RNA–Protein interactions for RNA: ENST00000516329.1

SNORA40.12-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 111 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.12-201ENST00000516329 RAP2AP10114 183 aa4.39□□□□□ -1.71
SNORA40.12-201ENST00000516329 ZFP36P26651 326 aaKnown RBP4.39□□□□□ -1.71
SNORA40.12-201ENST00000516329 SREBF1P36956 1147 aa4.39□□□□□ -1.71
SNORA40.12-201ENST00000516329 IARSP41252 1262 aaKnown RBP4.39□□□□□ -1.71
SNORA40.12-201ENST00000516329 MTNR1BP49286 362 aa4.39□□□□□ -1.71
SNORA40.12-201ENST00000516329 TGFB2P61812 414 aa4.39□□□□□ -1.71
SNORA40.12-201ENST00000516329 MALLQ13021 153 aa4.39□□□□□ -1.71
SNORA40.12-201ENST00000516329 KLF1Q13351 362 aaPredicted RBP4.39□□□□□ -1.71
SNORA40.12-201ENST00000516329 BMT2Q1RMZ1 405 aa4.39□□□□□ -1.71
SNORA40.12-201ENST00000516329 FAM180AQ6UWF9 173 aa4.39□□□□□ -1.71
SNORA40.12-201ENST00000516329 LRRC55Q6ZSA7 311 aa4.39□□□□□ -1.71
SNORA40.12-201ENST00000516329 GDF7Q7Z4P5 450 aa4.39□□□□□ -1.71
SNORA40.12-201ENST00000516329 MRGPREQ86SM8 312 aa4.39□□□□□ -1.71
SNORA40.12-201ENST00000516329 LDLRAD3Q86YD5 345 aa4.39□□□□□ -1.71
SNORA40.12-201ENST00000516329 PPM1NQ8N819 430 aa4.39□□□□□ -1.71
SNORA40.12-201ENST00000516329 OR7D4Q8NG98 312 aa4.39□□□□□ -1.71
SNORA40.12-201ENST00000516329 PROKR1Q8TCW9 393 aa4.39□□□□□ -1.71
SNORA40.12-201ENST00000516329 STON2Q8WXE9 905 aa4.39□□□□□ -1.71
SNORA40.12-201ENST00000516329 CHFRQ96EP1 664 aa4.39□□□□□ -1.71
SNORA40.12-201ENST00000516329 SENP6Q9GZR1 1112 aaPredicted RBP4.39□□□□□ -1.71
SNORA40.12-201ENST00000516329 BCO1Q9HAY6 547 aa4.39□□□□□ -1.71
SNORA40.12-201ENST00000516329 SLC5A4Q9NY91 659 aa4.39□□□□□ -1.71
SNORA40.12-201ENST00000516329 SCOCQ9UIL1 159 aa4.39□□□□□ -1.71
SNORA40.12-201ENST00000516329 GPR45Q9Y5Y3 372 aa4.39□□□□□ -1.71
SNORA40.12-201ENST00000516329 ZNF185O15231 689 aa4.38□□□□□ -1.71
SNORA40.12-201ENST00000516329 LPXNO60711 386 aa4.38□□□□□ -1.71
SNORA40.12-201ENST00000516329 NCR1O76036 304 aa4.38□□□□□ -1.71
SNORA40.12-201ENST00000516329 ABHD16AO95870 558 aa4.38□□□□□ -1.71
SNORA40.12-201ENST00000516329 GSPT1P15170 499 aaKnown RBP4.38□□□□□ -1.71
SNORA40.12-201ENST00000516329 MCAMP43121 646 aa4.38□□□□□ -1.71
SNORA40.12-201ENST00000516329 ALDH1A3P47895 512 aa4.38□□□□□ -1.71
SNORA40.12-201ENST00000516329 CDKN1CP49918 316 aaPredicted RBP4.38□□□□□ -1.71
SNORA40.12-201ENST00000516329 CHN2P52757 468 aa4.38□□□□□ -1.71
SNORA40.12-201ENST00000516329 FSTL1Q12841 308 aa4.38□□□□□ -1.71
SNORA40.12-201ENST00000516329 SEPT2Q15019 361 aa4.38□□□□□ -1.71
SNORA40.12-201ENST00000516329 ANO4Q32M45 955 aa4.38□□□□□ -1.71
SNORA40.12-201ENST00000516329 TIGD2Q4W5G0 525 aa4.38□□□□□ -1.71
SNORA40.12-201ENST00000516329 AFMIDQ63HM1 303 aa4.38□□□□□ -1.71
SNORA40.12-201ENST00000516329 KCNV1Q6PIU1 500 aa4.38□□□□□ -1.71
SNORA40.12-201ENST00000516329 ZNF572Q7Z3I7 529 aaPredicted RBP4.38□□□□□ -1.71
SNORA40.12-201ENST00000516329 AMER2Q8N7J2 671 aa4.38□□□□□ -1.71
SNORA40.12-201ENST00000516329 ZFP28Q8NHY6 868 aa4.38□□□□□ -1.71
SNORA40.12-201ENST00000516329 HOXB13Q92826 284 aaPredicted RBP4.38□□□□□ -1.71
SNORA40.12-201ENST00000516329 LENG9Q96B70 501 aa4.38□□□□□ -1.71
SNORA40.12-201ENST00000516329 SLC46A2Q9BY10 475 aa4.38□□□□□ -1.71
SNORA40.12-201ENST00000516329 IKZF4Q9H2S9 585 aa4.38□□□□□ -1.71
SNORA40.12-201ENST00000516329 TMX1Q9H3N1 280 aa4.38□□□□□ -1.71
SNORA40.12-201ENST00000516329 LANCL2Q9NS86 450 aa4.38□□□□□ -1.71
SNORA40.12-201ENST00000516329 AJAP1Q9UKB5 411 aaPredicted RBP4.38□□□□□ -1.71
SNORA40.12-201ENST00000516329 CLCA2Q9UQC9 943 aa4.38□□□□□ -1.71
SNORA40.12-201ENST00000516329 ATP8A1Q9Y2Q0 1164 aa4.38□□□□□ -1.71
SNORA40.12-201ENST00000516329 CHST2Q9Y4C5 530 aa4.38□□□□□ -1.71
SNORA40.12-201ENST00000516329 PHLDB1Q86UU1 1377 aa4.38□□□□□ -1.71
SNORA40.12-201ENST00000516329 SBNO2Q9Y2G9 1366 aa4.38□□□□□ -1.71
SNORA40.12-201ENST00000516329 SUV39H1O43463 412 aa4.37□□□□□ -1.71
SNORA40.12-201ENST00000516329 NDUFA10O95299 355 aa4.37□□□□□ -1.71
SNORA40.12-201ENST00000516329 ITGB1P05556 798 aa4.37□□□□□ -1.71
SNORA40.12-201ENST00000516329 SNRPA1P09661 255 aaKnown RBP4.37□□□□□ -1.71
SNORA40.12-201ENST00000516329 RBP3P10745 1247 aa4.37□□□□□ -1.71
SNORA40.12-201ENST00000516329 ALOX15P16050 662 aaPredicted RBP4.37□□□□□ -1.71
SNORA40.12-201ENST00000516329 ZSCAN20P17040 1043 aaPredicted RBP4.37□□□□□ -1.71
SNORA40.12-201ENST00000516329 LAG3P18627 525 aa4.37□□□□□ -1.71
SNORA40.12-201ENST00000516329 FPR1P21462 350 aa4.37□□□□□ -1.71
SNORA40.12-201ENST00000516329 AGXTP21549 392 aa4.37□□□□□ -1.71
SNORA40.12-201ENST00000516329 MGAT1P26572 445 aa4.37□□□□□ -1.71
SNORA40.12-201ENST00000516329 CLRN1P58418 232 aa4.37□□□□□ -1.71
SNORA40.12-201ENST00000516329 FAM50AQ14320 339 aaKnown RBP4.37□□□□□ -1.71
SNORA40.12-201ENST00000516329 ACAP2Q15057 778 aa4.37□□□□□ -1.71
SNORA40.12-201ENST00000516329 ABCB5Q2M3G0 1257 aa4.37□□□□□ -1.71
SNORA40.12-201ENST00000516329 PDCD4Q53EL6 469 aaKnown RBP4.37□□□□□ -1.71
SNORA40.12-201ENST00000516329 CRB2Q5IJ48 1285 aa4.37□□□□□ -1.71
SNORA40.12-201ENST00000516329 FAM47AQ5JRC9 791 aa4.37□□□□□ -1.71
SNORA40.12-201ENST00000516329 ATXN7L2Q5T6C5 722 aaPredicted RBP4.37□□□□□ -1.71
SNORA40.12-201ENST00000516329 PGM2L1Q6PCE3 622 aa4.37□□□□□ -1.71
SNORA40.12-201ENST00000516329 DRICH1Q6PGQ1 229 aaPredicted RBP4.37□□□□□ -1.71
SNORA40.12-201ENST00000516329 Q6ZPA2 131 aa4.37□□□□□ -1.71
SNORA40.12-201ENST00000516329 RHOUQ7L0Q8 258 aa4.37□□□□□ -1.71
SNORA40.12-201ENST00000516329 MRGPRGQ86SM5 289 aa4.37□□□□□ -1.71
SNORA40.12-201ENST00000516329 VRK3Q8IV63 474 aa4.37□□□□□ -1.71
SNORA40.12-201ENST00000516329 RPUSD2Q8IZ73 545 aaKnown RBP4.37□□□□□ -1.71
SNORA40.12-201ENST00000516329 OR2I1PQ8NGU4 316 aa4.37□□□□□ -1.71
SNORA40.12-201ENST00000516329 CCHCR1Q8TD31 782 aa4.37□□□□□ -1.71
SNORA40.12-201ENST00000516329 DPF2Q92785 391 aa4.37□□□□□ -1.71
SNORA40.12-201ENST00000516329 MTMR8Q96EF0 704 aa4.37□□□□□ -1.71
SNORA40.12-201ENST00000516329 DCLRE1CQ96SD1 692 aaKnown RBP4.37□□□□□ -1.71
SNORA40.12-201ENST00000516329 NEU1Q99519 415 aa4.37□□□□□ -1.71
SNORA40.12-201ENST00000516329 TTPALQ9BTX7 342 aa4.37□□□□□ -1.71
SNORA40.12-201ENST00000516329 MRI1Q9BV20 369 aa4.37□□□□□ -1.71
SNORA40.12-201ENST00000516329 AKIP1Q9NQ31 210 aa4.37□□□□□ -1.71
SNORA40.12-201ENST00000516329 ANKFY1Q9P2R3 1169 aa4.37□□□□□ -1.71
SNORA40.12-201ENST00000516329 FZD1Q9UP38 647 aa4.37□□□□□ -1.71
SNORA40.12-201ENST00000516329 RUVBL1Q9Y265 456 aaKnown RBP4.37□□□□□ -1.71
SNORA40.12-201ENST00000516329 MAP3K2Q9Y2U5 619 aa4.37□□□□□ -1.71
SNORA40.12-201ENST00000516329 USP15Q9Y4E8 981 aaPredicted RBP4.37□□□□□ -1.71
SNORA40.12-201ENST00000516329 WDR33Q9C0J8 1336 aaKnown RBP4.37□□□□□ -1.71
SNORA40.12-201ENST00000516329 ATRNL1Q5VV63 1379 aa4.37□□□□□ -1.71
SNORA40.12-201ENST00000516329 A0A087X1B8 175 aa4.36□□□□□ -1.71
SNORA40.12-201ENST00000516329 CENPVL1A0A0U1RR11 272 aa4.36□□□□□ -1.71
SNORA40.12-201ENST00000516329 UNC119BA6NIH7 251 aa4.36□□□□□ -1.71
SNORA40.12-201ENST00000516329 K7ESF4 209 aa4.36□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms