB8P17481 243 aaPredicted RBP10.34□□□□□ -0.75
CTNNA1-221ENST00000520339 HOXA11P31270 313 aaPredicted RBP10.34□□□□□ -0.75
CTNNA1-221ENST00000520339 YWHABP31946 246 aaKnown RBP10.34□□□□□ -0.75
CTNNA1-221ENST00000520339 KRT2P35908 639 aa10.34□□□□□ -0.75
CTNNA1-221ENST00000520339 TECP42680 631 aa10.34□□□□□ -0.75
CTNNA1-221ENST00000520339 PTGIRP43119 386 aa10.34□□□□□ -0.75
CTNNA1-221ENST00000520339 ALDH7A1P49419 539 aaKnown RBP10.34□□□□□ -0.75
CTNNA1-221ENST00000520339 POLGP54098 1239 aaPredicted RBP10.34□□□□□ -0.75
CTNNA1-221ENST00000520339 MARSP56192 900 aaKnown RBP10.34□□□□□ -0.75
CTNNA1-221ENST00000520339 FOXK2Q01167 660 aa10.34□□□□□ -0.75
CTNNA1-221ENST00000520339 LAMTOR4Q0VGL1 99 aa10.34□□□□□ -0.75
CTNNA1-221ENST00000520339 CTTNQ14247 550 aaKnown RBP10.34□□□□□ -0.75
CTNNA1-221ENST00000520339 SMC1AQ14683 1233 aaKnown RBP10.34□□□□□ -0.75
CTNNA1-221ENST00000520339 LONRF3Q496Y0 759 aa10.34□□□□□ -0.75
CTNNA1-221ENST00000520339 NOMO2Q5JPE7 1267 aa10.34□□□□□ -0.75
CTNNA1-221ENST00000520339 UBXN11Q5T124 520 aa10.34□□□□□ -0.75
CTNNA1-221ENST00000520339 NCAPH2Q6IBW4 605 aa10.34□□□□□ -0.75
CTNNA1-221ENST00000520339 GLB1LQ6UWU2 654 aa10.34□□□□□ -0.75
CTNNA1-221ENST00000520339 Q6ZVU0 165 aa10.34□□□□□ -0.75
CTNNA1-221ENST00000520339 OTUD6AQ7L8S5 288 aa10.34□□□□□ -0.75
CTNNA1-221ENST00000520339 SRGAP1Q7Z6B7 1085 aa10.34□□□□□ -0.75
CTNNA1-221ENST00000520339 TMEM173Q86WV6 379 aaPredicted RBP10.34□□□□□ -0.75
CTNNA1-221ENST00000520339 SLFN12Q8IYM2 578 aa10.34□□□□□ -0.75
CTNNA1-221ENST00000520339 NSUN7Q8NE18 718 aaKnown RBP10.34□□□□□ -0.75
CTNNA1-221ENST00000520339 PSPC1Q8WXF1 523 aaKnown RBP10.34□□□□□ -0.75
CTNNA1-221ENST00000520339 GTF3C6Q969F1 213 aa10.34□□□□□ -0.75
CTNNA1-221ENST00000520339 DYDC2Q96IM9 177 aa10.34□□□□□ -0.75
CTNNA1-221ENST00000520339 RPGRIP1Q96KN7 1286 aa10.34□□□□□ -0.75
CTNNA1-221ENST00000520339 HSD17B14Q9BPX1 270 aa10.34□□□□□ -0.75
CTNNA1-221ENST00000520339 NRDE2Q9H7Z3 1164 aa10.34□□□□□ -0.75
CTNNA1-221ENST00000520339 MINDY3Q9H8M7 445 aa10.34□□□□□ -0.75
CTNNA1-221ENST00000520339 AGPAT5Q9NUQ2 364 aa10.34□□□□□ -0.75
CTNNA1-221ENST00000520339 TBC1D13Q9NVG8 400 aa10.34□□□□□ -0.75
CTNNA1-221ENST00000520339 PCDHB2Q9Y5E7 798 aa10.34□□□□□ -0.75
CTNNA1-221ENST00000520339 BTBD18B2RXH4 712 aa10.33□□□□□ -0.76
CTNNA1-221ENST00000520339 MEN1O00255 615 aa10.33□□□□□ -0.76
CTNNA1-221ENST00000520339 ASAP2O43150 1006 aa10.33□□□□□ -0.76
CTNNA1-221ENST00000520339 GAS2O43903 313 aaKnown RBP10.33□□□□□ -0.76
CTNNA1-221ENST00000520339 JAK2O60674 1132 aa10.33□□□□□ -0.76
CTNNA1-221ENST00000520339 LYPLA2O95372 231 aa10.33□□□□□ -0.76
CTNNA1-221ENST00000520339 CXCL14O95715 111 aa10.33□□□□□ -0.76
CTNNA1-221ENST00000520339 SRGAP2CP0DJJ0 459 aa10.33□□□□□ -0.76
CTNNA1-221ENST00000520339 SRGAP2BP0DMP2 458 aa10.33□□□□□ -0.76
CTNNA1-221ENST00000520339 RAB27AP51159 221 aa10.33□□□□□ -0.76
CTNNA1-221ENST00000520339 RELBQ01201 579 aa10.33□□□□□ -0.76
CTNNA1-221ENST00000520339 ST3GAL1Q11201 340 aa10.33□□□□□ -0.76
CTNNA1-221ENST00000520339 CLN3Q13286 438 aa10.33□□□□□ -0.76
CTNNA1-221ENST00000520339 XKR9Q5GH70 373 aa10.33□□□□□ -0.76
CTNNA1-221ENST00000520339 LLGL2Q6P1M3 1020 aa10.33□□□□□ -0.76
CTNNA1-221ENST00000520339 AGMOQ6ZNB7 445 aa10.33□□□□□ -0.76
CTNNA1-221ENST00000520339 HFE2Q6ZVN8 426 aa10.33□□□□□ -0.76
CTNNA1-221ENST00000520339 DDX53Q86TM3 631 aaKnown RBP10.33□□□□□ -0.76
CTNNA1-221ENST00000520339 FERMT3Q86UX7 667 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms