RNA–Protein interactions for RNA: ENST00000515881.5

DDR1-280, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 3

Gene DDR1, Length 956 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-280ENST00000515881 TNFSF13BQ9Y275 285 aa21.52■■□□□ 1.04
DDR1-280ENST00000515881 HCN4Q9Y3Q4 1203 aa21.52■■□□□ 1.04
DDR1-280ENST00000515881 WEE2P0C1S8 567 aa21.51■■□□□ 1.03
DDR1-280ENST00000515881 HSP90AA2PQ14568 343 aaPredicted RBP21.51■■□□□ 1.03
DDR1-280ENST00000515881 TMEM119Q4V9L6 283 aa21.51■■□□□ 1.03
DDR1-280ENST00000515881 APBB1IPQ7Z5R6 666 aaPredicted RBP21.51■■□□□ 1.03
DDR1-280ENST00000515881 SYT2Q8N9I0 419 aaPredicted RBP21.51■■□□□ 1.03
DDR1-280ENST00000515881 EDAQ92838 391 aa21.51■■□□□ 1.03
DDR1-280ENST00000515881 CDK5RAP3Q96JB5 506 aa21.51■■□□□ 1.03
DDR1-280ENST00000515881 AK8Q96MA6 479 aa21.51■■□□□ 1.03
DDR1-280ENST00000515881 PAAF1Q9BRP4 392 aa21.51■■□□□ 1.03
DDR1-280ENST00000515881 GPR62Q9BZJ7 368 aa21.51■■□□□ 1.03
DDR1-280ENST00000515881 CXCL16Q9H2A7 254 aa21.51■■□□□ 1.03
DDR1-280ENST00000515881 TMEM134Q9H6X4 195 aa21.51■■□□□ 1.03
DDR1-280ENST00000515881 RXFP1Q9HBX9 757 aa21.51■■□□□ 1.03
DDR1-280ENST00000515881 KMT5AQ9NQR1 393 aa21.51■■□□□ 1.03
DDR1-280ENST00000515881 GDAQ9Y2T3 454 aa21.51■■□□□ 1.03
DDR1-280ENST00000515881 RBM19Q9Y4C8 960 aaKnown RBP21.51■■□□□ 1.03
DDR1-280ENST00000515881 CASTOR2A6NHX0 329 aa21.5■■□□□ 1.03
DDR1-280ENST00000515881 TEX28O15482 410 aa21.5■■□□□ 1.03
DDR1-280ENST00000515881 BMP15O95972 392 aa21.5■■□□□ 1.03
DDR1-280ENST00000515881 THP07101 528 aa21.5■■□□□ 1.03
DDR1-280ENST00000515881 ADH1AP07327 375 aa21.5■■□□□ 1.03
DDR1-280ENST00000515881 SP100P23497 879 aaPredicted RBP21.5■■□□□ 1.03
DDR1-280ENST00000515881 NAB2Q15742 525 aa21.5■■□□□ 1.03
DDR1-280ENST00000515881 ATAT1Q5SQI0 421 aa21.5■■□□□ 1.03
DDR1-280ENST00000515881 TAS1R3Q7RTX0 852 aa21.5■■□□□ 1.03
DDR1-280ENST00000515881 B3GALT6Q96L58 329 aa21.5■■□□□ 1.03
DDR1-280ENST00000515881 MRPL4Q9BYD3 311 aaKnown RBP21.5■■□□□ 1.03
DDR1-280ENST00000515881 BACH2Q9BYV9 841 aa21.5■■□□□ 1.03
DDR1-280ENST00000515881 TSHZ2Q9NRE2 1034 aa21.5■■□□□ 1.03
DDR1-280ENST00000515881 NR2E1Q9Y466 385 aa21.5■■□□□ 1.03
DDR1-280ENST00000515881 VPS37CA5D8V6 355 aaPredicted RBP21.49■■□□□ 1.03
DDR1-280ENST00000515881 SPDYE4A6NLX3 237 aa21.49■■□□□ 1.03
DDR1-280ENST00000515881 SFI1A8K8P3 1242 aa21.49■■□□□ 1.03
DDR1-280ENST00000515881 SLC26A4O43511 780 aa21.49■■□□□ 1.03
DDR1-280ENST00000515881 TADA2AO75478 443 aa21.49■■□□□ 1.03
DDR1-280ENST00000515881 PLA2G4BP0C869 781 aa21.49■■□□□ 1.03
DDR1-280ENST00000515881 PDCP20941 246 aa21.49■■□□□ 1.03
DDR1-280ENST00000515881 SLC12A3P55017 1021 aa21.49■■□□□ 1.03
DDR1-280ENST00000515881 RAD51AP2Q09MP3 1159 aa21.49■■□□□ 1.03
DDR1-280ENST00000515881 USP41Q3LFD5 358 aa21.49■■□□□ 1.03
DDR1-280ENST00000515881 TMC5Q6UXY8 1006 aa21.49■■□□□ 1.03
DDR1-280ENST00000515881 GPR65Q8IYL9 337 aa21.49■■□□□ 1.03
DDR1-280ENST00000515881 ACO2Q99798 780 aaKnown RBP21.49■■□□□ 1.03
DDR1-280ENST00000515881 NTPCRQ9BSD7 190 aaKnown RBP21.49■■□□□ 1.03
DDR1-280ENST00000515881 KCND2Q9NZV8 630 aa21.49■■□□□ 1.03
DDR1-280ENST00000515881 SF3B1O75533 1304 aaKnown RBP eCLIP21.49■■□□□ 1.038e-6■■■■■ 107
DDR1-280ENST00000515881 SLC16A4O15374 487 aa21.48■■□□□ 1.03
DDR1-280ENST00000515881 KIF4AO95239 1232 aa21.48■■□□□ 1.03
DDR1-280ENST00000515881 PLS3P13797 630 aa21.48■■□□□ 1.03
DDR1-280ENST00000515881 ZXDAP98168 799 aa21.48■■□□□ 1.03
DDR1-280ENST00000515881 ZNF568Q3ZCX4 644 aa21.48■■□□□ 1.03
DDR1-280ENST00000515881 GPR149Q86SP6 731 aa21.48■■□□□ 1.03
DDR1-280ENST00000515881 SPIRE2Q8WWL2 714 aa21.48■■□□□ 1.03
DDR1-280ENST00000515881 TARS2Q9BW92 718 aaKnown RBP21.48■■□□□ 1.03
DDR1-280ENST00000515881 CDT1Q9H211 546 aa21.48■■□□□ 1.03
DDR1-280ENST00000515881 PTPRHQ9HD43 1115 aa21.48■■□□□ 1.03
DDR1-280ENST00000515881 C2CD4DB7Z1M9 353 aa21.47■■□□□ 1.03
DDR1-280ENST00000515881 GLUD1P00367 558 aa21.47■■□□□ 1.03
DDR1-280ENST00000515881 UBA7P41226 1012 aa21.47■■□□□ 1.03
DDR1-280ENST00000515881 GRM5P41594 1212 aa21.47■■□□□ 1.03
DDR1-280ENST00000515881 SF3A1Q15459 793 aaKnown RBP21.47■■□□□ 1.03
DDR1-280ENST00000515881 FEZF2Q8TBJ5 459 aa21.47■■□□□ 1.03
DDR1-280ENST00000515881 HASPINQ8TF76 798 aa21.47■■□□□ 1.03
DDR1-280ENST00000515881 RIN2Q8WYP3 895 aaPredicted RBP21.47■■□□□ 1.03
DDR1-280ENST00000515881 CALML4Q96GE6 196 aa21.47■■□□□ 1.03
DDR1-280ENST00000515881 MAN1C1Q9NR34 630 aa21.47■■□□□ 1.03
DDR1-280ENST00000515881 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP21.47■■□□□ 1.03
DDR1-280ENST00000515881 KCNG1Q9UIX4 513 aa21.47■■□□□ 1.03
DDR1-280ENST00000515881 C5orf42Q9H799 3197 aa21.46■■□□□ 1.03
DDR1-280ENST00000515881 LONP1P36776 959 aaKnown RBP21.46■■□□□ 1.03
DDR1-280ENST00000515881 CREMQ03060 361 aa21.46■■□□□ 1.03
DDR1-280ENST00000515881 PTPN21Q16825 1174 aa21.46■■□□□ 1.03
DDR1-280ENST00000515881 GLRA4Q5JXX5 417 aa21.46■■□□□ 1.03
DDR1-280ENST00000515881 ELMSAN1Q6PJG2 1045 aa21.46■■□□□ 1.03
DDR1-280ENST00000515881 TRIM67Q6ZTA4 783 aa21.46■■□□□ 1.03
DDR1-280ENST00000515881 HFE2Q6ZVN8 426 aa21.46■■□□□ 1.03
DDR1-280ENST00000515881 CEP120Q8N960 986 aa21.46■■□□□ 1.03
DDR1-280ENST00000515881 PPP1R10Q96QC0 940 aaKnown RBP21.46■■□□□ 1.03
DDR1-280ENST00000515881 CCDC94Q9BW85 323 aaPredicted RBP21.46■■□□□ 1.03
DDR1-280ENST00000515881 FNIP2Q9P278 1114 aa21.46■■□□□ 1.03
DDR1-280ENST00000515881 DPP7Q9UHL4 492 aa21.46■■□□□ 1.03
DDR1-280ENST00000515881 ARIH1Q9Y4X5 557 aaPredicted RBP21.46■■□□□ 1.03
DDR1-280ENST00000515881 NPHP3-ACAD11A0A0J9YXS1 232 aa21.45■■□□□ 1.02
DDR1-280ENST00000515881 ABLIM1O14639 778 aa21.45■■□□□ 1.02
DDR1-280ENST00000515881 C1RP00736 705 aa21.45■■□□□ 1.02
DDR1-280ENST00000515881 MCF2P10911 925 aa21.45■■□□□ 1.02
DDR1-280ENST00000515881 PROZP22891 400 aa21.45■■□□□ 1.02
DDR1-280ENST00000515881 SMTNP53814 917 aa21.45■■□□□ 1.02
DDR1-280ENST00000515881 YARSP54577 528 aaKnown RBP21.45■■□□□ 1.02
DDR1-280ENST00000515881 GRIN1Q05586 938 aa21.45■■□□□ 1.02
DDR1-280ENST00000515881 STRN3Q13033 797 aa21.45■■□□□ 1.02
DDR1-280ENST00000515881 ARSHQ5FYA8 562 aa21.45■■□□□ 1.02
DDR1-280ENST00000515881 RTP2Q5QGT7 225 aa21.45■■□□□ 1.02
DDR1-280ENST00000515881 MPZL3Q6UWV2 235 aa21.45■■□□□ 1.02
DDR1-280ENST00000515881 C15orf39Q6ZRI6 1047 aa21.45■■□□□ 1.02
DDR1-280ENST00000515881 ZBTB33Q86T24 672 aa21.45■■□□□ 1.02
DDR1-280ENST00000515881 TDRD5Q8NAT2 981 aaKnown RBP21.45■■□□□ 1.02
DDR1-280ENST00000515881 TMEM161BQ8NDZ6 487 aa21.45■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms