RNA–Protein interactions for RNA: ENST00000518538.5

VEGFA-217, Transcript of vascular endothelial growth factor A, humanhuman

TSL 2

Gene VEGFA, Length 535 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-217ENST00000518538 GBP3Q9H0R5 595 aa24.07■■□□□ 1.44
VEGFA-217ENST00000518538 MIOSQ9NXC5 875 aa24.07■■□□□ 1.44
VEGFA-217ENST00000518538 SPG21Q9NZD8 308 aa24.07■■□□□ 1.44
VEGFA-217ENST00000518538 PCDHB13Q9Y5F0 798 aa24.07■■□□□ 1.44
VEGFA-217ENST00000518538 B4GALT3O60512 393 aa24.06■■□□□ 1.44
VEGFA-217ENST00000518538 HARSP12081 509 aaKnown RBP24.06■■□□□ 1.44
VEGFA-217ENST00000518538 CASP1P29466 404 aa24.06■■□□□ 1.44
VEGFA-217ENST00000518538 CASP5P51878 434 aa24.06■■□□□ 1.44
VEGFA-217ENST00000518538 PLCB3Q01970 1234 aa24.06■■□□□ 1.44
VEGFA-217ENST00000518538 UBE3AQ05086 875 aa24.06■■□□□ 1.44
VEGFA-217ENST00000518538 GRIK3Q13003 919 aa24.06■■□□□ 1.44
VEGFA-217ENST00000518538 CUL4BQ13620 913 aa24.06■■□□□ 1.44
VEGFA-217ENST00000518538 L1TD1Q5T7N2 865 aaKnown RBP24.06■■□□□ 1.44
VEGFA-217ENST00000518538 GRAMD1CQ8IYS0 662 aa24.06■■□□□ 1.44
VEGFA-217ENST00000518538 SLC39A11Q8N1S5 342 aa24.06■■□□□ 1.44
VEGFA-217ENST00000518538 DNAJB4Q9UDY4 337 aa24.06■■□□□ 1.44
VEGFA-217ENST00000518538 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP24.05■■□□□ 1.44
VEGFA-217ENST00000518538 PVALEFA0A1B0GWK0 134 aa24.05■■□□□ 1.44
VEGFA-217ENST00000518538 MYL1P05976 194 aa24.05■■□□□ 1.44
VEGFA-217ENST00000518538 GALTP07902 379 aa24.05■■□□□ 1.44
VEGFA-217ENST00000518538 MYBP10242 640 aa24.05■■□□□ 1.44
VEGFA-217ENST00000518538 MATR3P43243 847 aaKnown RBP eCLIP24.05■■□□□ 1.44
VEGFA-217ENST00000518538 YARSP54577 528 aaKnown RBP24.05■■□□□ 1.44
VEGFA-217ENST00000518538 DSC1Q08554 894 aa24.05■■□□□ 1.44
VEGFA-217ENST00000518538 MICALL1Q8N3F8 863 aa24.05■■□□□ 1.44
VEGFA-217ENST00000518538 POF1BQ8WVV4 589 aa24.05■■□□□ 1.44
VEGFA-217ENST00000518538 ACCSQ96QU6 501 aa24.05■■□□□ 1.44
VEGFA-217ENST00000518538 FGFBP2Q9BYJ0 223 aa24.05■■□□□ 1.44
VEGFA-217ENST00000518538 HAPLN2Q9GZV7 340 aa24.05■■□□□ 1.44
VEGFA-217ENST00000518538 TOPORSQ9NS56 1045 aaPredicted RBP24.05■■□□□ 1.44
VEGFA-217ENST00000518538 EXOC7Q9UPT5 735 aa24.05■■□□□ 1.44
VEGFA-217ENST00000518538 LZTS1Q9Y250 596 aa24.05■■□□□ 1.44
VEGFA-217ENST00000518538 PTGESO14684 152 aa24.04■■□□□ 1.44
VEGFA-217ENST00000518538 ZNF202O95125 648 aa24.04■■□□□ 1.44
VEGFA-217ENST00000518538 DNAJB1P25685 340 aa24.04■■□□□ 1.44
VEGFA-217ENST00000518538 SLC11A1P49279 550 aa24.04■■□□□ 1.44
VEGFA-217ENST00000518538 OSTNP61366 133 aa24.04■■□□□ 1.44
VEGFA-217ENST00000518538 EHHADHQ08426 723 aa24.04■■□□□ 1.44
VEGFA-217ENST00000518538 TIGD5Q53EQ6 642 aa24.04■■□□□ 1.44
VEGFA-217ENST00000518538 FAM26FQ5R3K3 315 aa24.04■■□□□ 1.44
VEGFA-217ENST00000518538 SLC39A4Q6P5W5 647 aa24.04■■□□□ 1.44
VEGFA-217ENST00000518538 KRBA2Q6ZNG9 492 aa24.04■■□□□ 1.44
VEGFA-217ENST00000518538 STXBP4Q6ZWJ1 553 aa24.04■■□□□ 1.44
VEGFA-217ENST00000518538 COLGALT2Q8IYK4 626 aa24.04■■□□□ 1.44
VEGFA-217ENST00000518538 ACAP3Q96P50 834 aa24.04■■□□□ 1.44
VEGFA-217ENST00000518538 TSHZ2Q9NRE2 1034 aa24.04■■□□□ 1.44
VEGFA-217ENST00000518538 NT5C1B-RDH14C9J2C7 533 aa24.03■■□□□ 1.44
VEGFA-217ENST00000518538 KRT17Q04695 432 aa24.03■■□□□ 1.44
VEGFA-217ENST00000518538 KCNA1Q09470 495 aa24.03■■□□□ 1.44
VEGFA-217ENST00000518538 CAMK1Q14012 370 aa24.03■■□□□ 1.44
VEGFA-217ENST00000518538 KYAT1Q16773 422 aa24.03■■□□□ 1.44
VEGFA-217ENST00000518538 HPS3Q969F9 1004 aa24.03■■□□□ 1.44
VEGFA-217ENST00000518538 PLXNA4Q9HCM2 1894 aa24.02■■□□□ 1.44
VEGFA-217ENST00000518538 A0A0B4J269 797 aa24.02■■□□□ 1.44
VEGFA-217ENST00000518538 ANKRD63C9JTQ0 380 aa24.02■■□□□ 1.44
VEGFA-217ENST00000518538 ALDH2P05091 517 aa24.02■■□□□ 1.44
VEGFA-217ENST00000518538 THP07101 528 aa24.02■■□□□ 1.44
VEGFA-217ENST00000518538 CCDC85BQ15834 202 aaPredicted RBP24.02■■□□□ 1.44
VEGFA-217ENST00000518538 XKR4Q5GH76 650 aa24.02■■□□□ 1.44
VEGFA-217ENST00000518538 SLFN12LQ6IEE8 588 aa24.02■■□□□ 1.44
VEGFA-217ENST00000518538 ALKAL1Q6UXT8 129 aa24.02■■□□□ 1.44
VEGFA-217ENST00000518538 TMEM173Q86WV6 379 aaPredicted RBP24.02■■□□□ 1.44
VEGFA-217ENST00000518538 PPM1EQ8WY54 764 aa24.02■■□□□ 1.44
VEGFA-217ENST00000518538 TMEM169Q96HH4 297 aa24.02■■□□□ 1.44
VEGFA-217ENST00000518538 IGSF21Q96ID5 467 aa24.02■■□□□ 1.44
VEGFA-217ENST00000518538 SNX27Q96L92 541 aa24.02■■□□□ 1.44
VEGFA-217ENST00000518538 IPO9Q96P70 1041 aaKnown RBP24.02■■□□□ 1.44
VEGFA-217ENST00000518538 CXCL16Q9H2A7 254 aa24.02■■□□□ 1.44
VEGFA-217ENST00000518538 PUF60Q9UHX1 559 aaKnown RBP24.02■■□□□ 1.44
VEGFA-217ENST00000518538 FAN1Q9Y2M0 1017 aa24.02■■□□□ 1.44
VEGFA-217ENST00000518538 STYXL1Q9Y6J8 313 aa24.02■■□□□ 1.44
VEGFA-217ENST00000518538 TRANK1O15050 2925 aa24.02■■□□□ 1.44
VEGFA-217ENST00000518538 TDRD15B5MCY1 1934 aaKnown RBP24.02■■□□□ 1.44
VEGFA-217ENST00000518538 NRP1O14786 923 aa24.01■■□□□ 1.43
VEGFA-217ENST00000518538 OGTO15294 1046 aa24.01■■□□□ 1.43
VEGFA-217ENST00000518538 EIF3DO15371 548 aaKnown RBP eCLIP24.01■■□□□ 1.43
VEGFA-217ENST00000518538 KLRC4O43908 158 aa24.01■■□□□ 1.43
VEGFA-217ENST00000518538 PRPF6O94906 941 aaKnown RBP24.01■■□□□ 1.43
VEGFA-217ENST00000518538 CLTAP09496 248 aa24.01■■□□□ 1.43
VEGFA-217ENST00000518538 FMR1NBQ8N0W7 255 aaPredicted RBP24.01■■□□□ 1.43
VEGFA-217ENST00000518538 TMEM87AQ8NBN3 555 aa24.01■■□□□ 1.43
VEGFA-217ENST00000518538 GLIS3Q8NEA6 775 aa24.01■■□□□ 1.43
VEGFA-217ENST00000518538 MSTO1Q9BUK6 570 aa24.01■■□□□ 1.43
VEGFA-217ENST00000518538 NSUN3Q9H649 340 aaKnown RBP24.01■■□□□ 1.43
VEGFA-217ENST00000518538 TMEM206Q9H813 350 aa24.01■■□□□ 1.43
VEGFA-217ENST00000518538 TLR9Q9NR96 1032 aa24.01■■□□□ 1.43
VEGFA-217ENST00000518538 TISP43B9A030 160 aa24■■□□□ 1.43
VEGFA-217ENST00000518538 FAM189A1O60320 539 aa24■■□□□ 1.43
VEGFA-217ENST00000518538 NR1I2O75469 434 aa24■■□□□ 1.43
VEGFA-217ENST00000518538 OR1G1P47890 313 aa24■■□□□ 1.43
VEGFA-217ENST00000518538 FAM160A1Q05DH4 1040 aa24■■□□□ 1.43
VEGFA-217ENST00000518538 TUSC3Q13454 348 aa24■■□□□ 1.43
VEGFA-217ENST00000518538 POSTNQ15063 836 aa24■■□□□ 1.43
VEGFA-217ENST00000518538 SEZ6Q53EL9 994 aa24■■□□□ 1.43
VEGFA-217ENST00000518538 EPM2AIP1Q7L775 607 aaPredicted RBP24■■□□□ 1.43
VEGFA-217ENST00000518538 SYCP3Q8IZU3 236 aa24■■□□□ 1.43
VEGFA-217ENST00000518538 BCL7CQ8WUZ0 217 aaPredicted RBP24■■□□□ 1.43
VEGFA-217ENST00000518538 CCDC34Q96HJ3 373 aa24■■□□□ 1.43
VEGFA-217ENST00000518538 PPP1R10Q96QC0 940 aaKnown RBP24■■□□□ 1.43
VEGFA-217ENST00000518538 IKZF4Q9H2S9 585 aa24■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms