RNA–Protein interactions for RNA: ENST00000518359.5

TMEM55A-202, humanhuman

TSL 3

Gene TMEM55A, Length 867 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55A-202ENST00000518359 EDIL3O43854 480 aa13.02□□□□□ -0.33
TMEM55A-202ENST00000518359 TSPAN1O60635 241 aa13.02□□□□□ -0.33
TMEM55A-202ENST00000518359 CD72P21854 359 aa13.02□□□□□ -0.33
TMEM55A-202ENST00000518359 TARSP26639 723 aaKnown RBP13.02□□□□□ -0.33
TMEM55A-202ENST00000518359 NTHL1P78549 312 aa13.02□□□□□ -0.33
TMEM55A-202ENST00000518359 ADCY1Q08828 1119 aa13.02□□□□□ -0.33
TMEM55A-202ENST00000518359 TFDP1Q14186 410 aa13.02□□□□□ -0.33
TMEM55A-202ENST00000518359 HSP90AA2PQ14568 343 aaPredicted RBP13.02□□□□□ -0.33
TMEM55A-202ENST00000518359 MXD4Q14582 209 aaPredicted RBP13.02□□□□□ -0.33
TMEM55A-202ENST00000518359 EMC2Q15006 297 aa13.02□□□□□ -0.33
TMEM55A-202ENST00000518359 PSMD5Q16401 504 aa13.02□□□□□ -0.33
TMEM55A-202ENST00000518359 ADCK5Q3MIX3 580 aa13.02□□□□□ -0.33
TMEM55A-202ENST00000518359 PDXDC1Q6P996 788 aa13.02□□□□□ -0.33
TMEM55A-202ENST00000518359 PRSS55Q6UWB4 352 aaPredicted RBP13.02□□□□□ -0.33
TMEM55A-202ENST00000518359 OTUD6AQ7L8S5 288 aa13.02□□□□□ -0.33
TMEM55A-202ENST00000518359 ETNPPLQ8TBG4 499 aa13.02□□□□□ -0.33
TMEM55A-202ENST00000518359 NETO1Q8TDF5 533 aa13.02□□□□□ -0.33
TMEM55A-202ENST00000518359 KXD1Q9BQD3 176 aa13.02□□□□□ -0.33
TMEM55A-202ENST00000518359 SLC26A6Q9BXS9 759 aa13.02□□□□□ -0.33
TMEM55A-202ENST00000518359 SLKQ9H2G2 1235 aaPredicted RBP13.02□□□□□ -0.33
TMEM55A-202ENST00000518359 RNF39Q9H2S5 420 aa13.02□□□□□ -0.33
TMEM55A-202ENST00000518359 BMP2KQ9NSY1 1161 aaPredicted RBP13.02□□□□□ -0.33
TMEM55A-202ENST00000518359 KCNH3Q9ULD8 1083 aa13.02□□□□□ -0.33
TMEM55A-202ENST00000518359 NOTCH4Q99466 2003 aa13.01□□□□□ -0.33
TMEM55A-202ENST00000518359 CCL16O15467 120 aa13.01□□□□□ -0.33
TMEM55A-202ENST00000518359 LRP3O75074 770 aa13.01□□□□□ -0.33
TMEM55A-202ENST00000518359 P4HBP07237 508 aaKnown RBP13.01□□□□□ -0.33
TMEM55A-202ENST00000518359 POU2F2P09086 479 aa13.01□□□□□ -0.33
TMEM55A-202ENST00000518359 PTENP60484 403 aa13.01□□□□□ -0.33
TMEM55A-202ENST00000518359 PABPC1LQ4VXU2 614 aaKnown RBP13.01□□□□□ -0.33
TMEM55A-202ENST00000518359 PPM1JQ5JR12 505 aa13.01□□□□□ -0.33
TMEM55A-202ENST00000518359 RTP2Q5QGT7 225 aa13.01□□□□□ -0.33
TMEM55A-202ENST00000518359 LAIR1Q6GTX8 287 aa13.01□□□□□ -0.33
TMEM55A-202ENST00000518359 TSSK4Q6SA08 328 aa13.01□□□□□ -0.33
TMEM55A-202ENST00000518359 PIK3R5Q8WYR1 880 aa13.01□□□□□ -0.33
TMEM55A-202ENST00000518359 BRF1Q92994 677 aa13.01□□□□□ -0.33
TMEM55A-202ENST00000518359 CPB2Q96IY4 423 aa13.01□□□□□ -0.33
TMEM55A-202ENST00000518359 MTRQ99707 1265 aa13.01□□□□□ -0.33
TMEM55A-202ENST00000518359 IER2Q9BTL4 223 aa13.01□□□□□ -0.33
TMEM55A-202ENST00000518359 TTPALQ9BTX7 342 aa13.01□□□□□ -0.33
TMEM55A-202ENST00000518359 NXF3Q9H4D5 531 aaKnown RBP13.01□□□□□ -0.33
TMEM55A-202ENST00000518359 DDX25Q9UHL0 483 aaKnown RBP13.01□□□□□ -0.33
TMEM55A-202ENST00000518359 PCDHA4Q9UN74 947 aa13.01□□□□□ -0.33
TMEM55A-202ENST00000518359 VWA8A3KMH1 1905 aa13.01□□□□□ -0.33
TMEM55A-202ENST00000518359 SLC30A4O14863 429 aa13□□□□□ -0.33
TMEM55A-202ENST00000518359 ECI2O75521 394 aa13□□□□□ -0.33
TMEM55A-202ENST00000518359 IFNAR1P17181 557 aa13□□□□□ -0.33
TMEM55A-202ENST00000518359 TGM1P22735 817 aa13□□□□□ -0.33
TMEM55A-202ENST00000518359 YWHABP31946 246 aaKnown RBP13□□□□□ -0.33
TMEM55A-202ENST00000518359 POU5F1BQ06416 359 aa13□□□□□ -0.33
TMEM55A-202ENST00000518359 SPEM2Q0P670 501 aa13□□□□□ -0.33
TMEM55A-202ENST00000518359 ELAVL2Q12926 359 aaKnown RBP13□□□□□ -0.33
TMEM55A-202ENST00000518359 MTAPQ13126 283 aa13□□□□□ -0.33
TMEM55A-202ENST00000518359 PPP2R5CQ13362 524 aa13□□□□□ -0.33
TMEM55A-202ENST00000518359 TUSC3Q13454 348 aa13□□□□□ -0.33
TMEM55A-202ENST00000518359 UVSSAQ2YD98 709 aa13□□□□□ -0.33
TMEM55A-202ENST00000518359 XKR9Q5GH70 373 aa13□□□□□ -0.33
TMEM55A-202ENST00000518359 FAM171A1Q5VUB5 890 aa13□□□□□ -0.33
TMEM55A-202ENST00000518359 SLC27A1Q6PCB7 646 aa13□□□□□ -0.33
TMEM55A-202ENST00000518359 Q6ZUG5 572 aa13□□□□□ -0.33
TMEM55A-202ENST00000518359 RTL10Q7L3V2 364 aa13□□□□□ -0.33
TMEM55A-202ENST00000518359 CEP57Q86XR8 500 aa13□□□□□ -0.33
TMEM55A-202ENST00000518359 NPAS3Q8IXF0 933 aa13□□□□□ -0.33
TMEM55A-202ENST00000518359 C4orf19Q8IY42 314 aa13□□□□□ -0.33
TMEM55A-202ENST00000518359 TRIM22Q8IYM9 498 aa13□□□□□ -0.33
TMEM55A-202ENST00000518359 CELF5Q8N6W0 485 aaKnown RBP13□□□□□ -0.33
TMEM55A-202ENST00000518359 ZNF579Q8NAF0 562 aaKnown RBP13□□□□□ -0.33
TMEM55A-202ENST00000518359 ITFG1Q8TB96 612 aa13□□□□□ -0.33
TMEM55A-202ENST00000518359 SLC7A14Q8TBB6 771 aa13□□□□□ -0.33
TMEM55A-202ENST00000518359 DNASE1L2Q92874 299 aa13□□□□□ -0.33
TMEM55A-202ENST00000518359 FAM20AQ96MK3 541 aa13□□□□□ -0.33
TMEM55A-202ENST00000518359 CLSTN3Q9BQT9 956 aa13□□□□□ -0.33
TMEM55A-202ENST00000518359 PARD6AQ9NPB6 346 aa13□□□□□ -0.33
TMEM55A-202ENST00000518359 PARP2Q9UGN5 583 aa13□□□□□ -0.33
TMEM55A-202ENST00000518359 EML1O00423 815 aa12.99□□□□□ -0.33
TMEM55A-202ENST00000518359 MAN2B1O00754 1011 aa12.99□□□□□ -0.33
TMEM55A-202ENST00000518359 FOXD2O60548 495 aaPredicted RBP12.99□□□□□ -0.33
TMEM55A-202ENST00000518359 ARF4P18085 180 aaPredicted RBP12.99□□□□□ -0.33
TMEM55A-202ENST00000518359 AKAP5P24588 427 aa12.99□□□□□ -0.33
TMEM55A-202ENST00000518359 AXDND1Q5T1B0 1012 aaPredicted RBP12.99□□□□□ -0.33
TMEM55A-202ENST00000518359 IFNLR1Q8IU57 520 aaPredicted RBP12.99□□□□□ -0.33
TMEM55A-202ENST00000518359 RASEFQ8IZ41 740 aa12.99□□□□□ -0.33
TMEM55A-202ENST00000518359 GSTCDQ8NEC7 633 aa12.99□□□□□ -0.33
TMEM55A-202ENST00000518359 LNX1Q8TBB1 728 aaPredicted RBP12.99□□□□□ -0.33
TMEM55A-202ENST00000518359 DDX1Q92499 740 aaKnown RBP12.99□□□□□ -0.33
TMEM55A-202ENST00000518359 RABGGTAQ92696 567 aa12.99□□□□□ -0.33
TMEM55A-202ENST00000518359 LXNQ9BS40 222 aa12.99□□□□□ -0.33
TMEM55A-202ENST00000518359 HEBP1Q9NRV9 189 aa12.99□□□□□ -0.33
TMEM55A-202ENST00000518359 GDE1Q9NZC3 331 aa12.99□□□□□ -0.33
TMEM55A-202ENST00000518359 VAV3Q9UKW4 847 aa12.99□□□□□ -0.33
TMEM55A-202ENST00000518359 MRPS23Q9Y3D9 190 aaKnown RBP12.99□□□□□ -0.33
TMEM55A-202ENST00000518359 TICRRQ7Z2Z1 1910 aa12.99□□□□□ -0.33
TMEM55A-202ENST00000518359 PDCD11Q14690 1871 aaKnown RBP12.98□□□□□ -0.33
TMEM55A-202ENST00000518359 LOC105378220A0A1B0GUY1 285 aaPredicted RBP12.98□□□□□ -0.33
TMEM55A-202ENST00000518359 NPTXRO95502 500 aa12.98□□□□□ -0.33
TMEM55A-202ENST00000518359 RETP07949 1114 aa12.98□□□□□ -0.33
TMEM55A-202ENST00000518359 CCR3P51677 355 aa12.98□□□□□ -0.33
TMEM55A-202ENST00000518359 MBTD1Q05BQ5 628 aa12.98□□□□□ -0.33
TMEM55A-202ENST00000518359 DMWDQ09019 674 aa12.98□□□□□ -0.33
TMEM55A-202ENST00000518359 NTRK3Q16288 839 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms