RNA–Protein interactions for RNA: ENST00000518931.1

SQLE-203, Transcript of squalene epoxidase, humanhuman

TSL 4

Gene SQLE, Length 554 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-203ENST00000518931 BTNL9Q6UXG8 535 aa7.08□□□□□ -1.28
SQLE-203ENST00000518931 GLB1L3Q8NCI6 653 aaPredicted RBP7.08□□□□□ -1.28
SQLE-203ENST00000518931 PAWRQ96IZ0 340 aaKnown RBP7.08□□□□□ -1.28
SQLE-203ENST00000518931 SMAD5Q99717 465 aaKnown RBP7.08□□□□□ -1.28
SQLE-203ENST00000518931 TCF25Q9BQ70 676 aa7.08□□□□□ -1.28
SQLE-203ENST00000518931 ASPSCR1Q9BZE9 553 aa7.08□□□□□ -1.28
SQLE-203ENST00000518931 DEF6Q9H4E7 631 aa7.08□□□□□ -1.28
SQLE-203ENST00000518931 TLR9Q9NR96 1032 aa7.08□□□□□ -1.28
SQLE-203ENST00000518931 SMPD4Q9NXE4 827 aa7.08□□□□□ -1.28
SQLE-203ENST00000518931 FEZ2Q9UHY8 353 aaPredicted RBP7.08□□□□□ -1.28
SQLE-203ENST00000518931 FBXO2Q9UK22 296 aaPredicted RBP7.08□□□□□ -1.28
SQLE-203ENST00000518931 GPR45Q9Y5Y3 372 aa7.08□□□□□ -1.28
SQLE-203ENST00000518931 SHTN1A0MZ66 631 aa7.07□□□□□ -1.28
SQLE-203ENST00000518931 GOLGA6CA6NDK9 693 aa7.07□□□□□ -1.28
SQLE-203ENST00000518931 GOLGA6BA6NDN3 693 aa7.07□□□□□ -1.28
SQLE-203ENST00000518931 MTSS1O43312 755 aa7.07□□□□□ -1.28
SQLE-203ENST00000518931 TMEM127O75204 238 aa7.07□□□□□ -1.28
SQLE-203ENST00000518931 SCGB1D2O95969 90 aa7.07□□□□□ -1.28
SQLE-203ENST00000518931 CT47B1P0C2W7 299 aaPredicted RBP7.07□□□□□ -1.28
SQLE-203ENST00000518931 GOLGA6DP0CG33 693 aa7.07□□□□□ -1.28
SQLE-203ENST00000518931 MSX2P35548 267 aaPredicted RBP7.07□□□□□ -1.28
SQLE-203ENST00000518931 NPEPPSP55786 919 aa7.07□□□□□ -1.28
SQLE-203ENST00000518931 MEF2AQ02078 507 aaPredicted RBP7.07□□□□□ -1.28
SQLE-203ENST00000518931 ACAP2Q15057 778 aa7.07□□□□□ -1.28
SQLE-203ENST00000518931 PCBP2Q15366 365 aaKnown RBP eCLIP7.07□□□□□ -1.28
SQLE-203ENST00000518931 PTPN21Q16825 1174 aa7.07□□□□□ -1.28
SQLE-203ENST00000518931 ANO4Q32M45 955 aa7.07□□□□□ -1.28
SQLE-203ENST00000518931 C19orf54Q5BKX5 351 aa7.07□□□□□ -1.28
SQLE-203ENST00000518931 MUM1L1Q5H9M0 696 aa7.07□□□□□ -1.28
SQLE-203ENST00000518931 FAM111BQ6SJ93 734 aa7.07□□□□□ -1.28
SQLE-203ENST00000518931 PPM1NQ8N819 430 aa7.07□□□□□ -1.28
SQLE-203ENST00000518931 OR5M3Q8NGP4 307 aa7.07□□□□□ -1.28
SQLE-203ENST00000518931 SNX33Q8WV41 574 aa7.07□□□□□ -1.28
SQLE-203ENST00000518931 RIN2Q8WYP3 895 aaPredicted RBP7.07□□□□□ -1.28
SQLE-203ENST00000518931 C8orf49Q96NF6 230 aa7.07□□□□□ -1.28
SQLE-203ENST00000518931 WWC2-AS2Q96NR7 200 aa7.07□□□□□ -1.28
SQLE-203ENST00000518931 CD248Q9HCU0 757 aa7.07□□□□□ -1.28
SQLE-203ENST00000518931 GOLGA6AQ9NYA3 693 aa7.07□□□□□ -1.28
SQLE-203ENST00000518931 ASAP1Q9ULH1 1129 aa7.07□□□□□ -1.28
SQLE-203ENST00000518931 ZBTB21Q9ULJ3 1066 aa7.07□□□□□ -1.28
SQLE-203ENST00000518931 RABGAP1Q9Y3P9 1069 aa7.07□□□□□ -1.28
SQLE-203ENST00000518931 PCDHGA2Q9Y5H1 932 aa7.07□□□□□ -1.28
SQLE-203ENST00000518931 RPTORQ8N122 1335 aa7.06□□□□□ -1.28
SQLE-203ENST00000518931 KLHL33A6NCF5 533 aa7.06□□□□□ -1.28
SQLE-203ENST00000518931 KRTAP9-7A8MTY7 169 aa7.06□□□□□ -1.28
SQLE-203ENST00000518931 PCDHGA12O60330 932 aa7.06□□□□□ -1.28
SQLE-203ENST00000518931 RNASEH2AO75792 299 aaKnown RBP7.06□□□□□ -1.28
SQLE-203ENST00000518931 RBP3P10745 1247 aa7.06□□□□□ -1.28
SQLE-203ENST00000518931 GSPT1P15170 499 aaKnown RBP7.06□□□□□ -1.28
SQLE-203ENST00000518931 ADSLP30566 484 aaPredicted RBP7.06□□□□□ -1.28
SQLE-203ENST00000518931 CASRP41180 1078 aa7.06□□□□□ -1.28
SQLE-203ENST00000518931 ZNF585AQ6P3V2 769 aa7.06□□□□□ -1.28
SQLE-203ENST00000518931 SLC4A10Q6U841 1118 aa7.06□□□□□ -1.28
SQLE-203ENST00000518931 GPR156Q8NFN8 814 aa7.06□□□□□ -1.28
SQLE-203ENST00000518931 TTC14Q96N46 770 aa7.06□□□□□ -1.28
SQLE-203ENST00000518931 GREM2Q9H772 168 aa7.06□□□□□ -1.28
SQLE-203ENST00000518931 POLG2Q9UHN1 485 aa7.06□□□□□ -1.28
SQLE-203ENST00000518931 GTF2A1LQ9UNN4 478 aa7.06□□□□□ -1.28
SQLE-203ENST00000518931 PCDHGA9Q9Y5G4 932 aaKnown RBP7.06□□□□□ -1.28
SQLE-203ENST00000518931 PCDHGA8Q9Y5G5 932 aa7.06□□□□□ -1.28
SQLE-203ENST00000518931 PCDHGA7Q9Y5G6 932 aa7.06□□□□□ -1.28
SQLE-203ENST00000518931 PCDHGA6Q9Y5G7 932 aa7.06□□□□□ -1.28
SQLE-203ENST00000518931 PCDHGA3Q9Y5H0 932 aa7.06□□□□□ -1.28
SQLE-203ENST00000518931 SLC30A1Q9Y6M5 507 aa7.06□□□□□ -1.28
SQLE-203ENST00000518931 B8ZZF3 427 aa7.05□□□□□ -1.28
SQLE-203ENST00000518931 NRP1O14786 923 aa7.05□□□□□ -1.28
SQLE-203ENST00000518931 XPOTO43592 962 aaKnown RBP7.05□□□□□ -1.28
SQLE-203ENST00000518931 AKR1B10O60218 316 aa7.05□□□□□ -1.28
SQLE-203ENST00000518931 IFIT2P09913 472 aaKnown RBP7.05□□□□□ -1.28
SQLE-203ENST00000518931 COMTP21964 271 aa7.05□□□□□ -1.28
SQLE-203ENST00000518931 CCND1P24385 295 aa7.05□□□□□ -1.28
SQLE-203ENST00000518931 MAGEA10P43363 369 aaPredicted RBP7.05□□□□□ -1.28
SQLE-203ENST00000518931 WNT3AP56704 352 aa7.05□□□□□ -1.28
SQLE-203ENST00000518931 DUSP2Q05923 314 aa7.05□□□□□ -1.28
SQLE-203ENST00000518931 MALLQ13021 153 aa7.05□□□□□ -1.28
SQLE-203ENST00000518931 CDC37Q16543 378 aaPredicted RBP7.05□□□□□ -1.28
SQLE-203ENST00000518931 MBNL2Q5VZF2 373 aaKnown RBP7.05□□□□□ -1.28
SQLE-203ENST00000518931 POLNQ7Z5Q5 900 aa7.05□□□□□ -1.28
SQLE-203ENST00000518931 KRT77Q7Z794 578 aa7.05□□□□□ -1.28
SQLE-203ENST00000518931 C14orf80Q86SX3 495 aa7.05□□□□□ -1.28
SQLE-203ENST00000518931 CPXCR1Q8N123 301 aa7.05□□□□□ -1.28
SQLE-203ENST00000518931 D2HGDHQ8N465 521 aa7.05□□□□□ -1.28
SQLE-203ENST00000518931 TTC9BQ8N6N2 239 aa7.05□□□□□ -1.28
SQLE-203ENST00000518931 JADE3Q92613 823 aa7.05□□□□□ -1.28
SQLE-203ENST00000518931 ARL8AQ96BM9 186 aa7.05□□□□□ -1.28
SQLE-203ENST00000518931 DMRT3Q9NQL9 472 aa7.05□□□□□ -1.28
SQLE-203ENST00000518931 ZNF277Q9NRM2 450 aaPredicted RBP7.05□□□□□ -1.28
SQLE-203ENST00000518931 MRFAP1Q9Y605 127 aa7.05□□□□□ -1.28
SQLE-203ENST00000518931 DYTNA2CJ06 578 aa7.04□□□□□ -1.28
SQLE-203ENST00000518931 FZD9O00144 591 aa7.04□□□□□ -1.28
SQLE-203ENST00000518931 PPM1FP49593 454 aaPredicted RBP7.04□□□□□ -1.28
SQLE-203ENST00000518931 TERF1P54274 439 aa7.04□□□□□ -1.28
SQLE-203ENST00000518931 EFEMP1Q12805 493 aa7.04□□□□□ -1.28
SQLE-203ENST00000518931 HS1BP3Q53T59 392 aa7.04□□□□□ -1.28
SQLE-203ENST00000518931 FAM180AQ6UWF9 173 aa7.04□□□□□ -1.28
SQLE-203ENST00000518931 Q6ZSN1 163 aa7.04□□□□□ -1.28
SQLE-203ENST00000518931 PRRT2Q7Z6L0 340 aaPredicted RBP7.04□□□□□ -1.28
SQLE-203ENST00000518931 PNMA8AQ86V59 439 aaPredicted RBP7.04□□□□□ -1.28
SQLE-203ENST00000518931 SGMS1Q86VZ5 419 aa7.04□□□□□ -1.28
SQLE-203ENST00000518931 TTC8Q8TAM2 541 aa7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms