RNA–Protein interactions for RNA: ENST00000516665.1

RNU6-539P-201, Transcript of RNA, U6 small nuclear 539, pseudogene, humanhuman

BASIC

Gene RNU6-539P, Length 103 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-539P-201ENST00000516665 TMEM132CQ8N3T6 1108 aa0.18□□□□□ -2.38
RNU6-539P-201ENST00000516665 OR10H5Q8NGA6 315 aa0.18□□□□□ -2.38
RNU6-539P-201ENST00000516665 TFAP2BQ92481 460 aa0.18□□□□□ -2.38
RNU6-539P-201ENST00000516665 NACC2Q96BF6 587 aa0.18□□□□□ -2.38
RNU6-539P-201ENST00000516665 NOC4LQ9BVI4 516 aaKnown RBP0.18□□□□□ -2.38
RNU6-539P-201ENST00000516665 SPON1Q9HCB6 807 aa0.18□□□□□ -2.38
RNU6-539P-201ENST00000516665 CYP26B1Q9NR63 512 aa0.18□□□□□ -2.38
RNU6-539P-201ENST00000516665 UCKL1Q9NWZ5 548 aa0.18□□□□□ -2.38
RNU6-539P-201ENST00000516665 SEMA5BQ9P283 1151 aa0.18□□□□□ -2.38
RNU6-539P-201ENST00000516665 DSEQ9UL01 958 aa0.18□□□□□ -2.38
RNU6-539P-201ENST00000516665 DENND2AQ9ULE3 1009 aa0.18□□□□□ -2.38
RNU6-539P-201ENST00000516665 DMTF1Q9Y222 760 aa0.18□□□□□ -2.38
RNU6-539P-201ENST00000516665 HIVEP2P31629 2446 aa0.18□□□□□ -2.38
RNU6-539P-201ENST00000516665 TENM1Q9UKZ4 2725 aa0.18□□□□□ -2.38
RNU6-539P-201ENST00000516665 CCDC151A5D8V7 595 aa0.17□□□□□ -2.38
RNU6-539P-201ENST00000516665 PRRT4C9JH25 899 aa0.17□□□□□ -2.38
RNU6-539P-201ENST00000516665 MEFVO15553 781 aaPredicted RBP0.17□□□□□ -2.38
RNU6-539P-201ENST00000516665 ANTXR2P58335 489 aa0.17□□□□□ -2.38
RNU6-539P-201ENST00000516665 ERVK11-1P61568 191 aa0.17□□□□□ -2.38
RNU6-539P-201ENST00000516665 TESK1Q15569 626 aa0.17□□□□□ -2.38
RNU6-539P-201ENST00000516665 LRRFIP1Q32MZ4 808 aaKnown RBP0.17□□□□□ -2.38
RNU6-539P-201ENST00000516665 SPDYE7PQ495Y7 208 aa0.17□□□□□ -2.38
RNU6-539P-201ENST00000516665 ZNF672Q499Z4 452 aaPredicted RBP0.17□□□□□ -2.38
RNU6-539P-201ENST00000516665 PRAMEF17Q5VTA0 474 aa0.17□□□□□ -2.38
RNU6-539P-201ENST00000516665 BTBD8Q5XKL5 378 aa0.17□□□□□ -2.38
RNU6-539P-201ENST00000516665 ALG1LQ6GMV1 187 aa0.17□□□□□ -2.38
RNU6-539P-201ENST00000516665 ABLIM2Q6H8Q1 611 aa0.17□□□□□ -2.38
RNU6-539P-201ENST00000516665 DENND5AQ6IQ26 1287 aa0.17□□□□□ -2.38
RNU6-539P-201ENST00000516665 UNC5AQ6ZN44 842 aa0.17□□□□□ -2.38
RNU6-539P-201ENST00000516665 CATSPERGQ6ZRH7 1159 aa0.17□□□□□ -2.38
RNU6-539P-201ENST00000516665 ZNF548Q8NEK5 533 aaPredicted RBP0.17□□□□□ -2.38
RNU6-539P-201ENST00000516665 WDR48Q8TAF3 677 aa0.17□□□□□ -2.38
RNU6-539P-201ENST00000516665 LMO3Q8TAP4 145 aa0.17□□□□□ -2.38
RNU6-539P-201ENST00000516665 SSH3Q8TE77 659 aa0.17□□□□□ -2.38
RNU6-539P-201ENST00000516665 SH3RF2Q8TEC5 729 aa0.17□□□□□ -2.38
RNU6-539P-201ENST00000516665 MED30Q96HR3 178 aa0.17□□□□□ -2.38
RNU6-539P-201ENST00000516665 HES6Q96HZ4 224 aa0.17□□□□□ -2.38
RNU6-539P-201ENST00000516665 TMEM74Q96NL1 305 aa0.17□□□□□ -2.38
RNU6-539P-201ENST00000516665 HAPLN3Q96S86 360 aa0.17□□□□□ -2.38
RNU6-539P-201ENST00000516665 LGR4Q9BXB1 951 aa0.17□□□□□ -2.38
RNU6-539P-201ENST00000516665 GBP3Q9H0R5 595 aa0.17□□□□□ -2.38
RNU6-539P-201ENST00000516665 NKX2-4Q9H2Z4 354 aa0.17□□□□□ -2.38
RNU6-539P-201ENST00000516665 ZNF556Q9HAH1 456 aa0.17□□□□□ -2.38
RNU6-539P-201ENST00000516665 TMEM74BQ9NUR3 256 aa0.17□□□□□ -2.38
RNU6-539P-201ENST00000516665 KLHL13Q9P2N7 655 aa0.17□□□□□ -2.38
RNU6-539P-201ENST00000516665 APEX2Q9UBZ4 518 aa0.17□□□□□ -2.38
RNU6-539P-201ENST00000516665 EMC9Q9Y3B6 208 aa0.17□□□□□ -2.38
RNU6-539P-201ENST00000516665 NOX1Q9Y5S8 564 aa0.17□□□□□ -2.38
RNU6-539P-201ENST00000516665 AGRNO00468 2067 aa0.17□□□□□ -2.38
RNU6-539P-201ENST00000516665 EVPLQ92817 2033 aa0.16□□□□□ -2.38
RNU6-539P-201ENST00000516665 TMEM88BA6NKF7 163 aa0.16□□□□□ -2.38
RNU6-539P-201ENST00000516665 SMIM22K7EJ46 135 aa0.16□□□□□ -2.38
RNU6-539P-201ENST00000516665 MYO1FO00160 1098 aa0.16□□□□□ -2.38
RNU6-539P-201ENST00000516665 MAFO75444 373 aaPredicted RBP0.16□□□□□ -2.38
RNU6-539P-201ENST00000516665 CRLF1O75462 422 aa0.16□□□□□ -2.38
RNU6-539P-201ENST00000516665 HNRNPA1P09651 372 aaKnown RBP eCLIP0.16□□□□□ -2.38
RNU6-539P-201ENST00000516665 PTPN1P18031 435 aaKnown RBP0.16□□□□□ -2.38
RNU6-539P-201ENST00000516665 EIF4BP23588 611 aaKnown RBP0.16□□□□□ -2.38
RNU6-539P-201ENST00000516665 CRIP2P52943 208 aaPredicted RBP0.16□□□□□ -2.38
RNU6-539P-201ENST00000516665 ZNF239Q16600 458 aaKnown RBP0.16□□□□□ -2.38
RNU6-539P-201ENST00000516665 PRSS53Q2L4Q9 553 aa0.16□□□□□ -2.38
RNU6-539P-201ENST00000516665 FAM153CQ494X1 144 aa0.16□□□□□ -2.38
RNU6-539P-201ENST00000516665 C10orf25Q5T742 122 aa0.16□□□□□ -2.38
RNU6-539P-201ENST00000516665 GTF2IRD2BQ6EKJ0 949 aa0.16□□□□□ -2.38
RNU6-539P-201ENST00000516665 GTF2IRD2Q86UP8 949 aa0.16□□□□□ -2.38
RNU6-539P-201ENST00000516665 PIM3Q86V86 326 aa0.16□□□□□ -2.38
RNU6-539P-201ENST00000516665 MAPKAPK5Q8IW41 473 aa0.16□□□□□ -2.38
RNU6-539P-201ENST00000516665 C5orf34Q96MH7 638 aa0.16□□□□□ -2.38
RNU6-539P-201ENST00000516665 RIC8BQ9NVN3 520 aa0.16□□□□□ -2.38
RNU6-539P-201ENST00000516665 HDAC5Q9UQL6 1122 aa0.16□□□□□ -2.38
RNU6-539P-201ENST00000516665 AKT3Q9Y243 479 aa0.16□□□□□ -2.38
RNU6-539P-201ENST00000516665 TENM3Q9P273 2699 aa0.16□□□□□ -2.38
RNU6-539P-201ENST00000516665 TCRBV5S4A2TA0A5A2 114 aa0.15□□□□□ -2.39
RNU6-539P-201ENST00000516665 TMEM129A0AVI4 362 aa0.15□□□□□ -2.39
RNU6-539P-201ENST00000516665 CCDC78A2IDD5 438 aa0.15□□□□□ -2.39
RNU6-539P-201ENST00000516665 A8MU10 97 aa0.15□□□□□ -2.39
RNU6-539P-201ENST00000516665 ADM5C9JUS6 153 aa0.15□□□□□ -2.39
RNU6-539P-201ENST00000516665 YY2O15391 372 aa0.15□□□□□ -2.39
RNU6-539P-201ENST00000516665 ZG16O60844 167 aa0.15□□□□□ -2.39
RNU6-539P-201ENST00000516665 HNRNPCP07910 306 aaKnown RBP eCLIP0.15□□□□□ -2.39
RNU6-539P-201ENST00000516665 GBP2P32456 591 aaPredicted RBP0.15□□□□□ -2.39
RNU6-539P-201ENST00000516665 KIR2DL3P43628 341 aa0.15□□□□□ -2.39
RNU6-539P-201ENST00000516665 CXADRP78310 365 aa0.15□□□□□ -2.39
RNU6-539P-201ENST00000516665 ACBD5Q5T8D3 534 aaPredicted RBP0.15□□□□□ -2.39
RNU6-539P-201ENST00000516665 AGAP9Q5VTM2 703 aa0.15□□□□□ -2.39
RNU6-539P-201ENST00000516665 KHDRBS2Q5VWX1 349 aaKnown RBP0.15□□□□□ -2.39
RNU6-539P-201ENST00000516665 FBXL19Q6PCT2 694 aa0.15□□□□□ -2.39
RNU6-539P-201ENST00000516665 DRICH1Q6PGQ1 229 aaPredicted RBP0.15□□□□□ -2.39
RNU6-539P-201ENST00000516665 COLCA1Q6ZS62 124 aa0.15□□□□□ -2.39
RNU6-539P-201ENST00000516665 SPATA2LQ8IUW3 424 aaPredicted RBP0.15□□□□□ -2.39
RNU6-539P-201ENST00000516665 OR56A1Q8NGH5 318 aa0.15□□□□□ -2.39
RNU6-539P-201ENST00000516665 ASB5Q8WWX0 329 aa0.15□□□□□ -2.39
RNU6-539P-201ENST00000516665 ATP2A3Q93084 1043 aa0.15□□□□□ -2.39
RNU6-539P-201ENST00000516665 ZSWIM1Q9BR11 485 aa0.15□□□□□ -2.39
RNU6-539P-201ENST00000516665 SAE1Q9UBE0 346 aaPredicted RBP0.15□□□□□ -2.39
RNU6-539P-201ENST00000516665 KCNG2Q9UJ96 466 aa0.15□□□□□ -2.39
RNU6-539P-201ENST00000516665 SUGT1Q9Y2Z0 365 aa0.15□□□□□ -2.39
RNU6-539P-201ENST00000516665 IGKV3D-15A0A087WSY6 115 aa0.14□□□□□ -2.39
RNU6-539P-201ENST00000516665 MINDY4BA8MYZ0 360 aa0.14□□□□□ -2.39
RNU6-539P-201ENST00000516665 PRR5-ARHGAP8B1AHC4 643 aa0.14□□□□□ -2.39
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms