RNA–Protein interactions for RNA: ENST00000517713.5

COL13A1-210, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,007 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-210ENST00000517713 ZC3H11AO75152 810 aaKnown RBP eCLIP28.64■■■□□ 2.17
COL13A1-210ENST00000517713 ERLIN1O75477 346 aa28.64■■■□□ 2.17
COL13A1-210ENST00000517713 CFAP221Q4G0U5 840 aa28.64■■■□□ 2.17
COL13A1-210ENST00000517713 TAPT1Q6NXT6 567 aa28.64■■■□□ 2.17
COL13A1-210ENST00000517713 MMGT1Q8N4V1 131 aa28.64■■■□□ 2.17
COL13A1-210ENST00000517713 TATDN2Q93075 761 aa28.64■■■□□ 2.17
COL13A1-210ENST00000517713 PDE11AQ9HCR9 933 aa28.64■■■□□ 2.17
COL13A1-210ENST00000517713 IVNS1ABPQ9Y6Y0 642 aa28.64■■■□□ 2.17
COL13A1-210ENST00000517713 PLXNA1Q9UIW2 1896 aa28.63■■■□□ 2.17
COL13A1-210ENST00000517713 ADGRA2Q96PE1 1338 aa28.63■■■□□ 2.17
COL13A1-210ENST00000517713 CYP26A1O43174 497 aa28.63■■■□□ 2.17
COL13A1-210ENST00000517713 SRGAP2CP0DJJ0 459 aa28.63■■■□□ 2.17
COL13A1-210ENST00000517713 DNA2P51530 1060 aa28.63■■■□□ 2.17
COL13A1-210ENST00000517713 WNT7BP56706 349 aa28.63■■■□□ 2.17
COL13A1-210ENST00000517713 RPS6KA1Q15418 735 aa28.63■■■□□ 2.17
COL13A1-210ENST00000517713 CDCA2Q69YH5 1023 aaPredicted RBP28.63■■■□□ 2.17
COL13A1-210ENST00000517713 ZPBP2Q6X784 338 aa28.63■■■□□ 2.17
COL13A1-210ENST00000517713 C2orf69Q8N8R5 385 aa28.63■■■□□ 2.17
COL13A1-210ENST00000517713 RFFLQ8WZ73 363 aa28.63■■■□□ 2.17
COL13A1-210ENST00000517713 CCDC113Q9H0I3 377 aa28.63■■■□□ 2.17
COL13A1-210ENST00000517713 EHD2Q9NZN4 543 aa28.63■■■□□ 2.17
COL13A1-210ENST00000517713 TARSL2A2RTX5 802 aaKnown RBP28.62■■■□□ 2.17
COL13A1-210ENST00000517713 ANKRD62A6NC57 917 aa28.62■■■□□ 2.17
COL13A1-210ENST00000517713 HBP1O60381 514 aa28.62■■■□□ 2.17
COL13A1-210ENST00000517713 ABCB4P21439 1286 aa28.62■■■□□ 2.17
COL13A1-210ENST00000517713 ARHGAP1Q07960 439 aa28.62■■■□□ 2.17
COL13A1-210ENST00000517713 LAMC2Q13753 1193 aa28.62■■■□□ 2.17
COL13A1-210ENST00000517713 LMBRD2Q68DH5 695 aaPredicted RBP28.62■■■□□ 2.17
COL13A1-210ENST00000517713 SLFN11Q7Z7L1 901 aa28.62■■■□□ 2.17
COL13A1-210ENST00000517713 SLC35G2Q8TBE7 412 aa28.62■■■□□ 2.17
COL13A1-210ENST00000517713 EPS8L1Q8TE68 723 aa28.62■■■□□ 2.17
COL13A1-210ENST00000517713 TAF4BQ92750 862 aa28.62■■■□□ 2.17
COL13A1-210ENST00000517713 MS4A14Q96JA4 679 aa28.62■■■□□ 2.17
COL13A1-210ENST00000517713 VTA1Q9NP79 307 aa28.62■■■□□ 2.17
COL13A1-210ENST00000517713 SMARCAL1Q9NZC9 954 aa28.62■■■□□ 2.17
COL13A1-210ENST00000517713 NOCTQ9UK39 431 aaKnown RBP28.62■■■□□ 2.17
COL13A1-210ENST00000517713 C4BPAP04003 597 aaKnown RBP28.62■■■□□ 2.17
COL13A1-210ENST00000517713 LONRF2Q1L5Z9 754 aa28.62■■■□□ 2.17
COL13A1-210ENST00000517713 ZACNQ401N2 412 aa28.62■■■□□ 2.17
COL13A1-210ENST00000517713 ZBTB41Q5SVQ8 909 aa28.62■■■□□ 2.17
COL13A1-210ENST00000517713 NOP9Q86U38 636 aaKnown RBP28.62■■■□□ 2.17
COL13A1-210ENST00000517713 ZBTB8OSQ8IWT0 167 aa28.62■■■□□ 2.17
COL13A1-210ENST00000517713 SYCE1Q8N0S2 351 aa28.62■■■□□ 2.17
COL13A1-210ENST00000517713 RNF149Q8NC42 400 aa28.62■■■□□ 2.17
COL13A1-210ENST00000517713 FAM84AQ96KN4 292 aa28.62■■■□□ 2.17
COL13A1-210ENST00000517713 PI4K2AQ9BTU6 479 aa28.62■■■□□ 2.17
COL13A1-210ENST00000517713 MRPL4Q9BYD3 311 aaKnown RBP28.62■■■□□ 2.17
COL13A1-210ENST00000517713 SUCLA2Q9P2R7 463 aaPredicted RBP28.62■■■□□ 2.17
COL13A1-210ENST00000517713 MSCO60682 206 aa28.61■■■□□ 2.17
COL13A1-210ENST00000517713 KIF4AO95239 1232 aa28.61■■■□□ 2.17
COL13A1-210ENST00000517713 TBC1D8O95759 1140 aa28.61■■■□□ 2.17
COL13A1-210ENST00000517713 ENOSF1Q7L5Y1 443 aa28.61■■■□□ 2.17
COL13A1-210ENST00000517713 TRAPPC12Q8WVT3 735 aa28.61■■■□□ 2.17
COL13A1-210ENST00000517713 FAM81BQ96LP2 452 aa28.61■■■□□ 2.17
COL13A1-210ENST00000517713 GOLPH3Q9H4A6 298 aa28.61■■■□□ 2.17
COL13A1-210ENST00000517713 CLDN3O15551 220 aa28.6■■■□□ 2.17
COL13A1-210ENST00000517713 CHRNB2P17787 502 aa28.6■■■□□ 2.17
COL13A1-210ENST00000517713 GCNT1Q02742 428 aa28.6■■■□□ 2.17
COL13A1-210ENST00000517713 SPRYD7Q5W111 196 aa28.6■■■□□ 2.17
COL13A1-210ENST00000517713 SLC47A2Q86VL8 602 aa28.6■■■□□ 2.17
COL13A1-210ENST00000517713 ELMO3Q96BJ8 720 aa28.6■■■□□ 2.17
COL13A1-210ENST00000517713 THAP2Q9H0W7 228 aa28.6■■■□□ 2.17
COL13A1-210ENST00000517713 ISCUQ9H1K1 167 aa28.6■■■□□ 2.17
COL13A1-210ENST00000517713 C2orf40Q9H1Z8 148 aa28.6■■■□□ 2.17
COL13A1-210ENST00000517713 ERAP1Q9NZ08 941 aa28.6■■■□□ 2.17
COL13A1-210ENST00000517713 TTLL13PA6NNM8 815 aa28.6■■■□□ 2.17
COL13A1-210ENST00000517713 CELF2O95319 508 aaKnown RBP28.6■■■□□ 2.17
COL13A1-210ENST00000517713 MCM3P25205 808 aa28.6■■■□□ 2.17
COL13A1-210ENST00000517713 TDRD10Q5VZ19 366 aaKnown RBP28.6■■■□□ 2.17
COL13A1-210ENST00000517713 CCDC70Q6NSX1 233 aa28.6■■■□□ 2.17
COL13A1-210ENST00000517713 ZNF467Q7Z7K2 595 aaPredicted RBP28.6■■■□□ 2.17
COL13A1-210ENST00000517713 KRT222Q8N1A0 295 aa28.6■■■□□ 2.17
COL13A1-210ENST00000517713 ABCB6Q9NP58 842 aa28.6■■■□□ 2.17
COL13A1-210ENST00000517713 OSGEPQ9NPF4 335 aa28.6■■■□□ 2.17
COL13A1-210ENST00000517713 C1orf112Q9NSG2 853 aa28.6■■■□□ 2.17
COL13A1-210ENST00000517713 CES2O00748 559 aa28.59■■■□□ 2.17
COL13A1-210ENST00000517713 GH1P01241 217 aa28.59■■■□□ 2.17
COL13A1-210ENST00000517713 FTLP02792 175 aaPredicted RBP28.59■■■□□ 2.17
COL13A1-210ENST00000517713 WDR44Q5JSH3 913 aa28.59■■■□□ 2.17
COL13A1-210ENST00000517713 BEND6Q5SZJ8 279 aaPredicted RBP28.59■■■□□ 2.17
COL13A1-210ENST00000517713 GJC2Q5T442 439 aaPredicted RBP28.59■■■□□ 2.17
COL13A1-210ENST00000517713 TAF3Q5VWG9 929 aa28.59■■■□□ 2.17
COL13A1-210ENST00000517713 PEX26Q7Z412 305 aa28.59■■■□□ 2.17
COL13A1-210ENST00000517713 DAAM2Q86T65 1068 aa28.59■■■□□ 2.17
COL13A1-210ENST00000517713 RHPN2Q8IUC4 686 aa28.59■■■□□ 2.17
COL13A1-210ENST00000517713 ARHGEF26Q96DR7 871 aa28.59■■■□□ 2.17
COL13A1-210ENST00000517713 RRAGCQ9HB90 399 aa28.59■■■□□ 2.17
COL13A1-210ENST00000517713 PTPRJQ12913 1337 aa28.59■■■□□ 2.17
COL13A1-210ENST00000517713 RBM47A0AV96 593 aaKnown RBP28.59■■■□□ 2.17
COL13A1-210ENST00000517713 TOM1L1O75674 476 aa28.59■■■□□ 2.17
COL13A1-210ENST00000517713 HLA-DRAP01903 254 aa28.59■■■□□ 2.17
COL13A1-210ENST00000517713 PRKCBP05771 671 aa28.59■■■□□ 2.17
COL13A1-210ENST00000517713 HARSP12081 509 aaKnown RBP28.59■■■□□ 2.17
COL13A1-210ENST00000517713 BIRC3Q13489 604 aa28.59■■■□□ 2.17
COL13A1-210ENST00000517713 MAPK6Q16659 721 aa28.59■■■□□ 2.17
COL13A1-210ENST00000517713 MAMDC4Q6UXC1 1216 aa28.59■■■□□ 2.17
COL13A1-210ENST00000517713 PCDHB18PQ96TA0 734 aa28.59■■■□□ 2.17
COL13A1-210ENST00000517713 CGRRF1Q99675 332 aa28.59■■■□□ 2.17
COL13A1-210ENST00000517713 ACO2Q99798 780 aaKnown RBP28.59■■■□□ 2.17
COL13A1-210ENST00000517713 RNPEPQ9H4A4 650 aa28.59■■■□□ 2.17
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms