RNA–Protein interactions for RNA: ENST00000520337.1

CTHRC1-203, Transcript of collagen triple helix repeat containing 1, humanhuman

TSL 1 (best) BASIC

Gene CTHRC1, Length 1,198 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1-203ENST00000520337 CCDC62Q6P9F0 684 aa8.72□□□□□ -1.01
CTHRC1-203ENST00000520337 MAMDC4Q6UXC1 1216 aa8.72□□□□□ -1.01
CTHRC1-203ENST00000520337 EEPD1Q7L9B9 569 aa8.72□□□□□ -1.01
CTHRC1-203ENST00000520337 SMYD4Q8IYR2 804 aaPredicted RBP8.72□□□□□ -1.01
CTHRC1-203ENST00000520337 RDM1Q8NG50 284 aa8.72□□□□□ -1.01
CTHRC1-203ENST00000520337 NEK9Q8TD19 979 aa8.72□□□□□ -1.01
CTHRC1-203ENST00000520337 USP6NLQ92738 828 aa8.72□□□□□ -1.01
CTHRC1-203ENST00000520337 LXNQ9BS40 222 aa8.72□□□□□ -1.01
CTHRC1-203ENST00000520337 LRRC27Q9C0I9 530 aa8.72□□□□□ -1.01
CTHRC1-203ENST00000520337 NAT10Q9H0A0 1025 aaKnown RBP8.72□□□□□ -1.01
CTHRC1-203ENST00000520337 ZFYVE28Q9HCC9 887 aa8.72□□□□□ -1.01
CTHRC1-203ENST00000520337 RMND1Q9NWS8 449 aa8.72□□□□□ -1.01
CTHRC1-203ENST00000520337 DDX41Q9UJV9 622 aaKnown RBP8.72□□□□□ -1.01
CTHRC1-203ENST00000520337 DNM3Q9UQ16 869 aa8.72□□□□□ -1.01
CTHRC1-203ENST00000520337 DIS3Q9Y2L1 958 aaKnown RBP8.72□□□□□ -1.01
CTHRC1-203ENST00000520337 KRTAP4-8A0A0G2JLE6 195 aa8.71□□□□□ -1.02
CTHRC1-203ENST00000520337 NPHP3-ACAD11A0A0J9YXS1 232 aa8.71□□□□□ -1.02
CTHRC1-203ENST00000520337 MEGF11A6BM72 1044 aa8.71□□□□□ -1.02
CTHRC1-203ENST00000520337 WDR64B1ANS9 1081 aa8.71□□□□□ -1.02
CTHRC1-203ENST00000520337 AP5Z1O43299 807 aa8.71□□□□□ -1.02
CTHRC1-203ENST00000520337 CA12O43570 354 aa8.71□□□□□ -1.02
CTHRC1-203ENST00000520337 AOC2O75106 756 aa8.71□□□□□ -1.02
CTHRC1-203ENST00000520337 ARIH2O95376 493 aa8.71□□□□□ -1.02
CTHRC1-203ENST00000520337 SNAI1O95863 264 aaPredicted RBP8.71□□□□□ -1.02
CTHRC1-203ENST00000520337 P4HBP07237 508 aaKnown RBP8.71□□□□□ -1.02
CTHRC1-203ENST00000520337 UBA1P22314 1058 aaKnown RBP8.71□□□□□ -1.02
CTHRC1-203ENST00000520337 CTGFP29279 349 aa8.71□□□□□ -1.02
CTHRC1-203ENST00000520337 QARSP47897 775 aaKnown RBP8.71□□□□□ -1.02
CTHRC1-203ENST00000520337 ACTR2P61160 394 aa8.71□□□□□ -1.02
CTHRC1-203ENST00000520337 ASIC1P78348 528 aa8.71□□□□□ -1.02
CTHRC1-203ENST00000520337 NOGQ13253 232 aa8.71□□□□□ -1.02
CTHRC1-203ENST00000520337 DEFB115Q30KQ5 88 aa8.71□□□□□ -1.02
CTHRC1-203ENST00000520337 CT47A1Q5JQC4 288 aaPredicted RBP8.71□□□□□ -1.02
CTHRC1-203ENST00000520337 TMEM63BQ5T3F8 832 aa8.71□□□□□ -1.02
CTHRC1-203ENST00000520337 RINT1Q6NUQ1 792 aa8.71□□□□□ -1.02
CTHRC1-203ENST00000520337 TAPT1Q6NXT6 567 aa8.71□□□□□ -1.02
CTHRC1-203ENST00000520337 ABHD15Q6UXT9 468 aa8.71□□□□□ -1.02
CTHRC1-203ENST00000520337 C1orf186Q6ZWK4 172 aa8.71□□□□□ -1.02
CTHRC1-203ENST00000520337 UNC13DQ70J99 1090 aa8.71□□□□□ -1.02
CTHRC1-203ENST00000520337 ARMCX2Q7L311 632 aa8.71□□□□□ -1.02
CTHRC1-203ENST00000520337 DYMQ7RTS9 669 aa8.71□□□□□ -1.02
CTHRC1-203ENST00000520337 VN1R5Q7Z5H4 357 aa8.71□□□□□ -1.02
CTHRC1-203ENST00000520337 GPBP1Q86WP2 473 aa8.71□□□□□ -1.02
CTHRC1-203ENST00000520337 GIMAP8Q8ND71 665 aaPredicted RBP8.71□□□□□ -1.02
CTHRC1-203ENST00000520337 NPLOC4Q8TAT6 608 aa8.71□□□□□ -1.02
CTHRC1-203ENST00000520337 PIGOQ8TEQ8 1089 aa8.71□□□□□ -1.02
CTHRC1-203ENST00000520337 SLC7A3Q8WY07 619 aa8.71□□□□□ -1.02
CTHRC1-203ENST00000520337 MAML3Q96JK9 1138 aa8.71□□□□□ -1.02
CTHRC1-203ENST00000520337 CAPNS2Q96L46 248 aa8.71□□□□□ -1.02
CTHRC1-203ENST00000520337 NAP1L5Q96NT1 182 aaPredicted RBP8.71□□□□□ -1.02
CTHRC1-203ENST00000520337 MPHOSPH6Q99547 160 aaKnown RBP8.71□□□□□ -1.02
CTHRC1-203ENST00000520337 RUSC1Q9BVN2 902 aa8.71□□□□□ -1.02
CTHRC1-203ENST00000520337 KATNBL1Q9H079 304 aa8.71□□□□□ -1.02
CTHRC1-203ENST00000520337 HSD3B7Q9H2F3 369 aa8.71□□□□□ -1.02
CTHRC1-203ENST00000520337 BHMT2Q9H2M3 363 aa8.71□□□□□ -1.02
CTHRC1-203ENST00000520337 ZSWIM4Q9H7M6 989 aa8.71□□□□□ -1.02
CTHRC1-203ENST00000520337 PDGFCQ9NRA1 345 aa8.71□□□□□ -1.02
CTHRC1-203ENST00000520337 SLC9A2Q9UBY0 812 aa8.71□□□□□ -1.02
CTHRC1-203ENST00000520337 GJD2Q9UKL4 321 aa8.71□□□□□ -1.02
CTHRC1-203ENST00000520337 HIF3AQ9Y2N7 669 aa8.71□□□□□ -1.02
CTHRC1-203ENST00000520337 GDAQ9Y2T3 454 aa8.71□□□□□ -1.02
CTHRC1-203ENST00000520337 PCDHA10Q9Y5I2 948 aa8.71□□□□□ -1.02
CTHRC1-203ENST00000520337 IVNS1ABPQ9Y6Y0 642 aa8.71□□□□□ -1.02
CTHRC1-203ENST00000520337 SYNGAP1Q96PV0 1343 aa8.71□□□□□ -1.02
CTHRC1-203ENST00000520337 CASP8AP2Q9UKL3 1982 aa8.7□□□□□ -1.02
CTHRC1-203ENST00000520337 IGKV6D-21A0A0A0MT36 114 aa8.7□□□□□ -1.02
CTHRC1-203ENST00000520337 GSTTP1A0A1W2PQM5 241 aa8.7□□□□□ -1.02
CTHRC1-203ENST00000520337 RBM47A0AV96 593 aaKnown RBP8.7□□□□□ -1.02
CTHRC1-203ENST00000520337 FRMD3A2A2Y4 597 aa8.7□□□□□ -1.02
CTHRC1-203ENST00000520337 IKBKBO14920 756 aa8.7□□□□□ -1.02
CTHRC1-203ENST00000520337 SART1O43290 800 aaKnown RBP8.7□□□□□ -1.02
CTHRC1-203ENST00000520337 SORBS3O60504 671 aa8.7□□□□□ -1.02
CTHRC1-203ENST00000520337 FARP2O94887 1054 aaPredicted RBP8.7□□□□□ -1.02
CTHRC1-203ENST00000520337 IGHA2P01877 340 aa8.7□□□□□ -1.02
CTHRC1-203ENST00000520337 SSBP05455 408 aaKnown RBP eCLIP8.7□□□□□ -1.02
CTHRC1-203ENST00000520337 SUPT20HL2P0C7V6 817 aa8.7□□□□□ -1.02
CTHRC1-203ENST00000520337 ERCC5P28715 1186 aaPredicted RBP8.7□□□□□ -1.02
CTHRC1-203ENST00000520337 PRCPP42785 496 aa8.7□□□□□ -1.02
CTHRC1-203ENST00000520337 PSMC5P62195 406 aa8.7□□□□□ -1.02
CTHRC1-203ENST00000520337 STK4Q13043 487 aa8.7□□□□□ -1.02
CTHRC1-203ENST00000520337 GRM1Q13255 1194 aa8.7□□□□□ -1.02
CTHRC1-203ENST00000520337 GIT2Q14161 759 aa8.7□□□□□ -1.02
CTHRC1-203ENST00000520337 LY6KQ17RY6 165 aa8.7□□□□□ -1.02
CTHRC1-203ENST00000520337 PEAR1Q5VY43 1037 aaPredicted RBP8.7□□□□□ -1.02
CTHRC1-203ENST00000520337 KCNV1Q6PIU1 500 aa8.7□□□□□ -1.02
CTHRC1-203ENST00000520337 CYFIP1Q7L576 1253 aa8.7□□□□□ -1.02
CTHRC1-203ENST00000520337 DPP9Q86TI2 863 aa8.7□□□□□ -1.02
CTHRC1-203ENST00000520337 FBXO16Q8IX29 292 aaPredicted RBP8.7□□□□□ -1.02
CTHRC1-203ENST00000520337 C4orf19Q8IY42 314 aa8.7□□□□□ -1.02
CTHRC1-203ENST00000520337 SMAP1Q8IYB5 467 aaPredicted RBP8.7□□□□□ -1.02
CTHRC1-203ENST00000520337 AOPEPQ8N6M6 819 aa8.7□□□□□ -1.02
CTHRC1-203ENST00000520337 KIAA0895Q8NCT3 520 aa8.7□□□□□ -1.02
CTHRC1-203ENST00000520337 HPS3Q969F9 1004 aa8.7□□□□□ -1.02
CTHRC1-203ENST00000520337 DBR1Q9UK59 544 aaKnown RBP8.7□□□□□ -1.02
CTHRC1-203ENST00000520337 SAMM50Q9Y512 469 aa8.7□□□□□ -1.02
CTHRC1-203ENST00000520337 PCDHA2Q9Y5H9 948 aa8.7□□□□□ -1.02
CTHRC1-203ENST00000520337 ZNF862O60290 1169 aa8.69□□□□□ -1.02
CTHRC1-203ENST00000520337 GGPS1O95749 300 aa8.69□□□□□ -1.02
CTHRC1-203ENST00000520337 HOXC6P09630 235 aa8.69□□□□□ -1.02
CTHRC1-203ENST00000520337 KCNA1Q09470 495 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms