RNA–Protein interactions for RNA: ENST00000516520.1

SCARNA16.2-201, small Cajal body-specific RNA 16, humanhuman

BASIC

Gene SCARNA16, Length 172 nt, Biotype scaRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA16.2-201ENST00000516520 LPLP06858 475 aa3.65□□□□□ -1.83
SCARNA16.2-201ENST00000516520 SNRPA1P09661 255 aaKnown RBP3.65□□□□□ -1.83
SCARNA16.2-201ENST00000516520 MYCLP1P12525 358 aaPredicted RBP3.65□□□□□ -1.83
SCARNA16.2-201ENST00000516520 CLRN1P58418 232 aa3.65□□□□□ -1.83
SCARNA16.2-201ENST00000516520 CCDC142Q17RM4 750 aa3.65□□□□□ -1.83
SCARNA16.2-201ENST00000516520 CPEB4Q17RY0 729 aaKnown RBP eCLIP3.65□□□□□ -1.83
SCARNA16.2-201ENST00000516520 MST1LQ2TV78 715 aa3.65□□□□□ -1.83
SCARNA16.2-201ENST00000516520 PDCD4Q53EL6 469 aaKnown RBP3.65□□□□□ -1.83
SCARNA16.2-201ENST00000516520 CT83Q5H943 113 aa3.65□□□□□ -1.83
SCARNA16.2-201ENST00000516520 FAM47AQ5JRC9 791 aa3.65□□□□□ -1.83
SCARNA16.2-201ENST00000516520 PRAMEF14Q5SWL7 426 aa3.65□□□□□ -1.83
SCARNA16.2-201ENST00000516520 ABHD17BQ5VST6 288 aa3.65□□□□□ -1.83
SCARNA16.2-201ENST00000516520 ANKS6Q68DC2 871 aa3.65□□□□□ -1.83
SCARNA16.2-201ENST00000516520 OLFML1Q6UWY5 402 aa3.65□□□□□ -1.83
SCARNA16.2-201ENST00000516520 ADGRG3Q86Y34 549 aa3.65□□□□□ -1.83
SCARNA16.2-201ENST00000516520 SYT12Q8IV01 421 aa3.65□□□□□ -1.83
SCARNA16.2-201ENST00000516520 RNF169Q8NCN4 708 aa3.65□□□□□ -1.83
SCARNA16.2-201ENST00000516520 LINC00476Q8WZB0 136 aa3.65□□□□□ -1.83
SCARNA16.2-201ENST00000516520 SLC9A6Q92581 669 aa3.65□□□□□ -1.83
SCARNA16.2-201ENST00000516520 CAVIN3Q969G5 261 aa3.65□□□□□ -1.83
SCARNA16.2-201ENST00000516520 TTC1Q99614 292 aa3.65□□□□□ -1.83
SCARNA16.2-201ENST00000516520 REXO4Q9GZR2 422 aaKnown RBP3.65□□□□□ -1.83
SCARNA16.2-201ENST00000516520 SYBUQ9NX95 663 aa3.65□□□□□ -1.83
SCARNA16.2-201ENST00000516520 ATP11BQ9Y2G3 1177 aa3.65□□□□□ -1.83
SCARNA16.2-201ENST00000516520 FPGT-TNNI3KV9GXZ4 949 aa3.65□□□□□ -1.83
SCARNA16.2-201ENST00000516520 PIPSLA2A3N6 862 aa3.64□□□□□ -1.83
SCARNA16.2-201ENST00000516520 MARCH11A6NNE9 402 aa3.64□□□□□ -1.83
SCARNA16.2-201ENST00000516520 MTHFD2P13995 350 aa3.64□□□□□ -1.83
SCARNA16.2-201ENST00000516520 ENPP1P22413 925 aa3.64□□□□□ -1.83
SCARNA16.2-201ENST00000516520 CD38P28907 300 aa3.64□□□□□ -1.83
SCARNA16.2-201ENST00000516520 PTTG1IPP53801 180 aa3.64□□□□□ -1.83
SCARNA16.2-201ENST00000516520 MRPS21P82921 87 aaKnown RBP3.64□□□□□ -1.83
SCARNA16.2-201ENST00000516520 CSRP2Q16527 193 aa3.64□□□□□ -1.83
SCARNA16.2-201ENST00000516520 RRP12Q5JTH9 1297 aaKnown RBP3.64□□□□□ -1.83
SCARNA16.2-201ENST00000516520 MFSD14BQ5SR56 506 aa3.64□□□□□ -1.83
SCARNA16.2-201ENST00000516520 ATXN7L2Q5T6C5 722 aaPredicted RBP3.64□□□□□ -1.83
SCARNA16.2-201ENST00000516520 FAM102AQ5T9C2 384 aaPredicted RBP3.64□□□□□ -1.83
SCARNA16.2-201ENST00000516520 SYCE2Q6PIF2 218 aa3.64□□□□□ -1.83
SCARNA16.2-201ENST00000516520 HDGFL2Q7Z4V5 671 aaPredicted RBP3.64□□□□□ -1.83
SCARNA16.2-201ENST00000516520 CMTR2Q8IYT2 770 aaKnown RBP3.64□□□□□ -1.83
SCARNA16.2-201ENST00000516520 OR7D4Q8NG98 312 aa3.64□□□□□ -1.83
SCARNA16.2-201ENST00000516520 EAF2Q96CJ1 260 aaPredicted RBP3.64□□□□□ -1.83
SCARNA16.2-201ENST00000516520 CEP95Q96GE4 821 aa3.64□□□□□ -1.83
SCARNA16.2-201ENST00000516520 KRTAP9-8Q9BYQ0 159 aa3.64□□□□□ -1.83
SCARNA16.2-201ENST00000516520 PRDM12Q9H4Q4 367 aa3.64□□□□□ -1.83
SCARNA16.2-201ENST00000516520 TOPORSQ9NS56 1045 aaPredicted RBP3.64□□□□□ -1.83
SCARNA16.2-201ENST00000516520 USP15Q9Y4E8 981 aaPredicted RBP3.64□□□□□ -1.83
SCARNA16.2-201ENST00000516520 KIAA0355O15063 1070 aa3.63□□□□□ -1.83
SCARNA16.2-201ENST00000516520 ZNF185O15231 689 aa3.63□□□□□ -1.83
SCARNA16.2-201ENST00000516520 CDKL5O76039 1030 aa3.63□□□□□ -1.83
SCARNA16.2-201ENST00000516520 FOSP01100 380 aaPredicted RBP3.63□□□□□ -1.83
SCARNA16.2-201ENST00000516520 ECHS1P30084 290 aa3.63□□□□□ -1.83
SCARNA16.2-201ENST00000516520 PTPN7P35236 360 aa3.63□□□□□ -1.83
SCARNA16.2-201ENST00000516520 SEC24CP53992 1094 aa3.63□□□□□ -1.83
SCARNA16.2-201ENST00000516520 MRPS9P82933 396 aaKnown RBP3.63□□□□□ -1.83
SCARNA16.2-201ENST00000516520 RESTQ13127 1097 aa3.63□□□□□ -1.83
SCARNA16.2-201ENST00000516520 SP140Q13342 867 aa3.63□□□□□ -1.83
SCARNA16.2-201ENST00000516520 PDCD1Q15116 288 aa3.63□□□□□ -1.83
SCARNA16.2-201ENST00000516520 SPDYE7PQ495Y7 208 aa3.63□□□□□ -1.83
SCARNA16.2-201ENST00000516520 AGAP9Q5VTM2 703 aa3.63□□□□□ -1.83
SCARNA16.2-201ENST00000516520 DDX46Q7L014 1031 aaKnown RBP3.63□□□□□ -1.83
SCARNA16.2-201ENST00000516520 ZNF572Q7Z3I7 529 aaPredicted RBP3.63□□□□□ -1.83
SCARNA16.2-201ENST00000516520 RHOT2Q8IXI1 618 aa3.63□□□□□ -1.83
SCARNA16.2-201ENST00000516520 DRC7Q8IY82 874 aa3.63□□□□□ -1.83
SCARNA16.2-201ENST00000516520 TRMT2AQ8IZ69 625 aaKnown RBP3.63□□□□□ -1.83
SCARNA16.2-201ENST00000516520 CLRN3Q8NCR9 226 aa3.63□□□□□ -1.83
SCARNA16.2-201ENST00000516520 GPR156Q8NFN8 814 aa3.63□□□□□ -1.83
SCARNA16.2-201ENST00000516520 AUTS2Q8WXX7 1259 aa3.63□□□□□ -1.83
SCARNA16.2-201ENST00000516520 NELL1Q92832 810 aa3.63□□□□□ -1.83
SCARNA16.2-201ENST00000516520 ADAM2Q99965 735 aa3.63□□□□□ -1.83
SCARNA16.2-201ENST00000516520 SYNPO2LQ9H987 977 aa3.63□□□□□ -1.83
SCARNA16.2-201ENST00000516520 BCO1Q9HAY6 547 aa3.63□□□□□ -1.83
SCARNA16.2-201ENST00000516520 RNF181Q9P0P0 153 aa3.63□□□□□ -1.83
SCARNA16.2-201ENST00000516520 DPP7Q9UHL4 492 aa3.63□□□□□ -1.83
SCARNA16.2-201ENST00000516520 INSL6Q9Y581 213 aa3.63□□□□□ -1.83
SCARNA16.2-201ENST00000516520 EPN1Q9Y6I3 576 aaPredicted RBP3.63□□□□□ -1.83
SCARNA16.2-201ENST00000516520 UNC119BA6NIH7 251 aa3.62□□□□□ -1.83
SCARNA16.2-201ENST00000516520 DRGXA6NNA5 263 aa3.62□□□□□ -1.83
SCARNA16.2-201ENST00000516520 CXorf49A8MYA2 514 aaPredicted RBP3.62□□□□□ -1.83
SCARNA16.2-201ENST00000516520 NEMP1O14524 444 aa3.62□□□□□ -1.83
SCARNA16.2-201ENST00000516520 AKR1B10O60218 316 aa3.62□□□□□ -1.83
SCARNA16.2-201ENST00000516520 SPDEFO95238 335 aa3.62□□□□□ -1.83
SCARNA16.2-201ENST00000516520 ESRRBO95718 433 aa3.62□□□□□ -1.83
SCARNA16.2-201ENST00000516520 CFIP05156 583 aa3.62□□□□□ -1.83
SCARNA16.2-201ENST00000516520 EGR2P11161 476 aaPredicted RBP3.62□□□□□ -1.83
SCARNA16.2-201ENST00000516520 IL2RBP14784 551 aa3.62□□□□□ -1.83
SCARNA16.2-201ENST00000516520 TYRP1P17643 537 aa3.62□□□□□ -1.83
SCARNA16.2-201ENST00000516520 FDXRP22570 491 aa3.62□□□□□ -1.83
SCARNA16.2-201ENST00000516520 CANXP27824 592 aaKnown RBP3.62□□□□□ -1.83
SCARNA16.2-201ENST00000516520 CHN2P52757 468 aa3.62□□□□□ -1.83
SCARNA16.2-201ENST00000516520 MPP3Q13368 585 aa3.62□□□□□ -1.83
SCARNA16.2-201ENST00000516520 TP53BP2Q13625 1128 aa3.62□□□□□ -1.83
SCARNA16.2-201ENST00000516520 METRNLQ641Q3 311 aa3.62□□□□□ -1.83
SCARNA16.2-201ENST00000516520 RD3Q7Z3Z2 195 aa3.62□□□□□ -1.83
SCARNA16.2-201ENST00000516520 RNF180Q86T96 592 aa3.62□□□□□ -1.83
SCARNA16.2-201ENST00000516520 NOP9Q86U38 636 aaKnown RBP3.62□□□□□ -1.83
SCARNA16.2-201ENST00000516520 OR56A1Q8NGH5 318 aa3.62□□□□□ -1.83
SCARNA16.2-201ENST00000516520 RIN2Q8WYP3 895 aaPredicted RBP3.62□□□□□ -1.83
SCARNA16.2-201ENST00000516520 FATE1Q969F0 183 aa3.62□□□□□ -1.83
SCARNA16.2-201ENST00000516520 BBC3Q96PG8 261 aaPredicted RBP3.62□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms