RNA–Protein interactions for RNA: ENST00000519115.5

SDCBP-206, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 812 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-206ENST00000519115 NPTXRO95502 500 aa8.31□□□□□ -1.08
SDCBP-206ENST00000519115 KRT18P05783 430 aaKnown RBP8.31□□□□□ -1.08
SDCBP-206ENST00000519115 TPM3P06753 285 aa8.31□□□□□ -1.08
SDCBP-206ENST00000519115 CDC25BP30305 580 aa8.31□□□□□ -1.08
SDCBP-206ENST00000519115 NPTX2P47972 431 aa8.31□□□□□ -1.08
SDCBP-206ENST00000519115 RAB27AP51159 221 aa8.31□□□□□ -1.08
SDCBP-206ENST00000519115 ASIC1P78348 528 aa8.31□□□□□ -1.08
SDCBP-206ENST00000519115 GIT2Q14161 759 aa8.31□□□□□ -1.08
SDCBP-206ENST00000519115 MYBPC2Q14324 1141 aa8.31□□□□□ -1.08
SDCBP-206ENST00000519115 NCAPHQ15003 741 aa8.31□□□□□ -1.08
SDCBP-206ENST00000519115 NFIL3Q16649 462 aa8.31□□□□□ -1.08
SDCBP-206ENST00000519115 MAPK6Q16659 721 aa8.31□□□□□ -1.08
SDCBP-206ENST00000519115 BMT2Q1RMZ1 405 aa8.31□□□□□ -1.08
SDCBP-206ENST00000519115 KMT5BQ4FZB7 885 aa8.31□□□□□ -1.08
SDCBP-206ENST00000519115 ARSHQ5FYA8 562 aa8.31□□□□□ -1.08
SDCBP-206ENST00000519115 UBXN11Q5T124 520 aa8.31□□□□□ -1.08
SDCBP-206ENST00000519115 SPOUT1Q5T280 376 aaKnown RBP8.31□□□□□ -1.08
SDCBP-206ENST00000519115 SMYD5Q6GMV2 418 aa8.31□□□□□ -1.08
SDCBP-206ENST00000519115 NOTUMQ6P988 496 aa8.31□□□□□ -1.08
SDCBP-206ENST00000519115 DHX40Q8IX18 779 aaKnown RBP8.31□□□□□ -1.08
SDCBP-206ENST00000519115 ABI1Q8IZP0 508 aa8.31□□□□□ -1.08
SDCBP-206ENST00000519115 MAFAQ8NHW3 353 aaPredicted RBP8.31□□□□□ -1.08
SDCBP-206ENST00000519115 PPM1EQ8WY54 764 aa8.31□□□□□ -1.08
SDCBP-206ENST00000519115 MRFAP1L1Q96HT8 127 aa8.31□□□□□ -1.08
SDCBP-206ENST00000519115 TMEM117Q9H0C3 514 aa8.31□□□□□ -1.08
SDCBP-206ENST00000519115 CCDC113Q9H0I3 377 aa8.31□□□□□ -1.08
SDCBP-206ENST00000519115 NXF3Q9H4D5 531 aaKnown RBP8.31□□□□□ -1.08
SDCBP-206ENST00000519115 ZHX3Q9H4I2 956 aa8.31□□□□□ -1.08
SDCBP-206ENST00000519115 ELAC1Q9H777 363 aaKnown RBP8.31□□□□□ -1.08
SDCBP-206ENST00000519115 KMT5AQ9NQR1 393 aa8.31□□□□□ -1.08
SDCBP-206ENST00000519115 IGSF5Q9NSI5 407 aa8.31□□□□□ -1.08
SDCBP-206ENST00000519115 PRMT7Q9NVM4 692 aaPredicted RBP8.31□□□□□ -1.08
SDCBP-206ENST00000519115 LARSQ9P2J5 1176 aaKnown RBP8.31□□□□□ -1.08
SDCBP-206ENST00000519115 HES2Q9Y543 173 aa8.31□□□□□ -1.08
SDCBP-206ENST00000519115 PDCD11Q14690 1871 aaKnown RBP8.31□□□□□ -1.08
SDCBP-206ENST00000519115 UBE4BO95155 1302 aa8.3□□□□□ -1.08
SDCBP-206ENST00000519115 CUL9Q8IWT3 2517 aa8.3□□□□□ -1.08
SDCBP-206ENST00000519115 HOXA2O43364 376 aa8.3□□□□□ -1.08
SDCBP-206ENST00000519115 CBFA2T2O43439 604 aa8.3□□□□□ -1.08
SDCBP-206ENST00000519115 TBCAO75347 108 aaKnown RBP8.3□□□□□ -1.08
SDCBP-206ENST00000519115 FAM13AO94988 1023 aa8.3□□□□□ -1.08
SDCBP-206ENST00000519115 GNA14O95837 355 aa8.3□□□□□ -1.08
SDCBP-206ENST00000519115 EOMESO95936 686 aa8.3□□□□□ -1.08
SDCBP-206ENST00000519115 PLS3P13797 630 aa8.3□□□□□ -1.08
SDCBP-206ENST00000519115 ZNF18P17022 549 aa8.3□□□□□ -1.08
SDCBP-206ENST00000519115 CCNE1P24864 410 aa8.3□□□□□ -1.08
SDCBP-206ENST00000519115 AXLP30530 894 aa8.3□□□□□ -1.08
SDCBP-206ENST00000519115 BMPR1AP36894 532 aa8.3□□□□□ -1.08
SDCBP-206ENST00000519115 PBX3P40426 434 aa8.3□□□□□ -1.08
SDCBP-206ENST00000519115 EFNA5P52803 228 aa8.3□□□□□ -1.08
SDCBP-206ENST00000519115 MCCD1P59942 119 aaPredicted RBP8.3□□□□□ -1.08
SDCBP-206ENST00000519115 PRPF4BQ13523 1007 aaKnown RBP8.3□□□□□ -1.08
SDCBP-206ENST00000519115 PCBP1Q15365 356 aaKnown RBP eCLIP8.3□□□□□ -1.08
SDCBP-206ENST00000519115 CCDC85BQ15834 202 aaPredicted RBP8.3□□□□□ -1.08
SDCBP-206ENST00000519115 FAM187BQ17R55 369 aa8.3□□□□□ -1.08
SDCBP-206ENST00000519115 EEF1DP3Q658K8 133 aa8.3□□□□□ -1.08
SDCBP-206ENST00000519115 GLB1LQ6UWU2 654 aa8.3□□□□□ -1.08
SDCBP-206ENST00000519115 AGMOQ6ZNB7 445 aa8.3□□□□□ -1.08
SDCBP-206ENST00000519115 FAM43BQ6ZT52 329 aaPredicted RBP8.3□□□□□ -1.08
SDCBP-206ENST00000519115 DYMQ7RTS9 669 aa8.3□□□□□ -1.08
SDCBP-206ENST00000519115 TAS1R3Q7RTX0 852 aa8.3□□□□□ -1.08
SDCBP-206ENST00000519115 LRRC43Q8N309 656 aa8.3□□□□□ -1.08
SDCBP-206ENST00000519115 SMG8Q8ND04 991 aaKnown RBP8.3□□□□□ -1.08
SDCBP-206ENST00000519115 GOLGA5Q8TBA6 731 aa8.3□□□□□ -1.08
SDCBP-206ENST00000519115 SPIRE2Q8WWL2 714 aa8.3□□□□□ -1.08
SDCBP-206ENST00000519115 STAMQ92783 540 aa8.3□□□□□ -1.08
SDCBP-206ENST00000519115 CLP1Q92989 425 aaKnown RBP8.3□□□□□ -1.08
SDCBP-206ENST00000519115 HVCN1Q96D96 273 aa8.3□□□□□ -1.08
SDCBP-206ENST00000519115 CCDC51Q96ER9 411 aa8.3□□□□□ -1.08
SDCBP-206ENST00000519115 SAMD11Q96NU1 681 aa8.3□□□□□ -1.08
SDCBP-206ENST00000519115 CASD1Q96PB1 797 aa8.3□□□□□ -1.08
SDCBP-206ENST00000519115 TRAIPQ9BWF2 469 aa8.3□□□□□ -1.08
SDCBP-206ENST00000519115 TRIM6Q9C030 488 aaPredicted RBP8.3□□□□□ -1.08
SDCBP-206ENST00000519115 FZD8Q9H461 694 aa8.3□□□□□ -1.08
SDCBP-206ENST00000519115 THAP9Q9H5L6 903 aa8.3□□□□□ -1.08
SDCBP-206ENST00000519115 PDZD7Q9H5P4 517 aa8.3□□□□□ -1.08
SDCBP-206ENST00000519115 PARVGQ9HBI0 331 aa8.3□□□□□ -1.08
SDCBP-206ENST00000519115 TYW1Q9NV66 732 aaKnown RBP8.3□□□□□ -1.08
SDCBP-206ENST00000519115 PANK4Q9NVE7 773 aa8.3□□□□□ -1.08
SDCBP-206ENST00000519115 ARHGAP28Q9P2N2 729 aa8.3□□□□□ -1.08
SDCBP-206ENST00000519115 IPPQ9Y573 584 aa8.3□□□□□ -1.08
SDCBP-206ENST00000519115 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8.29□□□□□ -1.08
SDCBP-206ENST00000519115 A0A1B0GUA9 196 aa8.29□□□□□ -1.08
SDCBP-206ENST00000519115 K7ENM7 598 aa8.29□□□□□ -1.08
SDCBP-206ENST00000519115 K7ERI5 159 aa8.29□□□□□ -1.08
SDCBP-206ENST00000519115 ACKR2O00590 384 aa8.29□□□□□ -1.08
SDCBP-206ENST00000519115 PDXKO00764 312 aa8.29□□□□□ -1.08
SDCBP-206ENST00000519115 N4BP3O15049 544 aa8.29□□□□□ -1.08
SDCBP-206ENST00000519115 GRM6O15303 877 aa8.29□□□□□ -1.08
SDCBP-206ENST00000519115 ZNF623O75123 536 aa8.29□□□□□ -1.08
SDCBP-206ENST00000519115 SKIP12755 728 aa8.29□□□□□ -1.08
SDCBP-206ENST00000519115 ITGA4P13612 1032 aa8.29□□□□□ -1.08
SDCBP-206ENST00000519115 EEF1GP26641 437 aaKnown RBP8.29□□□□□ -1.08
SDCBP-206ENST00000519115 PRCPP42785 496 aa8.29□□□□□ -1.08
SDCBP-206ENST00000519115 AFF1P51825 1210 aaKnown RBP8.29□□□□□ -1.08
SDCBP-206ENST00000519115 ENPEPQ07075 957 aa8.29□□□□□ -1.08
SDCBP-206ENST00000519115 NCBP1Q09161 790 aaKnown RBP8.29□□□□□ -1.08
SDCBP-206ENST00000519115 STK4Q13043 487 aa8.29□□□□□ -1.08
SDCBP-206ENST00000519115 PAK1Q13153 545 aa8.29□□□□□ -1.08
SDCBP-206ENST00000519115 GPM6BQ13491 265 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms