RNA–Protein interactions for RNA: ENST00000518407.1

IGHV3-6-201, Transcript of immunoglobulin heavy variable 3-6 (pseudogene), humanhuman

BASIC

Gene IGHV3-6, Length 347 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-6-201ENST00000518407 APOL6Q9BWW8 343 aa13.72□□□□□ -0.21
IGHV3-6-201ENST00000518407 GTPBP4Q9BZE4 634 aaKnown RBP13.72□□□□□ -0.21
IGHV3-6-201ENST00000518407 TMEM117Q9H0C3 514 aa13.72□□□□□ -0.21
IGHV3-6-201ENST00000518407 CXCL16Q9H2A7 254 aa13.72□□□□□ -0.21
IGHV3-6-201ENST00000518407 AGPAT3Q9NRZ7 376 aa13.72□□□□□ -0.21
IGHV3-6-201ENST00000518407 TYW1Q9NV66 732 aaKnown RBP13.72□□□□□ -0.21
IGHV3-6-201ENST00000518407 MAPK8IP1Q9UQF2 711 aa13.72□□□□□ -0.21
IGHV3-6-201ENST00000518407 GIT1Q9Y2X7 761 aa13.72□□□□□ -0.21
IGHV3-6-201ENST00000518407 SCN1AP35498 2009 aa13.72□□□□□ -0.21
IGHV3-6-201ENST00000518407 MYO9BQ13459 2157 aa13.72□□□□□ -0.21
IGHV3-6-201ENST00000518407 TSC2P49815 1807 aa13.71□□□□□ -0.21
IGHV3-6-201ENST00000518407 ARL5CA6NH57 179 aa13.71□□□□□ -0.21
IGHV3-6-201ENST00000518407 TBKBP1A7MCY6 615 aa13.71□□□□□ -0.21
IGHV3-6-201ENST00000518407 BIN1O00499 593 aa13.71□□□□□ -0.21
IGHV3-6-201ENST00000518407 MLH1P40692 756 aa13.71□□□□□ -0.21
IGHV3-6-201ENST00000518407 RAB30Q15771 203 aa13.71□□□□□ -0.21
IGHV3-6-201ENST00000518407 NFIL3Q16649 462 aa13.71□□□□□ -0.21
IGHV3-6-201ENST00000518407 KLHL40Q2TBA0 621 aa13.71□□□□□ -0.21
IGHV3-6-201ENST00000518407 XKR4Q5GH76 650 aa13.71□□□□□ -0.21
IGHV3-6-201ENST00000518407 CCDC183Q5T5S1 534 aa13.71□□□□□ -0.21
IGHV3-6-201ENST00000518407 ISM2Q6H9L7 571 aa13.71□□□□□ -0.21
IGHV3-6-201ENST00000518407 ARMCX5Q6P1M9 558 aa13.71□□□□□ -0.21
IGHV3-6-201ENST00000518407 ALKAL1Q6UXT8 129 aa13.71□□□□□ -0.21
IGHV3-6-201ENST00000518407 LRRC55Q6ZSA7 311 aa13.71□□□□□ -0.21
IGHV3-6-201ENST00000518407 THNSL1Q8IYQ7 743 aa13.71□□□□□ -0.21
IGHV3-6-201ENST00000518407 HACE1Q8IYU2 909 aa13.71□□□□□ -0.21
IGHV3-6-201ENST00000518407 ADSSL1Q8N142 457 aa13.71□□□□□ -0.21
IGHV3-6-201ENST00000518407 TMEM174Q8WUU8 243 aa13.71□□□□□ -0.21
IGHV3-6-201ENST00000518407 RSPH1Q8WYR4 309 aa13.71□□□□□ -0.21
IGHV3-6-201ENST00000518407 POMGNT1Q8WZA1 660 aa13.71□□□□□ -0.21
IGHV3-6-201ENST00000518407 SNX27Q96L92 541 aa13.71□□□□□ -0.21
IGHV3-6-201ENST00000518407 ZFP42Q96MM3 310 aa13.71□□□□□ -0.21
IGHV3-6-201ENST00000518407 YME1L1Q96TA2 773 aa13.71□□□□□ -0.21
IGHV3-6-201ENST00000518407 TCHPQ9BT92 498 aa13.71□□□□□ -0.21
IGHV3-6-201ENST00000518407 ZBED2Q9BTP6 218 aa13.71□□□□□ -0.21
IGHV3-6-201ENST00000518407 SEMA6BQ9H3T3 888 aa13.71□□□□□ -0.21
IGHV3-6-201ENST00000518407 UBN1Q9NPG3 1134 aa13.71□□□□□ -0.21
IGHV3-6-201ENST00000518407 MIOSQ9NXC5 875 aa13.71□□□□□ -0.21
IGHV3-6-201ENST00000518407 CGNQ9P2M7 1197 aaKnown RBP13.71□□□□□ -0.21
IGHV3-6-201ENST00000518407 HCSTQ9UBK5 93 aa13.71□□□□□ -0.21
IGHV3-6-201ENST00000518407 CPSF3Q9UKF6 684 aaKnown RBP13.71□□□□□ -0.21
IGHV3-6-201ENST00000518407 AGO2Q9UKV8 859 aaKnown RBP13.71□□□□□ -0.21
IGHV3-6-201ENST00000518407 TRAF3IP3Q9Y228 551 aa13.71□□□□□ -0.21
IGHV3-6-201ENST00000518407 PPP1R3GB7ZBB8 358 aa13.7□□□□□ -0.22
IGHV3-6-201ENST00000518407 PDXKO00764 312 aa13.7□□□□□ -0.22
IGHV3-6-201ENST00000518407 PTGESO14684 152 aa13.7□□□□□ -0.22
IGHV3-6-201ENST00000518407 B4GALT3O60512 393 aa13.7□□□□□ -0.22
IGHV3-6-201ENST00000518407 KIF20AO95235 890 aa13.7□□□□□ -0.22
IGHV3-6-201ENST00000518407 CA3P07451 260 aa13.7□□□□□ -0.22
IGHV3-6-201ENST00000518407 ADRB2P07550 413 aa13.7□□□□□ -0.22
IGHV3-6-201ENST00000518407 CXCL8P10145 99 aa13.7□□□□□ -0.22
IGHV3-6-201ENST00000518407 DNAJB2P25686 324 aa13.7□□□□□ -0.22
IGHV3-6-201ENST00000518407 MATR3P43243 847 aaKnown RBP eCLIP13.7□□□□□ -0.22
IGHV3-6-201ENST00000518407 OSTNP61366 133 aa13.7□□□□□ -0.22
IGHV3-6-201ENST00000518407 ENOX2Q16206 610 aaKnown RBP13.7□□□□□ -0.22
IGHV3-6-201ENST00000518407 KYAT1Q16773 422 aa13.7□□□□□ -0.22
IGHV3-6-201ENST00000518407 SLC10A6Q3KNW5 377 aa13.7□□□□□ -0.22
IGHV3-6-201ENST00000518407 PAN2Q504Q3 1202 aaKnown RBP13.7□□□□□ -0.22
IGHV3-6-201ENST00000518407 HABP4Q5JVS0 413 aaKnown RBP13.7□□□□□ -0.22
IGHV3-6-201ENST00000518407 GLB1LQ6UWU2 654 aa13.7□□□□□ -0.22
IGHV3-6-201ENST00000518407 FBXL18Q96ME1 805 aa13.7□□□□□ -0.22
IGHV3-6-201ENST00000518407 GAD1Q99259 594 aa13.7□□□□□ -0.22
IGHV3-6-201ENST00000518407 CCDC94Q9BW85 323 aaPredicted RBP13.7□□□□□ -0.22
IGHV3-6-201ENST00000518407 NKX2-4Q9H2Z4 354 aa13.7□□□□□ -0.22
IGHV3-6-201ENST00000518407 CWH43Q9H720 699 aa13.7□□□□□ -0.22
IGHV3-6-201ENST00000518407 TBC1D13Q9NVG8 400 aa13.7□□□□□ -0.22
IGHV3-6-201ENST00000518407 DMAC2Q9NW81 257 aa13.7□□□□□ -0.22
IGHV3-6-201ENST00000518407 HSPBP1Q9NZL4 362 aa13.7□□□□□ -0.22
IGHV3-6-201ENST00000518407 KLK14Q9P0G3 267 aa13.7□□□□□ -0.22
IGHV3-6-201ENST00000518407 PARP2Q9UGN5 583 aa13.7□□□□□ -0.22
IGHV3-6-201ENST00000518407 PLAGL2Q9UPG8 496 aa13.7□□□□□ -0.22
IGHV3-6-201ENST00000518407 MRPL42Q9Y6G3 142 aaKnown RBP13.7□□□□□ -0.22
IGHV3-6-201ENST00000518407 SZT2Q5T011 3432 aa13.7□□□□□ -0.22
IGHV3-6-201ENST00000518407 TTC26A0AVF1 554 aa13.69□□□□□ -0.22
IGHV3-6-201ENST00000518407 LINC01553A4QN01 128 aa13.69□□□□□ -0.22
IGHV3-6-201ENST00000518407 KIAA0391O15091 583 aaKnown RBP13.69□□□□□ -0.22
IGHV3-6-201ENST00000518407 CLIC2O15247 247 aa13.69□□□□□ -0.22
IGHV3-6-201ENST00000518407 CLTAP09496 248 aa13.69□□□□□ -0.22
IGHV3-6-201ENST00000518407 ACOT2P49753 483 aa13.69□□□□□ -0.22
IGHV3-6-201ENST00000518407 SCNN1GP51170 649 aa13.69□□□□□ -0.22
IGHV3-6-201ENST00000518407 PMS1P54277 932 aaKnown RBP13.69□□□□□ -0.22
IGHV3-6-201ENST00000518407 POU5F1Q01860 360 aaKnown RBP13.69□□□□□ -0.22
IGHV3-6-201ENST00000518407 TAP1Q03518 808 aa13.69□□□□□ -0.22
IGHV3-6-201ENST00000518407 BTG3Q14201 252 aaPredicted RBP13.69□□□□□ -0.22
IGHV3-6-201ENST00000518407 NFKBIBQ15653 356 aa13.69□□□□□ -0.22
IGHV3-6-201ENST00000518407 NAB2Q15742 525 aa13.69□□□□□ -0.22
IGHV3-6-201ENST00000518407 NOMO2Q5JPE7 1267 aa13.69□□□□□ -0.22
IGHV3-6-201ENST00000518407 CENPPQ6IPU0 288 aa13.69□□□□□ -0.22
IGHV3-6-201ENST00000518407 HS2ST1Q7LGA3 356 aa13.69□□□□□ -0.22
IGHV3-6-201ENST00000518407 SPRED2Q7Z698 418 aa13.69□□□□□ -0.22
IGHV3-6-201ENST00000518407 SLC9A9Q8IVB4 645 aa13.69□□□□□ -0.22
IGHV3-6-201ENST00000518407 ZC3H3Q8IXZ2 948 aaKnown RBP13.69□□□□□ -0.22
IGHV3-6-201ENST00000518407 LRRC43Q8N309 656 aa13.69□□□□□ -0.22
IGHV3-6-201ENST00000518407 GOLGA5Q8TBA6 731 aa13.69□□□□□ -0.22
IGHV3-6-201ENST00000518407 CLP1Q92989 425 aaKnown RBP13.69□□□□□ -0.22
IGHV3-6-201ENST00000518407 SAAL1Q96ER3 474 aa13.69□□□□□ -0.22
IGHV3-6-201ENST00000518407 ACAP3Q96P50 834 aa13.69□□□□□ -0.22
IGHV3-6-201ENST00000518407 MRPL9Q9BYD2 267 aaKnown RBP13.69□□□□□ -0.22
IGHV3-6-201ENST00000518407 PCIF1Q9H4Z3 704 aa13.69□□□□□ -0.22
IGHV3-6-201ENST00000518407 CNTN3Q9P232 1028 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms