RNA–Protein interactions for RNA: ENST00000515776.1

HMGCR-213, Transcript of 3-hydroxy-3-methylglutaryl-CoA reductase, humanhuman

TSL 2

Gene HMGCR, Length 501 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCR-213ENST00000515776 ARHGEF4Q9NR80 690 aa4.39□□□□□ -1.71
HMGCR-213ENST00000515776 ARGLU1Q9NWB6 273 aaPredicted RBP4.39□□□□□ -1.71
HMGCR-213ENST00000515776 UBAP1Q9NZ09 502 aa4.39□□□□□ -1.71
HMGCR-213ENST00000515776 HDAC6Q9UBN7 1215 aa4.39□□□□□ -1.71
HMGCR-213ENST00000515776 FBXO9Q9UK97 447 aaPredicted RBP4.39□□□□□ -1.71
HMGCR-213ENST00000515776 OAZ3Q9UMX2 235 aa4.39□□□□□ -1.71
HMGCR-213ENST00000515776 SHROOM2Q13796 1616 aa4.39□□□□□ -1.71
HMGCR-213ENST00000515776 ASXL2Q76L83 1435 aa4.38□□□□□ -1.71
HMGCR-213ENST00000515776 FRMD3A2A2Y4 597 aa4.38□□□□□ -1.71
HMGCR-213ENST00000515776 GOLGA6L19H0YKK7 550 aa4.38□□□□□ -1.71
HMGCR-213ENST00000515776 AP5Z1O43299 807 aa4.38□□□□□ -1.71
HMGCR-213ENST00000515776 NARSO43776 548 aaKnown RBP4.38□□□□□ -1.71
HMGCR-213ENST00000515776 ZEB2O60315 1214 aa4.38□□□□□ -1.71
HMGCR-213ENST00000515776 CUTAO60888 179 aa4.38□□□□□ -1.71
HMGCR-213ENST00000515776 SEC31AO94979 1220 aaKnown RBP4.38□□□□□ -1.71
HMGCR-213ENST00000515776 ZNF202O95125 648 aa4.38□□□□□ -1.71
HMGCR-213ENST00000515776 FERP16591 822 aa4.38□□□□□ -1.71
HMGCR-213ENST00000515776 ABHD18Q0P651 414 aa4.38□□□□□ -1.71
HMGCR-213ENST00000515776 TOP3AQ13472 1001 aaPredicted RBP4.38□□□□□ -1.71
HMGCR-213ENST00000515776 GNL2Q13823 731 aaKnown RBP4.38□□□□□ -1.71
HMGCR-213ENST00000515776 DDR2Q16832 855 aa4.38□□□□□ -1.71
HMGCR-213ENST00000515776 TPD52L1Q16890 204 aaPredicted RBP4.38□□□□□ -1.71
HMGCR-213ENST00000515776 ERCC6LQ2NKX8 1250 aa4.38□□□□□ -1.71
HMGCR-213ENST00000515776 SLC4A8Q2Y0W8 1093 aa4.38□□□□□ -1.71
HMGCR-213ENST00000515776 LSM12Q3MHD2 195 aaKnown RBP4.38□□□□□ -1.71
HMGCR-213ENST00000515776 CCDC93Q567U6 631 aa4.38□□□□□ -1.71
HMGCR-213ENST00000515776 VPS53Q5VIR6 699 aa4.38□□□□□ -1.71
HMGCR-213ENST00000515776 BTBD8Q5XKL5 378 aa4.38□□□□□ -1.71
HMGCR-213ENST00000515776 MIS18BP1Q6P0N0 1132 aa4.38□□□□□ -1.71
HMGCR-213ENST00000515776 SLC30A9Q6PML9 568 aa4.38□□□□□ -1.71
HMGCR-213ENST00000515776 DPP8Q6V1X1 898 aaPredicted RBP4.38□□□□□ -1.71
HMGCR-213ENST00000515776 SLC7A5P1Q8MH63 180 aa4.38□□□□□ -1.71
HMGCR-213ENST00000515776 SLC43A3Q8NBI5 491 aa4.38□□□□□ -1.71
HMGCR-213ENST00000515776 CCDC150Q8NCX0 1101 aa4.38□□□□□ -1.71
HMGCR-213ENST00000515776 PUM2Q8TB72 1066 aaKnown RBP eCLIP4.38□□□□□ -1.71
HMGCR-213ENST00000515776 MAGEC3Q8TD91 643 aa4.38□□□□□ -1.71
HMGCR-213ENST00000515776 NUP133Q8WUM0 1156 aa4.38□□□□□ -1.71
HMGCR-213ENST00000515776 CUL5Q93034 780 aa4.38□□□□□ -1.71
HMGCR-213ENST00000515776 CCDC47Q96A33 483 aaKnown RBP4.38□□□□□ -1.71
HMGCR-213ENST00000515776 CHFRQ96EP1 664 aa4.38□□□□□ -1.71
HMGCR-213ENST00000515776 DTNBP1Q96EV8 351 aa4.38□□□□□ -1.71
HMGCR-213ENST00000515776 DPYSL5Q9BPU6 564 aa4.38□□□□□ -1.71
HMGCR-213ENST00000515776 STK31Q9BXU1 1019 aa4.38□□□□□ -1.71
HMGCR-213ENST00000515776 C12orf65Q9H3J6 166 aaKnown RBP4.38□□□□□ -1.71
HMGCR-213ENST00000515776 INCENPQ9NQS7 918 aa4.38□□□□□ -1.71
HMGCR-213ENST00000515776 C11orf21Q9P2W6 132 aa4.38□□□□□ -1.71
HMGCR-213ENST00000515776 ORC3Q9UBD5 711 aaPredicted RBP4.38□□□□□ -1.71
HMGCR-213ENST00000515776 TUBGCP4Q9UGJ1 667 aa4.38□□□□□ -1.71
HMGCR-213ENST00000515776 DDX20Q9UHI6 824 aaKnown RBP4.38□□□□□ -1.71
HMGCR-213ENST00000515776 SPO11Q9Y5K1 396 aa4.38□□□□□ -1.71
HMGCR-213ENST00000515776 THOC2Q8NI27 1593 aaKnown RBP4.38□□□□□ -1.71
HMGCR-213ENST00000515776 ELP1O95163 1332 aa4.38□□□□□ -1.71
HMGCR-213ENST00000515776 CCDC171Q6TFL3 1326 aa4.38□□□□□ -1.71
HMGCR-213ENST00000515776 EVC2Q86UK5 1308 aa4.38□□□□□ -1.71
HMGCR-213ENST00000515776 INSRP06213 1382 aa4.38□□□□□ -1.71
HMGCR-213ENST00000515776 GPRASP1Q5JY77 1395 aa4.38□□□□□ -1.71
HMGCR-213ENST00000515776 SOGA1O94964 1423 aa4.38□□□□□ -1.71
HMGCR-213ENST00000515776 PTPRGP23470 1445 aa4.38□□□□□ -1.71
HMGCR-213ENST00000515776 KIF27Q86VH2 1401 aa4.38□□□□□ -1.71
HMGCR-213ENST00000515776 PLEKHH2Q8IVE3 1493 aa4.37□□□□□ -1.71
HMGCR-213ENST00000515776 CECR2Q9BXF3 1484 aa4.37□□□□□ -1.71
HMGCR-213ENST00000515776 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP4.37□□□□□ -1.71
HMGCR-213ENST00000515776 ERICH2A1L162 156 aa4.37□□□□□ -1.71
HMGCR-213ENST00000515776 IQCA1LA6NCM1 817 aa4.37□□□□□ -1.71
HMGCR-213ENST00000515776 FAM90A27PA6NNH2 459 aa4.37□□□□□ -1.71
HMGCR-213ENST00000515776 MATN2O00339 956 aa4.37□□□□□ -1.71
HMGCR-213ENST00000515776 CDC14BO60729 498 aa4.37□□□□□ -1.71
HMGCR-213ENST00000515776 CAVIN2O95810 425 aa4.37□□□□□ -1.71
HMGCR-213ENST00000515776 RPSAP08865 295 aaKnown RBP4.37□□□□□ -1.71
HMGCR-213ENST00000515776 VIL1P09327 827 aaKnown RBP4.37□□□□□ -1.71
HMGCR-213ENST00000515776 CASTP20810 708 aaKnown RBP4.37□□□□□ -1.71
HMGCR-213ENST00000515776 PTGS1P23219 599 aa4.37□□□□□ -1.71
HMGCR-213ENST00000515776 YY1P25490 414 aa4.37□□□□□ -1.71
HMGCR-213ENST00000515776 PAPOLAP51003 745 aaKnown RBP4.37□□□□□ -1.71
HMGCR-213ENST00000515776 ZNF132P52740 706 aa4.37□□□□□ -1.71
HMGCR-213ENST00000515776 PTH1RQ03431 593 aa4.37□□□□□ -1.71
HMGCR-213ENST00000515776 IFRD2Q12894 506 aaPredicted RBP4.37□□□□□ -1.71
HMGCR-213ENST00000515776 TBR1Q16650 682 aa4.37□□□□□ -1.71
HMGCR-213ENST00000515776 ARHGAP29Q52LW3 1261 aa4.37□□□□□ -1.71
HMGCR-213ENST00000515776 ZMAT1Q5H9K5 638 aa4.37□□□□□ -1.71
HMGCR-213ENST00000515776 YOD1Q5VVQ6 348 aaPredicted RBP4.37□□□□□ -1.71
HMGCR-213ENST00000515776 FAAH2Q6GMR7 532 aa4.37□□□□□ -1.71
HMGCR-213ENST00000515776 CAPRIN2Q6IMN6 1127 aaKnown RBP4.37□□□□□ -1.71
HMGCR-213ENST00000515776 CC2D1AQ6P1N0 951 aaPredicted RBP4.37□□□□□ -1.71
HMGCR-213ENST00000515776 ANKS3Q6ZW76 656 aa4.37□□□□□ -1.71
HMGCR-213ENST00000515776 POLNQ7Z5Q5 900 aa4.37□□□□□ -1.71
HMGCR-213ENST00000515776 HOOK3Q86VS8 718 aa4.37□□□□□ -1.71
HMGCR-213ENST00000515776 MCF2L2Q86YR7 1114 aa4.37□□□□□ -1.71
HMGCR-213ENST00000515776 C1orf210Q8IVY1 113 aa4.37□□□□□ -1.71
HMGCR-213ENST00000515776 KIRREL3Q8IZU9 778 aa4.37□□□□□ -1.71
HMGCR-213ENST00000515776 CLASRPQ8N2M8 674 aaKnown RBP4.37□□□□□ -1.71
HMGCR-213ENST00000515776 GIMAP1Q8WWP7 306 aa4.37□□□□□ -1.71
HMGCR-213ENST00000515776 CLIP3Q96DZ5 547 aa4.37□□□□□ -1.71
HMGCR-213ENST00000515776 OR14A2Q96R54 314 aa4.37□□□□□ -1.71
HMGCR-213ENST00000515776 SLC39A3Q9BRY0 314 aa4.37□□□□□ -1.71
HMGCR-213ENST00000515776 ALG1Q9BT22 464 aa4.37□□□□□ -1.71
HMGCR-213ENST00000515776 CENPOQ9BU64 300 aa4.37□□□□□ -1.71
HMGCR-213ENST00000515776 FUT8Q9BYC5 575 aa4.37□□□□□ -1.71
HMGCR-213ENST00000515776 SLC7A5P2Q9GIP4 190 aa4.37□□□□□ -1.71
HMGCR-213ENST00000515776 IFT57Q9NWB7 429 aa4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms