RNA–Protein interactions for RNA: ENST00000516414.1

RNU6-1049P-201, Transcript of RNA, U6 small nuclear 1049, pseudogene, humanhuman

BASIC

Gene RNU6-1049P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1049P-201ENST00000516414 TESMINQ9Y4I5 508 aa0.53□□□□□ -2.32
RNU6-1049P-201ENST00000516414 PCDHA3Q9Y5H8 950 aa0.53□□□□□ -2.32
RNU6-1049P-201ENST00000516414 USP19O94966 1318 aa0.53□□□□□ -2.32
RNU6-1049P-201ENST00000516414 TNKSO95271 1327 aa0.53□□□□□ -2.32
RNU6-1049P-201ENST00000516414 SPATA31A6Q5VVP1 1343 aa0.53□□□□□ -2.32
RNU6-1049P-201ENST00000516414 WDR33Q9C0J8 1336 aaKnown RBP0.53□□□□□ -2.32
RNU6-1049P-201ENST00000516414 NOTCH4Q99466 2003 aa0.53□□□□□ -2.32
RNU6-1049P-201ENST00000516414 CACNA1IQ9P0X4 2223 aa0.53□□□□□ -2.33
RNU6-1049P-201ENST00000516414 WDR81Q562E7 1941 aa0.52□□□□□ -2.33
RNU6-1049P-201ENST00000516414 CCDC187A0A096LP49 1063 aa0.52□□□□□ -2.33
RNU6-1049P-201ENST00000516414 UBA6A0AVT1 1052 aaPredicted RBP0.52□□□□□ -2.33
RNU6-1049P-201ENST00000516414 KRTAP23-1A1A580 65 aa0.52□□□□□ -2.33
RNU6-1049P-201ENST00000516414 ZBTB7CA1YPR0 619 aa0.52□□□□□ -2.33
RNU6-1049P-201ENST00000516414 C9orf118A6NHY6 69 aa0.52□□□□□ -2.33
RNU6-1049P-201ENST00000516414 TMEM200CA6NKL6 621 aa0.52□□□□□ -2.33
RNU6-1049P-201ENST00000516414 IFITM10A6NMD0 228 aa0.52□□□□□ -2.33
RNU6-1049P-201ENST00000516414 A6NNZ2 444 aa0.52□□□□□ -2.33
RNU6-1049P-201ENST00000516414 TBKBP1A7MCY6 615 aa0.52□□□□□ -2.33
RNU6-1049P-201ENST00000516414 LINC00473A8K010 186 aa0.52□□□□□ -2.33
RNU6-1049P-201ENST00000516414 GSG1L2A8MUP6 293 aa0.52□□□□□ -2.33
RNU6-1049P-201ENST00000516414 TISP43B9A030 160 aa0.52□□□□□ -2.33
RNU6-1049P-201ENST00000516414 KRIT1O00522 736 aa0.52□□□□□ -2.33
RNU6-1049P-201ENST00000516414 CYR61O00622 381 aa0.52□□□□□ -2.33
RNU6-1049P-201ENST00000516414 ZNF213O14771 459 aa0.52□□□□□ -2.33
RNU6-1049P-201ENST00000516414 DCLK1O15075 740 aa0.52□□□□□ -2.33
RNU6-1049P-201ENST00000516414 DNAJC6O75061 913 aa0.52□□□□□ -2.33
RNU6-1049P-201ENST00000516414 RECQL4O94761 1208 aa0.52□□□□□ -2.33
RNU6-1049P-201ENST00000516414 SUN1O94901 812 aa0.52□□□□□ -2.33
RNU6-1049P-201ENST00000516414 ZRANB2O95218 330 aaKnown RBP eCLIP0.52□□□□□ -2.33
RNU6-1049P-201ENST00000516414 EYA4O95677 639 aa0.52□□□□□ -2.33
RNU6-1049P-201ENST00000516414 F2P00734 622 aa0.52□□□□□ -2.33
RNU6-1049P-201ENST00000516414 RAP2AP10114 183 aa0.52□□□□□ -2.33
RNU6-1049P-201ENST00000516414 EGR2P11161 476 aaPredicted RBP0.52□□□□□ -2.33
RNU6-1049P-201ENST00000516414 ALOX15P16050 662 aaPredicted RBP0.52□□□□□ -2.33
RNU6-1049P-201ENST00000516414 PPP3CBP16298 524 aa0.52□□□□□ -2.33
RNU6-1049P-201ENST00000516414 ATP2B1P20020 1258 aa0.52□□□□□ -2.33
RNU6-1049P-201ENST00000516414 VAMP1P23763 118 aa0.52□□□□□ -2.33
RNU6-1049P-201ENST00000516414 PCSK6P29122 969 aa0.52□□□□□ -2.33
RNU6-1049P-201ENST00000516414 ADORA2AP29274 412 aa0.52□□□□□ -2.33
RNU6-1049P-201ENST00000516414 NTSR1P30989 418 aa0.52□□□□□ -2.33
RNU6-1049P-201ENST00000516414 ARHGAP25P42331 645 aa0.52□□□□□ -2.33
RNU6-1049P-201ENST00000516414 RFX5P48382 616 aaPredicted RBP0.52□□□□□ -2.33
RNU6-1049P-201ENST00000516414 ALDH5A1P51649 535 aaPredicted RBP0.52□□□□□ -2.33
RNU6-1049P-201ENST00000516414 CLCN2P51788 898 aa0.52□□□□□ -2.33
RNU6-1049P-201ENST00000516414 ITGA8P53708 1063 aa0.52□□□□□ -2.33
RNU6-1049P-201ENST00000516414 MAPK10P53779 464 aa0.52□□□□□ -2.33
RNU6-1049P-201ENST00000516414 C21orf58P58505 322 aa0.52□□□□□ -2.33
RNU6-1049P-201ENST00000516414 KRTAP10-6P60371 365 aaPredicted RBP0.52□□□□□ -2.33
RNU6-1049P-201ENST00000516414 KRTAP10-11P60412 298 aa0.52□□□□□ -2.33
RNU6-1049P-201ENST00000516414 PSMC1P62191 440 aaKnown RBP0.52□□□□□ -2.33
RNU6-1049P-201ENST00000516414 TMPRSS15P98073 1019 aa0.52□□□□□ -2.33
RNU6-1049P-201ENST00000516414 DSC2Q02487 901 aa0.52□□□□□ -2.33
RNU6-1049P-201ENST00000516414 SRSF4Q08170 494 aaKnown RBP0.52□□□□□ -2.33
RNU6-1049P-201ENST00000516414 FOXF2Q12947 444 aa0.52□□□□□ -2.33
RNU6-1049P-201ENST00000516414 SNAPC2Q13487 334 aa0.52□□□□□ -2.33
RNU6-1049P-201ENST00000516414 NFYCQ13952 458 aa0.52□□□□□ -2.33
RNU6-1049P-201ENST00000516414 CNGB1Q14028 1251 aaPredicted RBP0.52□□□□□ -2.33
RNU6-1049P-201ENST00000516414 LRRC32Q14392 662 aa0.52□□□□□ -2.33
RNU6-1049P-201ENST00000516414 ZNF267Q14586 743 aaPredicted RBP0.52□□□□□ -2.33
RNU6-1049P-201ENST00000516414 UBXN2BQ14CS0 331 aa0.52□□□□□ -2.33
RNU6-1049P-201ENST00000516414 LLGL1Q15334 1064 aa0.52□□□□□ -2.33
RNU6-1049P-201ENST00000516414 VPS72Q15906 364 aa0.52□□□□□ -2.33
RNU6-1049P-201ENST00000516414 NFE2L2Q16236 605 aa0.52□□□□□ -2.33
RNU6-1049P-201ENST00000516414 SMN1Q16637 294 aaKnown RBP0.52□□□□□ -2.33
RNU6-1049P-201ENST00000516414 CYP2A13Q16696 494 aa0.52□□□□□ -2.33
RNU6-1049P-201ENST00000516414 CCDC142Q17RM4 750 aa0.52□□□□□ -2.33
RNU6-1049P-201ENST00000516414 BMT2Q1RMZ1 405 aa0.52□□□□□ -2.33
RNU6-1049P-201ENST00000516414 KIZQ2M2Z5 673 aa0.52□□□□□ -2.33
RNU6-1049P-201ENST00000516414 TRIM71Q2Q1W2 868 aaKnown RBP0.52□□□□□ -2.33
RNU6-1049P-201ENST00000516414 MST1LQ2TV78 715 aa0.52□□□□□ -2.33
RNU6-1049P-201ENST00000516414 BEAN1Q3B7T3 259 aa0.52□□□□□ -2.33
RNU6-1049P-201ENST00000516414 C2orf27AQ580R0 203 aa0.52□□□□□ -2.33
RNU6-1049P-201ENST00000516414 TSTD2Q5T7W7 516 aa0.52□□□□□ -2.33
RNU6-1049P-201ENST00000516414 ZKSCAN2Q63HK3 967 aa0.52□□□□□ -2.33
RNU6-1049P-201ENST00000516414 NUGGCQ68CJ6 796 aa0.52□□□□□ -2.33
RNU6-1049P-201ENST00000516414 KRT40Q6A162 431 aa0.52□□□□□ -2.33
RNU6-1049P-201ENST00000516414 IQCEQ6IPM2 695 aa0.52□□□□□ -2.33
RNU6-1049P-201ENST00000516414 KRTAP5-1Q6L8H4 278 aa0.52□□□□□ -2.33
RNU6-1049P-201ENST00000516414 SWSAP1Q6NVH7 229 aa0.52□□□□□ -2.33
RNU6-1049P-201ENST00000516414 ZNF529Q6P280 563 aa0.52□□□□□ -2.33
RNU6-1049P-201ENST00000516414 BORAQ6PGQ7 559 aa0.52□□□□□ -2.33
RNU6-1049P-201ENST00000516414 POMZP3Q6PJE2 187 aa0.52□□□□□ -2.33
RNU6-1049P-201ENST00000516414 NAPRTQ6XQN6 538 aa0.52□□□□□ -2.33
RNU6-1049P-201ENST00000516414 MAVSQ7Z434 540 aa0.52□□□□□ -2.33
RNU6-1049P-201ENST00000516414 HDGFL2Q7Z4V5 671 aaPredicted RBP0.52□□□□□ -2.33
RNU6-1049P-201ENST00000516414 IRF2BP2Q7Z5L9 587 aa0.52□□□□□ -2.33
RNU6-1049P-201ENST00000516414 POLNQ7Z5Q5 900 aa0.52□□□□□ -2.33
RNU6-1049P-201ENST00000516414 MRGPRGQ86SM5 289 aa0.52□□□□□ -2.33
RNU6-1049P-201ENST00000516414 RNF180Q86T96 592 aa0.52□□□□□ -2.33
RNU6-1049P-201ENST00000516414 PPP1R3BQ86XI6 285 aa0.52□□□□□ -2.33
RNU6-1049P-201ENST00000516414 GSPT2Q8IYD1 628 aaKnown RBP0.52□□□□□ -2.33
RNU6-1049P-201ENST00000516414 ZZZ3Q8IYH5 903 aa0.52□□□□□ -2.33
RNU6-1049P-201ENST00000516414 CAMKK1Q8N5S9 505 aa0.52□□□□□ -2.33
RNU6-1049P-201ENST00000516414 NRACQ8N912 160 aa0.52□□□□□ -2.33
RNU6-1049P-201ENST00000516414 JMYQ8N9B5 988 aa0.52□□□□□ -2.33
RNU6-1049P-201ENST00000516414 BOLLQ8N9W6 283 aaKnown RBP0.52□□□□□ -2.33
RNU6-1049P-201ENST00000516414 CHST14Q8NCH0 376 aa0.52□□□□□ -2.33
RNU6-1049P-201ENST00000516414 GLB1L3Q8NCI6 653 aaPredicted RBP0.52□□□□□ -2.33
RNU6-1049P-201ENST00000516414 SLC17A8Q8NDX2 589 aa0.52□□□□□ -2.33
RNU6-1049P-201ENST00000516414 ZNF548Q8NEK5 533 aaPredicted RBP0.52□□□□□ -2.33
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms