RNA–Protein interactions for RNA: ENST00000518936.5

PCM1-210, Transcript of pericentriolar material 1, humanhuman

TSL 3

Gene PCM1, Length 710 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-210ENST00000518936 PPP2R3AQ06190 1150 aa23.22■■□□□ 1.31
PCM1-210ENST00000518936 EEF1DP3Q658K8 133 aa23.22■■□□□ 1.31
PCM1-210ENST00000518936 LRSAM1Q6UWE0 723 aa23.22■■□□□ 1.31
PCM1-210ENST00000518936 NT5DC4Q86YG4 428 aa23.22■■□□□ 1.31
PCM1-210ENST00000518936 TOP1MTQ969P6 601 aa23.22■■□□□ 1.31
PCM1-210ENST00000518936 GDF15Q99988 308 aa23.22■■□□□ 1.31
PCM1-210ENST00000518936 CBWD1Q9BRT8 395 aa23.22■■□□□ 1.31
PCM1-210ENST00000518936 EIF2AQ9BY44 585 aaKnown RBP23.22■■□□□ 1.31
PCM1-210ENST00000518936 OSBPL7Q9BZF2 842 aa23.22■■□□□ 1.31
PCM1-210ENST00000518936 SEMA6BQ9H3T3 888 aa23.22■■□□□ 1.31
PCM1-210ENST00000518936 RSAD1Q9HA92 442 aa23.22■■□□□ 1.31
PCM1-210ENST00000518936 METTL14Q9HCE5 456 aaKnown RBP23.22■■□□□ 1.31
PCM1-210ENST00000518936 DMAC2Q9NW81 257 aa23.22■■□□□ 1.31
PCM1-210ENST00000518936 TTLL13PA6NNM8 815 aa23.21■■□□□ 1.31
PCM1-210ENST00000518936 KRT13P13646 458 aa23.21■■□□□ 1.31
PCM1-210ENST00000518936 ANKRD40Q6AI12 368 aa23.21■■□□□ 1.31
PCM1-210ENST00000518936 TTI2Q6NXR4 508 aa23.21■■□□□ 1.31
PCM1-210ENST00000518936 INTS8Q75QN2 995 aaKnown RBP23.21■■□□□ 1.31
PCM1-210ENST00000518936 THNSL1Q8IYQ7 743 aa23.21■■□□□ 1.31
PCM1-210ENST00000518936 ENOX1Q8TC92 643 aaKnown RBP23.21■■□□□ 1.31
PCM1-210ENST00000518936 ZBTB45Q96K62 511 aaPredicted RBP23.21■■□□□ 1.31
PCM1-210ENST00000518936 RNPC3Q96LT9 517 aaKnown RBP23.21■■□□□ 1.31
PCM1-210ENST00000518936 FBXL18Q96ME1 805 aa23.21■■□□□ 1.31
PCM1-210ENST00000518936 ASB7Q9H672 318 aa23.21■■□□□ 1.31
PCM1-210ENST00000518936 PARP2Q9UGN5 583 aa23.21■■□□□ 1.31
PCM1-210ENST00000518936 CITO14578 2027 aa23.21■■□□□ 1.31
PCM1-210ENST00000518936 LOC101059915A0A1B0GWI6 518 aaPredicted RBP23.2■■□□□ 1.3
PCM1-210ENST00000518936 BECN2A8MW95 431 aa23.2■■□□□ 1.3
PCM1-210ENST00000518936 CLIC2O15247 247 aa23.2■■□□□ 1.3
PCM1-210ENST00000518936 ZNF445P59923 1031 aa23.2■■□□□ 1.3
PCM1-210ENST00000518936 MYL5Q02045 173 aa23.2■■□□□ 1.3
PCM1-210ENST00000518936 SNRNP35Q16560 246 aaKnown RBP23.2■■□□□ 1.3
PCM1-210ENST00000518936 ANO6Q4KMQ2 910 aa23.2■■□□□ 1.3
PCM1-210ENST00000518936 CEP135Q66GS9 1140 aa23.2■■□□□ 1.3
PCM1-210ENST00000518936 C16orf59Q7L2K0 433 aa23.2■■□□□ 1.3
PCM1-210ENST00000518936 FILIP1Q7Z7B0 1213 aa23.2■■□□□ 1.3
PCM1-210ENST00000518936 ZNF598Q86UK7 904 aaKnown RBP23.2■■□□□ 1.3
PCM1-210ENST00000518936 RTN4RL1Q86UN2 441 aaPredicted RBP23.2■■□□□ 1.3
PCM1-210ENST00000518936 CDR2LQ86X02 465 aaPredicted RBP23.2■■□□□ 1.3
PCM1-210ENST00000518936 RNF169Q8NCN4 708 aa23.2■■□□□ 1.3
PCM1-210ENST00000518936 ANKRD20A12PQ8NF67 263 aa23.2■■□□□ 1.3
PCM1-210ENST00000518936 LINC01599Q8WXQ3 324 aa23.2■■□□□ 1.3
PCM1-210ENST00000518936 FAM213AQ9BRX8 229 aa23.2■■□□□ 1.3
PCM1-210ENST00000518936 NXF3Q9H4D5 531 aaKnown RBP23.2■■□□□ 1.3
PCM1-210ENST00000518936 PCIF1Q9H4Z3 704 aa23.2■■□□□ 1.3
PCM1-210ENST00000518936 SLC38A7Q9NVC3 462 aa23.2■■□□□ 1.3
PCM1-210ENST00000518936 RBAKQ9NYW8 714 aaPredicted RBP23.2■■□□□ 1.3
PCM1-210ENST00000518936 MAGEC2Q9UBF1 373 aaPredicted RBP23.2■■□□□ 1.3
PCM1-210ENST00000518936 CPSF3Q9UKF6 684 aaKnown RBP23.2■■□□□ 1.3
PCM1-210ENST00000518936 DERAQ9Y315 318 aa23.2■■□□□ 1.3
PCM1-210ENST00000518936 A0A1W2PPC1 479 aa23.19■■□□□ 1.3
PCM1-210ENST00000518936 IKBKBO14920 756 aa23.19■■□□□ 1.3
PCM1-210ENST00000518936 STX10O60499 249 aa23.19■■□□□ 1.3
PCM1-210ENST00000518936 ZNF165P49910 485 aa23.19■■□□□ 1.3
PCM1-210ENST00000518936 SPATA1Q5VX52 437 aa23.19■■□□□ 1.3
PCM1-210ENST00000518936 BRSK2Q8IWQ3 736 aa23.19■■□□□ 1.3
PCM1-210ENST00000518936 ZC3H3Q8IXZ2 948 aaKnown RBP23.19■■□□□ 1.3
PCM1-210ENST00000518936 SMG8Q8ND04 991 aaKnown RBP23.19■■□□□ 1.3
PCM1-210ENST00000518936 VWCEQ96DN2 955 aa23.19■■□□□ 1.3
PCM1-210ENST00000518936 FNBP1Q96RU3 617 aa23.19■■□□□ 1.3
PCM1-210ENST00000518936 ZBED2Q9BTP6 218 aa23.19■■□□□ 1.3
PCM1-210ENST00000518936 FUCA2Q9BTY2 467 aa23.19■■□□□ 1.3
PCM1-210ENST00000518936 GZF1Q9H116 711 aaPredicted RBP23.19■■□□□ 1.3
PCM1-210ENST00000518936 DNAJC25Q9H1X3 360 aa23.19■■□□□ 1.3
PCM1-210ENST00000518936 TSPY26PQ9H489 355 aa23.19■■□□□ 1.3
PCM1-210ENST00000518936 SNTG2Q9NY99 539 aa23.19■■□□□ 1.3
PCM1-210ENST00000518936 USP20Q9Y2K6 914 aa23.19■■□□□ 1.3
PCM1-210ENST00000518936 PDE4DIPQ5VU43 2346 aa23.18■■□□□ 1.3
PCM1-210ENST00000518936 RECQL4O94761 1208 aa23.18■■□□□ 1.3
PCM1-210ENST00000518936 TPM2P07951 284 aa23.18■■□□□ 1.3
PCM1-210ENST00000518936 ATP2A2P16615 1042 aaKnown RBP23.18■■□□□ 1.3
PCM1-210ENST00000518936 AP3M2P53677 418 aa23.18■■□□□ 1.3
PCM1-210ENST00000518936 FAM186BQ8IYM0 893 aa23.18■■□□□ 1.3
PCM1-210ENST00000518936 CACTINQ8WUQ7 758 aaKnown RBP23.18■■□□□ 1.3
PCM1-210ENST00000518936 SAAL1Q96ER3 474 aa23.18■■□□□ 1.3
PCM1-210ENST00000518936 TMEM117Q9H0C3 514 aa23.18■■□□□ 1.3
PCM1-210ENST00000518936 THAP9Q9H5L6 903 aa23.18■■□□□ 1.3
PCM1-210ENST00000518936 INSL6Q9Y581 213 aa23.18■■□□□ 1.3
PCM1-210ENST00000518936 RALGAPA2Q2PPJ7 1873 aa23.17■■□□□ 1.3
PCM1-210ENST00000518936 INPPL1O15357 1258 aa23.17■■□□□ 1.3
PCM1-210ENST00000518936 ACOT2P49753 483 aa23.17■■□□□ 1.3
PCM1-210ENST00000518936 STX17P56962 302 aa23.17■■□□□ 1.3
PCM1-210ENST00000518936 SPAG1Q07617 926 aa23.17■■□□□ 1.3
PCM1-210ENST00000518936 RASIP1Q5U651 963 aa23.17■■□□□ 1.3
PCM1-210ENST00000518936 FRMD5Q7Z6J6 570 aa23.17■■□□□ 1.3
PCM1-210ENST00000518936 APOL6Q9BWW8 343 aa23.17■■□□□ 1.3
PCM1-210ENST00000518936 TNRC18O15417 2968 aaPredicted RBP23.16■■□□□ 1.3
PCM1-210ENST00000518936 TRIM49BA6NDI0 452 aa23.16■■□□□ 1.3
PCM1-210ENST00000518936 TISP43B9A030 160 aa23.16■■□□□ 1.3
PCM1-210ENST00000518936 GOLGA6L19H0YKK7 550 aa23.16■■□□□ 1.3
PCM1-210ENST00000518936 FAM189A1O60320 539 aa23.16■■□□□ 1.3
PCM1-210ENST00000518936 EPHB4P54760 987 aa23.16■■□□□ 1.3
PCM1-210ENST00000518936 OSTNP61366 133 aa23.16■■□□□ 1.3
PCM1-210ENST00000518936 CCDC40Q4G0X9 1142 aa23.16■■□□□ 1.3
PCM1-210ENST00000518936 LIN28BQ6ZN17 250 aaKnown RBP eCLIP23.16■■□□□ 1.3
PCM1-210ENST00000518936 SNX27Q96L92 541 aa23.16■■□□□ 1.3
PCM1-210ENST00000518936 FAM193BQ96PV7 902 aaPredicted RBP23.16■■□□□ 1.3
PCM1-210ENST00000518936 YME1L1Q96TA2 773 aa23.16■■□□□ 1.3
PCM1-210ENST00000518936 SRRTQ9BXP5 876 aaKnown RBP23.16■■□□□ 1.3
PCM1-210ENST00000518936 CNTN3Q9P232 1028 aa23.16■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms