RNA–Protein interactions for RNA: ENST00000520233.1

SDC2-205, Transcript of syndecan 2, humanhuman

TSL 4

Gene SDC2, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-205ENST00000520233 AOPEPQ8N6M6 819 aa19.39■□□□□ 0.69
SDC2-205ENST00000520233 ZSWIM2Q8NEG5 633 aa19.39■□□□□ 0.69
SDC2-205ENST00000520233 PGBD4Q96DM1 585 aa19.39■□□□□ 0.69
SDC2-205ENST00000520233 FAM213AQ9BRX8 229 aa19.39■□□□□ 0.69
SDC2-205ENST00000520233 CCDC94Q9BW85 323 aaPredicted RBP19.39■□□□□ 0.69
SDC2-205ENST00000520233 NXF3Q9H4D5 531 aaKnown RBP19.39■□□□□ 0.69
SDC2-205ENST00000520233 ELAC1Q9H777 363 aaKnown RBP19.39■□□□□ 0.69
SDC2-205ENST00000520233 RNF216Q9NWF9 866 aaPredicted RBP19.39■□□□□ 0.69
SDC2-205ENST00000520233 FRMD4BQ9Y2L6 1034 aa19.39■□□□□ 0.69
SDC2-205ENST00000520233 NFE2L3Q9Y4A8 694 aa19.39■□□□□ 0.69
SDC2-205ENST00000520233 ZNF233A6NK53 670 aa19.38■□□□□ 0.69
SDC2-205ENST00000520233 SLC16A3O15427 465 aaKnown RBP19.38■□□□□ 0.69
SDC2-205ENST00000520233 AKAP3O75969 853 aa19.38■□□□□ 0.69
SDC2-205ENST00000520233 EOMESO95936 686 aa19.38■□□□□ 0.69
SDC2-205ENST00000520233 ITGA4P13612 1032 aa19.38■□□□□ 0.69
SDC2-205ENST00000520233 PSMC2P35998 433 aaKnown RBP19.38■□□□□ 0.69
SDC2-205ENST00000520233 TNFSF9P41273 254 aa19.38■□□□□ 0.69
SDC2-205ENST00000520233 CASP4P49662 377 aa19.38■□□□□ 0.69
SDC2-205ENST00000520233 OSTNP61366 133 aa19.38■□□□□ 0.69
SDC2-205ENST00000520233 NCAPHQ15003 741 aa19.38■□□□□ 0.69
SDC2-205ENST00000520233 SNRNP35Q16560 246 aaKnown RBP19.38■□□□□ 0.69
SDC2-205ENST00000520233 SEZ6Q53EL9 994 aa19.38■□□□□ 0.69
SDC2-205ENST00000520233 TMEM240Q5SV17 173 aa19.38■□□□□ 0.69
SDC2-205ENST00000520233 ZNF598Q86UK7 904 aaKnown RBP19.38■□□□□ 0.69
SDC2-205ENST00000520233 EEF2KMTQ96G04 330 aa19.38■□□□□ 0.69
SDC2-205ENST00000520233 ACAP3Q96P50 834 aa19.38■□□□□ 0.69
SDC2-205ENST00000520233 THAP9Q9H5L6 903 aa19.38■□□□□ 0.69
SDC2-205ENST00000520233 SNTG2Q9NY99 539 aa19.38■□□□□ 0.69
SDC2-205ENST00000520233 HES2Q9Y543 173 aa19.38■□□□□ 0.69
SDC2-205ENST00000520233 TET1Q8NFU7 2136 aa19.37■□□□□ 0.69
SDC2-205ENST00000520233 BECN2A8MW95 431 aa19.37■□□□□ 0.69
SDC2-205ENST00000520233 GNA14O95837 355 aa19.37■□□□□ 0.69
SDC2-205ENST00000520233 EPB41P11171 864 aaKnown RBP19.37■□□□□ 0.69
SDC2-205ENST00000520233 ATF7P17544 494 aaPredicted RBP19.37■□□□□ 0.69
SDC2-205ENST00000520233 MAGEA10P43363 369 aaPredicted RBP19.37■□□□□ 0.69
SDC2-205ENST00000520233 YARSP54577 528 aaKnown RBP19.37■□□□□ 0.69
SDC2-205ENST00000520233 CBWD2Q8IUF1 395 aa19.37■□□□□ 0.69
SDC2-205ENST00000520233 BRSK2Q8IWQ3 736 aa19.37■□□□□ 0.69
SDC2-205ENST00000520233 TMEM192Q8IY95 271 aa19.37■□□□□ 0.69
SDC2-205ENST00000520233 RDH13Q8NBN7 331 aa19.37■□□□□ 0.69
SDC2-205ENST00000520233 BUD13Q9BRD0 619 aaKnown RBP eCLIP19.37■□□□□ 0.693e-15■□□□□ 8.8
SDC2-205ENST00000520233 RNF39Q9H2S5 420 aa19.37■□□□□ 0.69
SDC2-205ENST00000520233 RPF1Q9H9Y2 349 aaKnown RBP19.37■□□□□ 0.69
SDC2-205ENST00000520233 TMEM161AQ9NX61 479 aa19.37■□□□□ 0.69
SDC2-205ENST00000520233 AMHP03971 560 aa19.36■□□□□ 0.69
SDC2-205ENST00000520233 ADRB2P07550 413 aa19.36■□□□□ 0.69
SDC2-205ENST00000520233 AKAP5P24588 427 aa19.36■□□□□ 0.69
SDC2-205ENST00000520233 WDR5P61964 334 aaKnown RBP19.36■□□□□ 0.69
SDC2-205ENST00000520233 LIN28BQ6ZN17 250 aaKnown RBP eCLIP19.36■□□□□ 0.693e-6■■□□□ 13
SDC2-205ENST00000520233 OTOP2Q7RTS6 562 aa19.36■□□□□ 0.69
SDC2-205ENST00000520233 NPAS4Q8IUM7 802 aa19.36■□□□□ 0.69
SDC2-205ENST00000520233 FAM186BQ8IYM0 893 aa19.36■□□□□ 0.69
SDC2-205ENST00000520233 CRIPAKQ8N1N5 446 aa19.36■□□□□ 0.69
SDC2-205ENST00000520233 HERVK_113Q902F9 699 aa19.36■□□□□ 0.69
SDC2-205ENST00000520233 MFSD14AQ96MC6 490 aa19.36■□□□□ 0.69
SDC2-205ENST00000520233 APOL6Q9BWW8 343 aa19.36■□□□□ 0.69
SDC2-205ENST00000520233 UBN1Q9NPG3 1134 aa19.36■□□□□ 0.69
SDC2-205ENST00000520233 TOPORSQ9NS56 1045 aaPredicted RBP19.36■□□□□ 0.69
SDC2-205ENST00000520233 SAMSN1Q9NSI8 373 aaKnown RBP19.36■□□□□ 0.69
SDC2-205ENST00000520233 FANCLQ9NW38 375 aa19.36■□□□□ 0.69
SDC2-205ENST00000520233 RBAKQ9NYW8 714 aaPredicted RBP19.36■□□□□ 0.69
SDC2-205ENST00000520233 PARP2Q9UGN5 583 aa19.36■□□□□ 0.69
SDC2-205ENST00000520233 GIT1Q9Y2X7 761 aa19.36■□□□□ 0.69
SDC2-205ENST00000520233 PCDHB7Q9Y5E2 793 aa19.36■□□□□ 0.69
SDC2-205ENST00000520233 RECQL4O94761 1208 aa19.35■□□□□ 0.69
SDC2-205ENST00000520233 KCNJ6P48051 423 aa19.35■□□□□ 0.69
SDC2-205ENST00000520233 MARSP56192 900 aaKnown RBP19.35■□□□□ 0.69
SDC2-205ENST00000520233 MCCD1P59942 119 aaPredicted RBP19.35■□□□□ 0.69
SDC2-205ENST00000520233 CYP24A1Q07973 514 aa19.35■□□□□ 0.69
SDC2-205ENST00000520233 ENOX2Q16206 610 aaKnown RBP19.35■□□□□ 0.69
SDC2-205ENST00000520233 SLC10A6Q3KNW5 377 aa19.35■□□□□ 0.69
SDC2-205ENST00000520233 CDKAL1Q5VV42 579 aa19.35■□□□□ 0.69
SDC2-205ENST00000520233 AGMOQ6ZNB7 445 aa19.35■□□□□ 0.69
SDC2-205ENST00000520233 LUZP1Q86V48 1076 aa19.35■□□□□ 0.69
SDC2-205ENST00000520233 GAS2L3Q86XJ1 694 aa19.35■□□□□ 0.69
SDC2-205ENST00000520233 IRF2BP1Q8IU81 584 aa19.35■□□□□ 0.69
SDC2-205ENST00000520233 FAM114A1Q8IWE2 563 aa19.35■□□□□ 0.69
SDC2-205ENST00000520233 CD302Q8IX05 232 aa19.35■□□□□ 0.69
SDC2-205ENST00000520233 RNF169Q8NCN4 708 aa19.35■□□□□ 0.69
SDC2-205ENST00000520233 LPPQ93052 612 aa19.35■□□□□ 0.69
SDC2-205ENST00000520233 BORCS6Q96GS4 357 aa19.35■□□□□ 0.69
SDC2-205ENST00000520233 PLEKHA5Q9HAU0 1116 aa19.35■□□□□ 0.69
SDC2-205ENST00000520233 METTL14Q9HCE5 456 aaKnown RBP19.35■□□□□ 0.69
SDC2-205ENST00000520233 LRFN2Q9ULH4 789 aa19.35■□□□□ 0.69
SDC2-205ENST00000520233 TTC26A0AVF1 554 aa19.34■□□□□ 0.69
SDC2-205ENST00000520233 MEFVO15553 781 aaPredicted RBP19.34■□□□□ 0.69
SDC2-205ENST00000520233 IL18RAPO95256 599 aa19.34■□□□□ 0.69
SDC2-205ENST00000520233 CXCL8P10145 99 aa19.34■□□□□ 0.69
SDC2-205ENST00000520233 ENPEPQ07075 957 aa19.34■□□□□ 0.69
SDC2-205ENST00000520233 PSMD6Q15008 389 aa19.34■□□□□ 0.69
SDC2-205ENST00000520233 SURF1Q15526 300 aa19.34■□□□□ 0.69
SDC2-205ENST00000520233 CCDC40Q4G0X9 1142 aa19.34■□□□□ 0.69
SDC2-205ENST00000520233 ALKAL1Q6UXT8 129 aa19.34■□□□□ 0.69
SDC2-205ENST00000520233 INTS8Q75QN2 995 aaKnown RBP19.34■□□□□ 0.69
SDC2-205ENST00000520233 FRMD5Q7Z6J6 570 aa19.34■□□□□ 0.69
SDC2-205ENST00000520233 SNX27Q96L92 541 aa19.34■□□□□ 0.69
SDC2-205ENST00000520233 ASB7Q9H672 318 aa19.34■□□□□ 0.69
SDC2-205ENST00000520233 RSAD1Q9HA92 442 aa19.34■□□□□ 0.69
SDC2-205ENST00000520233 MEIS3P2A8K0S8 358 aa19.33■□□□□ 0.68
SDC2-205ENST00000520233 ZBBXA8MT70 800 aa19.33■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms