RNA–Protein interactions for RNA: ENST00000518825.5

CTNNA1-210, Transcript of catenin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene CTNNA1, Length 3,536 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-210ENST00000518825 DLGAP5Q15398 846 aa9.09□□□□□ -0.95
CTNNA1-210ENST00000518825 NIPA1Q7RTP0 329 aa9.09□□□□□ -0.95
CTNNA1-210ENST00000518825 CPXCR1Q8N123 301 aa9.09□□□□□ -0.95
CTNNA1-210ENST00000518825 ZNF341Q9BYN7 854 aa9.09□□□□□ -0.95
CTNNA1-210ENST00000518825 RAVER2Q9HCJ3 691 aaKnown RBP9.09□□□□□ -0.95
CTNNA1-210ENST00000518825 TBX20Q9UMR3 447 aa9.09□□□□□ -0.95
CTNNA1-210ENST00000518825 GOLGA6L10A0A0M3HER8 536 aa9.08□□□□□ -0.96
CTNNA1-210ENST00000518825 O00370 1275 aa9.08□□□□□ -0.96
CTNNA1-210ENST00000518825 RIPK2O43353 540 aa9.08□□□□□ -0.96
CTNNA1-210ENST00000518825 CNGA1P29973 690 aa9.08□□□□□ -0.96
CTNNA1-210ENST00000518825 RPS6P62753 249 aaKnown RBP9.08□□□□□ -0.96
CTNNA1-210ENST00000518825 IFFO1Q0D2I5 559 aa9.08□□□□□ -0.96
CTNNA1-210ENST00000518825 NBPF9Q3BBW0 867 aa9.08□□□□□ -0.96
CTNNA1-210ENST00000518825 RNF187Q5TA31 235 aaPredicted RBP9.08□□□□□ -0.96
CTNNA1-210ENST00000518825 SCARA3Q6AZY7 606 aa9.08□□□□□ -0.96
CTNNA1-210ENST00000518825 UBL4BQ8N7F7 174 aa9.08□□□□□ -0.96
CTNNA1-210ENST00000518825 C3orf20Q8ND61 904 aa9.08□□□□□ -0.96
CTNNA1-210ENST00000518825 XPO6Q96QU8 1125 aaKnown RBP9.08□□□□□ -0.96
CTNNA1-210ENST00000518825 PI4K2AQ9BTU6 479 aa9.08□□□□□ -0.96
CTNNA1-210ENST00000518825 EHMT1Q9H9B1 1298 aa9.08□□□□□ -0.96
CTNNA1-210ENST00000518825 SMIM23A6NLE4 172 aa9.08□□□□□ -0.96
CTNNA1-210ENST00000518825 CLDN3O15551 220 aa9.08□□□□□ -0.96
CTNNA1-210ENST00000518825 IVDP26440 423 aa9.08□□□□□ -0.96
CTNNA1-210ENST00000518825 GPC3P51654 580 aa9.08□□□□□ -0.96
CTNNA1-210ENST00000518825 C2CD6Q53TS8 623 aa9.08□□□□□ -0.96
CTNNA1-210ENST00000518825 TAS1R3Q7RTX0 852 aa9.08□□□□□ -0.96
CTNNA1-210ENST00000518825 FMNL3Q8IVF7 1028 aa9.08□□□□□ -0.96
CTNNA1-210ENST00000518825 C4orf19Q8IY42 314 aa9.08□□□□□ -0.96
CTNNA1-210ENST00000518825 CCT6BQ92526 530 aa9.08□□□□□ -0.96
CTNNA1-210ENST00000518825 ZNF516Q92618 1163 aa9.08□□□□□ -0.96
CTNNA1-210ENST00000518825 CNKSR1Q969H4 720 aa9.08□□□□□ -0.96
CTNNA1-210ENST00000518825 CENPTQ96BT3 561 aa9.08□□□□□ -0.96
CTNNA1-210ENST00000518825 FBXL18Q96ME1 805 aa9.08□□□□□ -0.96
CTNNA1-210ENST00000518825 DDX23Q9BUQ8 820 aaKnown RBP9.08□□□□□ -0.96
CTNNA1-210ENST00000518825 FAM129AQ9BZQ8 928 aa9.08□□□□□ -0.96
CTNNA1-210ENST00000518825 PDGFDQ9GZP0 370 aaPredicted RBP9.08□□□□□ -0.96
CTNNA1-210ENST00000518825 WNT8AQ9H1J5 351 aa9.08□□□□□ -0.96
CTNNA1-210ENST00000518825 ZNF862O60290 1169 aa9.08□□□□□ -0.96
CTNNA1-210ENST00000518825 KIAA0754O94854 1291 aa9.08□□□□□ -0.96
CTNNA1-210ENST00000518825 CFHP08603 1231 aa9.08□□□□□ -0.96
CTNNA1-210ENST00000518825 DLATP10515 647 aaKnown RBP9.08□□□□□ -0.96
CTNNA1-210ENST00000518825 CREB1P16220 341 aa9.08□□□□□ -0.96
CTNNA1-210ENST00000518825 SLCO1A2P46721 670 aa9.08□□□□□ -0.96
CTNNA1-210ENST00000518825 CDR2Q01850 454 aa9.08□□□□□ -0.96
CTNNA1-210ENST00000518825 ALCAMQ13740 583 aa9.08□□□□□ -0.96
CTNNA1-210ENST00000518825 AUHQ13825 339 aaKnown RBP9.08□□□□□ -0.96
CTNNA1-210ENST00000518825 PPP2R5EQ16537 467 aa9.08□□□□□ -0.96
CTNNA1-210ENST00000518825 ANKRD20A8PQ5CZ79 823 aa9.08□□□□□ -0.96
CTNNA1-210ENST00000518825 FAM102BQ5T8I3 360 aa9.08□□□□□ -0.96
CTNNA1-210ENST00000518825 ANKS1BQ7Z6G8 1248 aa9.08□□□□□ -0.96
CTNNA1-210ENST00000518825 MAP4K3Q8IVH8 894 aa9.08□□□□□ -0.96
CTNNA1-210ENST00000518825 C12orf50Q8NA57 414 aaPredicted RBP9.08□□□□□ -0.96
CTNNA1-210ENST00000518825 ZBED3Q96IU2 234 aaPredicted RBP9.08□□□□□ -0.96
CTNNA1-210ENST00000518825 SLC38A10Q9HBR0 1119 aa9.08□□□□□ -0.96
CTNNA1-210ENST00000518825 ZNF277Q9NRM2 450 aaPredicted RBP9.08□□□□□ -0.96
CTNNA1-210ENST00000518825 TLDC2A0PJX2 215 aa9.07□□□□□ -0.96
CTNNA1-210ENST00000518825 EGFRP00533 1210 aa9.07□□□□□ -0.96
CTNNA1-210ENST00000518825 CHKAP35790 457 aa9.07□□□□□ -0.96
CTNNA1-210ENST00000518825 SF3A3Q12874 501 aaKnown RBP eCLIP9.07□□□□□ -0.963e-7■■■□□ 16.9
CTNNA1-210ENST00000518825 RHBDF2Q6PJF5 856 aa9.07□□□□□ -0.96
CTNNA1-210ENST00000518825 SV2AQ7L0J3 742 aa9.07□□□□□ -0.96
CTNNA1-210ENST00000518825 PHLDB2Q86SQ0 1253 aa9.07□□□□□ -0.96
CTNNA1-210ENST00000518825 C1orf54Q8WWF1 131 aa9.07□□□□□ -0.96
CTNNA1-210ENST00000518825 ZNF653Q96CK0 615 aa9.07□□□□□ -0.96
CTNNA1-210ENST00000518825 MFSD14AQ96MC6 490 aa9.07□□□□□ -0.96
CTNNA1-210ENST00000518825 LRRC19Q9H756 370 aa9.07□□□□□ -0.96
CTNNA1-210ENST00000518825 CHST7Q9NS84 486 aa9.07□□□□□ -0.96
CTNNA1-210ENST00000518825 CNOT7Q9UIV1 285 aaKnown RBP9.07□□□□□ -0.96
CTNNA1-210ENST00000518825 GTF3C4Q9UKN8 822 aa9.07□□□□□ -0.96
CTNNA1-210ENST00000518825 RIPK3Q9Y572 518 aa9.07□□□□□ -0.96
CTNNA1-210ENST00000518825 MROH7Q68CQ1 1323 aa9.07□□□□□ -0.96
CTNNA1-210ENST00000518825 RGPD3A6NKT7 1758 aaPredicted RBP9.07□□□□□ -0.96
CTNNA1-210ENST00000518825 RGPD4Q7Z3J3 1758 aa9.07□□□□□ -0.96
CTNNA1-210ENST00000518825 DOCK5Q9H7D0 1870 aa9.07□□□□□ -0.96
CTNNA1-210ENST00000518825 CTNND1O60716 968 aaKnown RBP9.07□□□□□ -0.96
CTNNA1-210ENST00000518825 UNGP13051 313 aaPredicted RBP9.07□□□□□ -0.96
CTNNA1-210ENST00000518825 CCDC38Q502W7 563 aa9.07□□□□□ -0.96
CTNNA1-210ENST00000518825 DENND2CQ68D51 928 aa9.07□□□□□ -0.96
CTNNA1-210ENST00000518825 KRT39Q6A163 491 aa9.07□□□□□ -0.96
CTNNA1-210ENST00000518825 FLAD1Q8NFF5 587 aa9.07□□□□□ -0.96
CTNNA1-210ENST00000518825 ATG4AQ8WYN0 398 aa9.07□□□□□ -0.96
CTNNA1-210ENST00000518825 CHMP6Q96FZ7 201 aa9.07□□□□□ -0.96
CTNNA1-210ENST00000518825 PWWP2AQ96N64 755 aa9.07□□□□□ -0.96
CTNNA1-210ENST00000518825 RAB20Q9NX57 234 aa9.07□□□□□ -0.96
CTNNA1-210ENST00000518825 TMOD2Q9NZR1 351 aa9.07□□□□□ -0.96
CTNNA1-210ENST00000518825 PODXLO00592 558 aa9.06□□□□□ -0.96
CTNNA1-210ENST00000518825 FSCN2O14926 492 aa9.06□□□□□ -0.96
CTNNA1-210ENST00000518825 RGS20O76081 388 aa9.06□□□□□ -0.96
CTNNA1-210ENST00000518825 RARGP13631 454 aa9.06□□□□□ -0.96
CTNNA1-210ENST00000518825 CETN1Q12798 172 aa9.06□□□□□ -0.96
CTNNA1-210ENST00000518825 MICALCLQ6ZW33 695 aa9.06□□□□□ -0.96
CTNNA1-210ENST00000518825 PIGWQ7Z7B1 504 aa9.06□□□□□ -0.96
CTNNA1-210ENST00000518825 FAM228AQ86W67 206 aa9.06□□□□□ -0.96
CTNNA1-210ENST00000518825 TMEM109Q9BVC6 243 aa9.06□□□□□ -0.96
CTNNA1-210ENST00000518825 TMEM8AQ9HCN3 771 aa9.06□□□□□ -0.96
CTNNA1-210ENST00000518825 R3HDM2Q9Y2K5 976 aaKnown RBP9.06□□□□□ -0.96
CTNNA1-210ENST00000518825 MYPNQ86TC9 1320 aa9.06□□□□□ -0.96
CTNNA1-210ENST00000518825 DENND3A2RUS2 1198 aa9.06□□□□□ -0.96
CTNNA1-210ENST00000518825 WNT10BO00744 389 aa9.06□□□□□ -0.96
CTNNA1-210ENST00000518825 GGPS1O95749 300 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms