RNA–Protein interactions for RNA: ENST00000516989.1

SCARNA6.1-201, small Cajal body-specific RNA 6, humanhuman

BASIC

Gene SCARNA6, Length 238 nt, Biotype scaRNA, Subcellular localisation Cytosol, Nucleolus, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA6.1-201ENST00000516989 NOP9Q86U38 636 aaKnown RBP6.44□□□□□ -1.38
SCARNA6.1-201ENST00000516989 SERINC5Q86VE9 423 aa6.44□□□□□ -1.38
SCARNA6.1-201ENST00000516989 EXOC8Q8IYI6 725 aa6.44□□□□□ -1.38
SCARNA6.1-201ENST00000516989 NME8Q8N427 588 aa6.44□□□□□ -1.38
SCARNA6.1-201ENST00000516989 TMEM199Q8N511 208 aa6.44□□□□□ -1.38
SCARNA6.1-201ENST00000516989 CAGE1Q8TC20 777 aa6.44□□□□□ -1.38
SCARNA6.1-201ENST00000516989 KCNG4Q8TDN1 519 aa6.44□□□□□ -1.38
SCARNA6.1-201ENST00000516989 LEO1Q8WVC0 666 aaPredicted RBP6.44□□□□□ -1.38
SCARNA6.1-201ENST00000516989 SLC7A3Q8WY07 619 aa6.44□□□□□ -1.38
SCARNA6.1-201ENST00000516989 BADQ92934 168 aa6.44□□□□□ -1.38
SCARNA6.1-201ENST00000516989 WNT8BQ93098 351 aa6.44□□□□□ -1.38
SCARNA6.1-201ENST00000516989 SCLYQ96I15 445 aa6.44□□□□□ -1.38
SCARNA6.1-201ENST00000516989 EPSTI1Q96J88 318 aa6.44□□□□□ -1.38
SCARNA6.1-201ENST00000516989 PNMA5Q96PV4 448 aa6.44□□□□□ -1.38
SCARNA6.1-201ENST00000516989 CTAGE1Q96RT6 745 aa6.44□□□□□ -1.38
SCARNA6.1-201ENST00000516989 MAP7D2Q96T17 732 aa6.44□□□□□ -1.38
SCARNA6.1-201ENST00000516989 PPP1R16BQ96T49 567 aa6.44□□□□□ -1.38
SCARNA6.1-201ENST00000516989 JPH2Q9BR39 696 aaPredicted RBP6.44□□□□□ -1.38
SCARNA6.1-201ENST00000516989 MMTAG2Q9BU76 263 aaKnown RBP6.44□□□□□ -1.38
SCARNA6.1-201ENST00000516989 SCAND2PQ9GZW5 306 aaPredicted RBP6.44□□□□□ -1.38
SCARNA6.1-201ENST00000516989 NT5C3AQ9H0P0 336 aa6.44□□□□□ -1.38
SCARNA6.1-201ENST00000516989 BHMT2Q9H2M3 363 aa6.44□□□□□ -1.38
SCARNA6.1-201ENST00000516989 DDX19AQ9NUU7 478 aaKnown RBP6.44□□□□□ -1.38
SCARNA6.1-201ENST00000516989 ZFATQ9P243 1243 aa6.44□□□□□ -1.38
SCARNA6.1-201ENST00000516989 TBX21Q9UL17 535 aa6.44□□□□□ -1.38
SCARNA6.1-201ENST00000516989 PCDHA7Q9UN72 937 aa6.44□□□□□ -1.38
SCARNA6.1-201ENST00000516989 AKT3Q9Y243 479 aa6.44□□□□□ -1.38
SCARNA6.1-201ENST00000516989 PCDHGC4Q9Y5F7 938 aa6.44□□□□□ -1.38
SCARNA6.1-201ENST00000516989 UMODL1Q5DID0 1318 aa6.44□□□□□ -1.38
SCARNA6.1-201ENST00000516989 CENPFP49454 3210 aa6.44□□□□□ -1.38
SCARNA6.1-201ENST00000516989 COL1A2P08123 1366 aa6.44□□□□□ -1.38
SCARNA6.1-201ENST00000516989 HTTP42858 3142 aa6.43□□□□□ -1.38
SCARNA6.1-201ENST00000516989 TMEM238LA0A1B0GVL6 79 aa6.43□□□□□ -1.38
SCARNA6.1-201ENST00000516989 MBLAC1A4D2B0 266 aaPredicted RBP6.43□□□□□ -1.38
SCARNA6.1-201ENST00000516989 GOLGA6L4A6NEF3 574 aa6.43□□□□□ -1.38
SCARNA6.1-201ENST00000516989 M0QZ92 97 aa6.43□□□□□ -1.38
SCARNA6.1-201ENST00000516989 KHNYNO15037 678 aaKnown RBP6.43□□□□□ -1.38
SCARNA6.1-201ENST00000516989 EFSO43281 561 aa6.43□□□□□ -1.38
SCARNA6.1-201ENST00000516989 CUTAO60888 179 aa6.43□□□□□ -1.38
SCARNA6.1-201ENST00000516989 MAFO75444 373 aaPredicted RBP6.43□□□□□ -1.38
SCARNA6.1-201ENST00000516989 DGAT1O75907 488 aa6.43□□□□□ -1.38
SCARNA6.1-201ENST00000516989 STK10O94804 968 aaKnown RBP6.43□□□□□ -1.38
SCARNA6.1-201ENST00000516989 C22orf31O95567 290 aa6.43□□□□□ -1.38
SCARNA6.1-201ENST00000516989 EYA4O95677 639 aa6.43□□□□□ -1.38
SCARNA6.1-201ENST00000516989 IQCF3P0C7M6 154 aa6.43□□□□□ -1.38
SCARNA6.1-201ENST00000516989 PLA2G4BP0C869 781 aa6.43□□□□□ -1.38
SCARNA6.1-201ENST00000516989 FAM157BP0CG42 384 aa6.43□□□□□ -1.38
SCARNA6.1-201ENST00000516989 ACRP10323 421 aa6.43□□□□□ -1.38
SCARNA6.1-201ENST00000516989 CKBP12277 381 aa6.43□□□□□ -1.38
SCARNA6.1-201ENST00000516989 CSF2RAP15509 400 aa6.43□□□□□ -1.38
SCARNA6.1-201ENST00000516989 SELPP16109 830 aa6.43□□□□□ -1.38
SCARNA6.1-201ENST00000516989 MUTP22033 750 aa6.43□□□□□ -1.38
SCARNA6.1-201ENST00000516989 ITGB8P26012 769 aa6.43□□□□□ -1.38
SCARNA6.1-201ENST00000516989 HOXC8P31273 242 aa6.43□□□□□ -1.38
SCARNA6.1-201ENST00000516989 RARRES1P49788 294 aa6.43□□□□□ -1.38
SCARNA6.1-201ENST00000516989 LBRQ14739 615 aaKnown RBP6.43□□□□□ -1.38
SCARNA6.1-201ENST00000516989 ZNF800Q2TB10 664 aaPredicted RBP eCLIP6.43□□□□□ -1.38
SCARNA6.1-201ENST00000516989 ZNF618Q5T7W0 954 aa6.43□□□□□ -1.38
SCARNA6.1-201ENST00000516989 FAM102BQ5T8I3 360 aa6.43□□□□□ -1.38
SCARNA6.1-201ENST00000516989 RRAGBQ5VZM2 374 aa6.43□□□□□ -1.38
SCARNA6.1-201ENST00000516989 FIGNL1Q6PIW4 674 aa6.43□□□□□ -1.38
SCARNA6.1-201ENST00000516989 CCDC73Q6ZRK6 1079 aa6.43□□□□□ -1.38
SCARNA6.1-201ENST00000516989 RIPOR1Q6ZS17 1223 aa6.43□□□□□ -1.38
SCARNA6.1-201ENST00000516989 LRRC8DQ7L1W4 858 aa6.43□□□□□ -1.38
SCARNA6.1-201ENST00000516989 DEFB128Q7Z7B8 93 aa6.43□□□□□ -1.38
SCARNA6.1-201ENST00000516989 RPUSD2Q8IZ73 545 aaKnown RBP6.43□□□□□ -1.38
SCARNA6.1-201ENST00000516989 KIAA0319LQ8IZA0 1049 aa6.43□□□□□ -1.38
SCARNA6.1-201ENST00000516989 LRRC71Q8N4P6 559 aa6.43□□□□□ -1.38
SCARNA6.1-201ENST00000516989 PDILTQ8N807 584 aa6.43□□□□□ -1.38
SCARNA6.1-201ENST00000516989 TMEM143Q96AN5 459 aa6.43□□□□□ -1.38
SCARNA6.1-201ENST00000516989 ZNF668Q96K58 619 aaPredicted RBP6.43□□□□□ -1.38
SCARNA6.1-201ENST00000516989 TRIM56Q9BRZ2 755 aaKnown RBP6.43□□□□□ -1.38
SCARNA6.1-201ENST00000516989 SPON2Q9BUD6 331 aa6.43□□□□□ -1.38
SCARNA6.1-201ENST00000516989 OXCT2Q9BYC2 517 aaPredicted RBP6.43□□□□□ -1.38
SCARNA6.1-201ENST00000516989 CCSER1Q9C0I3 900 aa6.43□□□□□ -1.38
SCARNA6.1-201ENST00000516989 LIN7BQ9HAP6 207 aa6.43□□□□□ -1.38
SCARNA6.1-201ENST00000516989 POLD4Q9HCU8 107 aa6.43□□□□□ -1.38
SCARNA6.1-201ENST00000516989 SUCLA2Q9P2R7 463 aaPredicted RBP6.43□□□□□ -1.38
SCARNA6.1-201ENST00000516989 ADAMTS1Q9UHI8 967 aa6.43□□□□□ -1.38
SCARNA6.1-201ENST00000516989 PPME1Q9Y570 386 aa6.43□□□□□ -1.38
SCARNA6.1-201ENST00000516989 MORC2Q9Y6X9 1032 aaPredicted RBP6.43□□□□□ -1.38
SCARNA6.1-201ENST00000516989 SCN10AQ9Y5Y9 1956 aa6.43□□□□□ -1.38
SCARNA6.1-201ENST00000516989 KDM3AQ9Y4C1 1321 aa6.43□□□□□ -1.38
SCARNA6.1-201ENST00000516989 FRMPD3Q5JV73 1810 aa6.43□□□□□ -1.38
SCARNA6.1-201ENST00000516989 KAT6AQ92794 2004 aa6.42□□□□□ -1.38
SCARNA6.1-201ENST00000516989 IGKV6-21A0A0C4DH24 114 aa6.42□□□□□ -1.38
SCARNA6.1-201ENST00000516989 DCDC2BA2VCK2 349 aa6.42□□□□□ -1.38
SCARNA6.1-201ENST00000516989 SLC26A4O43511 780 aa6.42□□□□□ -1.38
SCARNA6.1-201ENST00000516989 USO1O60763 962 aaKnown RBP6.42□□□□□ -1.38
SCARNA6.1-201ENST00000516989 CAND2O75155 1236 aa6.42□□□□□ -1.38
SCARNA6.1-201ENST00000516989 CHRNA1P02708 482 aa6.42□□□□□ -1.38
SCARNA6.1-201ENST00000516989 VTNP04004 478 aa6.42□□□□□ -1.38
SCARNA6.1-201ENST00000516989 RPLP2P05387 115 aaKnown RBP6.42□□□□□ -1.38
SCARNA6.1-201ENST00000516989 KRT18P05783 430 aaKnown RBP6.42□□□□□ -1.38
SCARNA6.1-201ENST00000516989 THBS1P07996 1170 aa6.42□□□□□ -1.38
SCARNA6.1-201ENST00000516989 SRGAP2CP0DJJ0 459 aa6.42□□□□□ -1.38
SCARNA6.1-201ENST00000516989 CYP11B2P19099 503 aa6.42□□□□□ -1.38
SCARNA6.1-201ENST00000516989 PLCG1P19174 1290 aa6.42□□□□□ -1.38
SCARNA6.1-201ENST00000516989 GBP2P32456 591 aaPredicted RBP6.42□□□□□ -1.38
SCARNA6.1-201ENST00000516989 STAT6P42226 847 aa6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 174.3 ms