RNA–Protein interactions for RNA: ENST00000519553.1

PTPN12-213, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 3

Gene PTPN12, Length 395 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-213ENST00000519553 CT47B1P0C2W7 299 aaPredicted RBP8.03□□□□□ -1.12
PTPN12-213ENST00000519553 SP140Q13342 867 aa8.03□□□□□ -1.12
PTPN12-213ENST00000519553 MTM1Q13496 603 aa8.03□□□□□ -1.12
PTPN12-213ENST00000519553 R3HDM1Q15032 1099 aaKnown RBP8.03□□□□□ -1.12
PTPN12-213ENST00000519553 PDZD4Q76G19 769 aaPredicted RBP8.03□□□□□ -1.12
PTPN12-213ENST00000519553 DOK3Q7L591 496 aa8.03□□□□□ -1.12
PTPN12-213ENST00000519553 APBB1IPQ7Z5R6 666 aaPredicted RBP8.03□□□□□ -1.12
PTPN12-213ENST00000519553 ELOA2Q8IYF1 753 aaPredicted RBP8.03□□□□□ -1.12
PTPN12-213ENST00000519553 CCHCR1Q8TD31 782 aa8.03□□□□□ -1.12
PTPN12-213ENST00000519553 C8orf49Q96NF6 230 aa8.03□□□□□ -1.12
PTPN12-213ENST00000519553 SENP6Q9GZR1 1112 aaPredicted RBP8.03□□□□□ -1.12
PTPN12-213ENST00000519553 SLC12A5Q9H2X9 1139 aa8.03□□□□□ -1.12
PTPN12-213ENST00000519553 MANSC1Q9H8J5 431 aa8.03□□□□□ -1.12
PTPN12-213ENST00000519553 PCDHB1Q9Y5F3 818 aa8.03□□□□□ -1.12
PTPN12-213ENST00000519553 PRPF3O43395 683 aaKnown RBP8.02□□□□□ -1.13
PTPN12-213ENST00000519553 TSPAN6O43657 245 aa8.02□□□□□ -1.13
PTPN12-213ENST00000519553 SGTAO43765 313 aa8.02□□□□□ -1.13
PTPN12-213ENST00000519553 GPR32O75388 356 aa8.02□□□□□ -1.13
PTPN12-213ENST00000519553 VCAM1P19320 739 aa8.02□□□□□ -1.13
PTPN12-213ENST00000519553 PDCP20941 246 aa8.02□□□□□ -1.13
PTPN12-213ENST00000519553 AKAP5P24588 427 aa8.02□□□□□ -1.13
PTPN12-213ENST00000519553 SELENOPP49908 381 aa8.02□□□□□ -1.13
PTPN12-213ENST00000519553 CDC42EP1Q00587 391 aa8.02□□□□□ -1.13
PTPN12-213ENST00000519553 CSRP2Q16527 193 aa8.02□□□□□ -1.13
PTPN12-213ENST00000519553 FAM47AQ5JRC9 791 aa8.02□□□□□ -1.13
PTPN12-213ENST00000519553 C1QL3Q5VWW1 255 aa8.02□□□□□ -1.13
PTPN12-213ENST00000519553 ANKS6Q68DC2 871 aa8.02□□□□□ -1.13
PTPN12-213ENST00000519553 ZNF585AQ6P3V2 769 aa8.02□□□□□ -1.13
PTPN12-213ENST00000519553 USP45Q70EL2 814 aa8.02□□□□□ -1.13
PTPN12-213ENST00000519553 XYLT1Q86Y38 959 aa8.02□□□□□ -1.13
PTPN12-213ENST00000519553 MDGA1Q8NFP4 955 aa8.02□□□□□ -1.13
PTPN12-213ENST00000519553 CASKIN2Q8WXE0 1202 aa8.02□□□□□ -1.13
PTPN12-213ENST00000519553 EDAQ92838 391 aa8.02□□□□□ -1.13
PTPN12-213ENST00000519553 CYFIP2Q96F07 1278 aa8.02□□□□□ -1.13
PTPN12-213ENST00000519553 CPEB1Q9BZB8 566 aaKnown RBP8.02□□□□□ -1.13
PTPN12-213ENST00000519553 ALDH1A3P47895 512 aa8.01□□□□□ -1.13
PTPN12-213ENST00000519553 DSC2Q02487 901 aa8.01□□□□□ -1.13
PTPN12-213ENST00000519553 FAM102BQ5T8I3 360 aa8.01□□□□□ -1.13
PTPN12-213ENST00000519553 AFMIDQ63HM1 303 aa8.01□□□□□ -1.13
PTPN12-213ENST00000519553 GPRIN1Q7Z2K8 1008 aa8.01□□□□□ -1.13
PTPN12-213ENST00000519553 CHPFQ8IZ52 775 aa8.01□□□□□ -1.13
PTPN12-213ENST00000519553 SLC35B2Q8TB61 432 aa8.01□□□□□ -1.13
PTPN12-213ENST00000519553 STON2Q8WXE9 905 aa8.01□□□□□ -1.13
PTPN12-213ENST00000519553 ST8SIA2Q92186 375 aa8.01□□□□□ -1.13
PTPN12-213ENST00000519553 MIEF2Q96C03 454 aa8.01□□□□□ -1.13
PTPN12-213ENST00000519553 AIFM3Q96NN9 605 aa8.01□□□□□ -1.13
PTPN12-213ENST00000519553 DMRTA2Q96SC8 542 aa8.01□□□□□ -1.13
PTPN12-213ENST00000519553 EPC1Q9H2F5 836 aa8.01□□□□□ -1.13
PTPN12-213ENST00000519553 NIPSNAP3AQ9UFN0 247 aaPredicted RBP8.01□□□□□ -1.13
PTPN12-213ENST00000519553 TCEAL9Q9UHQ7 104 aa8.01□□□□□ -1.13
PTPN12-213ENST00000519553 MYBBP1AQ9BQG0 1328 aaKnown RBP8.01□□□□□ -1.13
PTPN12-213ENST00000519553 CAPN14A8MX76 684 aa8□□□□□ -1.13
PTPN12-213ENST00000519553 CXorf49A8MYA2 514 aaPredicted RBP8□□□□□ -1.13
PTPN12-213ENST00000519553 B5MCH6 92 aa8□□□□□ -1.13
PTPN12-213ENST00000519553 PARNO95453 639 aaKnown RBP8□□□□□ -1.13
PTPN12-213ENST00000519553 HSP90B1P14625 803 aaKnown RBP8□□□□□ -1.13
PTPN12-213ENST00000519553 IL2RBP14784 551 aa8□□□□□ -1.13
PTPN12-213ENST00000519553 GNAT2P19087 354 aa8□□□□□ -1.13
PTPN12-213ENST00000519553 CYP2C19P33261 490 aa8□□□□□ -1.13
PTPN12-213ENST00000519553 MAGEA10P43363 369 aaPredicted RBP8□□□□□ -1.13
PTPN12-213ENST00000519553 RABGGTBP53611 331 aa8□□□□□ -1.13
PTPN12-213ENST00000519553 NXNQ6DKJ4 435 aa8□□□□□ -1.13
PTPN12-213ENST00000519553 EPM2AIP1Q7L775 607 aaPredicted RBP8□□□□□ -1.13
PTPN12-213ENST00000519553 MB21D1Q8N884 522 aa8□□□□□ -1.13
PTPN12-213ENST00000519553 CHST13Q8NET6 341 aa8□□□□□ -1.13
PTPN12-213ENST00000519553 OR52N2Q8NGI0 321 aa8□□□□□ -1.13
PTPN12-213ENST00000519553 IFI44Q8TCB0 444 aa8□□□□□ -1.13
PTPN12-213ENST00000519553 NSUN6Q8TEA1 469 aaKnown RBP8□□□□□ -1.13
PTPN12-213ENST00000519553 TSR2Q969E8 191 aaKnown RBP8□□□□□ -1.13
PTPN12-213ENST00000519553 FAM89AQ96GI7 184 aa8□□□□□ -1.13
PTPN12-213ENST00000519553 MRGPRX4Q96LA9 322 aa8□□□□□ -1.13
PTPN12-213ENST00000519553 ADOQ96SZ5 270 aa8□□□□□ -1.13
PTPN12-213ENST00000519553 KLC2Q9H0B6 622 aa8□□□□□ -1.13
PTPN12-213ENST00000519553 ANLNQ9NQW6 1124 aa8□□□□□ -1.13
PTPN12-213ENST00000519553 TDP1Q9NUW8 608 aa8□□□□□ -1.13
PTPN12-213ENST00000519553 TMEM140Q9NV12 185 aa8□□□□□ -1.13
PTPN12-213ENST00000519553 TCAF1Q9Y4C2 921 aa8□□□□□ -1.13
PTPN12-213ENST00000519553 ACTL7AQ9Y615 435 aa8□□□□□ -1.13
PTPN12-213ENST00000519553 CFAP20Q9Y6A4 193 aaKnown RBP8□□□□□ -1.13
PTPN12-213ENST00000519553 IPO13O94829 963 aaKnown RBP7.99□□□□□ -1.13
PTPN12-213ENST00000519553 DDCP20711 480 aa7.99□□□□□ -1.13
PTPN12-213ENST00000519553 LPOP22079 712 aaPredicted RBP7.99□□□□□ -1.13
PTPN12-213ENST00000519553 HHEXQ03014 270 aa7.99□□□□□ -1.13
PTPN12-213ENST00000519553 ZNF267Q14586 743 aaPredicted RBP7.99□□□□□ -1.13
PTPN12-213ENST00000519553 CDSNQ15517 529 aa7.99□□□□□ -1.13
PTPN12-213ENST00000519553 HS1BP3Q53T59 392 aa7.99□□□□□ -1.13
PTPN12-213ENST00000519553 ATAT1Q5SQI0 421 aa7.99□□□□□ -1.13
PTPN12-213ENST00000519553 B3GNT9Q6UX72 402 aa7.99□□□□□ -1.13
PTPN12-213ENST00000519553 HTR3DQ70Z44 454 aa7.99□□□□□ -1.13
PTPN12-213ENST00000519553 FAM83AQ86UY5 434 aa7.99□□□□□ -1.13
PTPN12-213ENST00000519553 SGMS1Q86VZ5 419 aa7.99□□□□□ -1.13
PTPN12-213ENST00000519553 TCEAL8Q8IYN2 117 aa7.99□□□□□ -1.13
PTPN12-213ENST00000519553 ANKRD35Q8N283 1001 aa7.99□□□□□ -1.13
PTPN12-213ENST00000519553 HPS3Q969F9 1004 aa7.99□□□□□ -1.13
PTPN12-213ENST00000519553 CPPED1Q9BRF8 314 aaPredicted RBP7.99□□□□□ -1.13
PTPN12-213ENST00000519553 C1QTNF3Q9BXJ4 246 aa7.99□□□□□ -1.13
PTPN12-213ENST00000519553 DEF6Q9H4E7 631 aa7.99□□□□□ -1.13
PTPN12-213ENST00000519553 SLC23A1Q9UHI7 598 aa7.99□□□□□ -1.13
PTPN12-213ENST00000519553 NOB1Q9ULX3 412 aaKnown RBP7.99□□□□□ -1.13
PTPN12-213ENST00000519553 PJA2O43164 708 aa7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms