RNA–Protein interactions for RNA: ENST00000515753.1

HERC4-215, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 2

Gene HERC4, Length 589 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-215ENST00000515753 METTL24Q5JXM2 366 aa4.44□□□□□ -1.7
HERC4-215ENST00000515753 DDX42Q86XP3 938 aaKnown RBP eCLIP4.44□□□□□ -1.7
HERC4-215ENST00000515753 ADGRG3Q86Y34 549 aa4.44□□□□□ -1.7
HERC4-215ENST00000515753 ATL2Q8NHH9 583 aa4.44□□□□□ -1.7
HERC4-215ENST00000515753 TSPEARQ8WU66 669 aa4.44□□□□□ -1.7
HERC4-215ENST00000515753 EAF2Q96CJ1 260 aaPredicted RBP4.44□□□□□ -1.7
HERC4-215ENST00000515753 AHCYL2Q96HN2 611 aaKnown RBP4.44□□□□□ -1.7
HERC4-215ENST00000515753 NAF1Q96HR8 494 aaKnown RBP4.44□□□□□ -1.7
HERC4-215ENST00000515753 PDCD2LQ9BRP1 358 aa4.44□□□□□ -1.7
HERC4-215ENST00000515753 CPEB1Q9BZB8 566 aaKnown RBP4.44□□□□□ -1.7
HERC4-215ENST00000515753 TOR3AQ9H497 397 aa4.44□□□□□ -1.7
HERC4-215ENST00000515753 VTA1Q9NP79 307 aa4.44□□□□□ -1.7
HERC4-215ENST00000515753 SCOCQ9UIL1 159 aa4.44□□□□□ -1.7
HERC4-215ENST00000515753 LPLP06858 475 aa4.43□□□□□ -1.7
HERC4-215ENST00000515753 GYPEP15421 78 aa4.43□□□□□ -1.7
HERC4-215ENST00000515753 ZNF37AP17032 561 aaPredicted RBP4.43□□□□□ -1.7
HERC4-215ENST00000515753 GPR3P46089 330 aa4.43□□□□□ -1.7
HERC4-215ENST00000515753 MTNR1BP49286 362 aa4.43□□□□□ -1.7
HERC4-215ENST00000515753 CLK3P49761 638 aaKnown RBP4.43□□□□□ -1.7
HERC4-215ENST00000515753 C21orf58P58505 322 aa4.43□□□□□ -1.7
HERC4-215ENST00000515753 AMPD3Q01432 767 aa4.43□□□□□ -1.7
HERC4-215ENST00000515753 INAVAQ3KP66 663 aa4.43□□□□□ -1.7
HERC4-215ENST00000515753 STRIP1Q5VSL9 837 aa4.43□□□□□ -1.7
HERC4-215ENST00000515753 Q6YL49 198 aa4.43□□□□□ -1.7
HERC4-215ENST00000515753 PRIMA1Q86XR5 153 aa4.43□□□□□ -1.7
HERC4-215ENST00000515753 XYLT1Q86Y38 959 aa4.43□□□□□ -1.7
HERC4-215ENST00000515753 MSL3Q8N5Y2 521 aaKnown RBP4.43□□□□□ -1.7
HERC4-215ENST00000515753 OR5M3Q8NGP4 307 aa4.43□□□□□ -1.7
HERC4-215ENST00000515753 SNX33Q8WV41 574 aa4.43□□□□□ -1.7
HERC4-215ENST00000515753 WDR11Q9BZH6 1224 aa4.43□□□□□ -1.7
HERC4-215ENST00000515753 KCNH6Q9H252 994 aa4.43□□□□□ -1.7
HERC4-215ENST00000515753 ZNF277Q9NRM2 450 aaPredicted RBP4.43□□□□□ -1.7
HERC4-215ENST00000515753 ADARB2Q9NS39 739 aaKnown RBP4.43□□□□□ -1.7
HERC4-215ENST00000515753 CCM2LQ9NUG4 571 aaPredicted RBP4.43□□□□□ -1.7
HERC4-215ENST00000515753 C14orf119Q9NWQ9 140 aa4.43□□□□□ -1.7
HERC4-215ENST00000515753 TRPM5Q9NZQ8 1165 aa4.43□□□□□ -1.7
HERC4-215ENST00000515753 ABCC9O60706 1549 aa4.42□□□□□ -1.7
HERC4-215ENST00000515753 TRIM24O15164 1050 aa4.42□□□□□ -1.7
HERC4-215ENST00000515753 PHF2O75151 1096 aa4.42□□□□□ -1.7
HERC4-215ENST00000515753 GASTP01350 101 aa4.42□□□□□ -1.7
HERC4-215ENST00000515753 ZEB1P37275 1124 aaPredicted RBP4.42□□□□□ -1.7
HERC4-215ENST00000515753 KLF1Q13351 362 aaPredicted RBP4.42□□□□□ -1.7
HERC4-215ENST00000515753 ADRM1Q16186 407 aa4.42□□□□□ -1.7
HERC4-215ENST00000515753 MST1LQ2TV78 715 aa4.42□□□□□ -1.7
HERC4-215ENST00000515753 ZKSCAN2Q63HK3 967 aa4.42□□□□□ -1.7
HERC4-215ENST00000515753 BTNL9Q6UXG8 535 aa4.42□□□□□ -1.7
HERC4-215ENST00000515753 DOK3Q7L591 496 aa4.42□□□□□ -1.7
HERC4-215ENST00000515753 LILRA3Q8N6C8 439 aaPredicted RBP4.42□□□□□ -1.7
HERC4-215ENST00000515753 COG1Q8WTW3 980 aa4.42□□□□□ -1.7
HERC4-215ENST00000515753 ZNF480Q8WV37 535 aa4.42□□□□□ -1.7
HERC4-215ENST00000515753 LSM14BQ9BX40 385 aaKnown RBP4.42□□□□□ -1.7
HERC4-215ENST00000515753 SERHL2Q9H4I8 314 aa4.42□□□□□ -1.7
HERC4-215ENST00000515753 SLC5A4Q9NY91 659 aa4.42□□□□□ -1.7
HERC4-215ENST00000515753 WASHC2AQ641Q2 1341 aa4.42□□□□□ -1.7
HERC4-215ENST00000515753 GOLGA8AA7E2F4 631 aa4.41□□□□□ -1.7
HERC4-215ENST00000515753 ALG1L2C9J202 215 aa4.41□□□□□ -1.7
HERC4-215ENST00000515753 LEFTY2O00292 366 aa4.41□□□□□ -1.7
HERC4-215ENST00000515753 PPFIA4O75335 1185 aa4.41□□□□□ -1.7
HERC4-215ENST00000515753 NCR1O76036 304 aa4.41□□□□□ -1.7
HERC4-215ENST00000515753 CTSSP25774 331 aa4.41□□□□□ -1.7
HERC4-215ENST00000515753 CRHR1P34998 444 aa4.41□□□□□ -1.7
HERC4-215ENST00000515753 SLC5A3P53794 718 aa4.41□□□□□ -1.7
HERC4-215ENST00000515753 DUSP2Q05923 314 aa4.41□□□□□ -1.7
HERC4-215ENST00000515753 MRPL49Q13405 166 aaKnown RBP4.41□□□□□ -1.7
HERC4-215ENST00000515753 UBE3CQ15386 1083 aa4.41□□□□□ -1.7
HERC4-215ENST00000515753 VPS72Q15906 364 aa4.41□□□□□ -1.7
HERC4-215ENST00000515753 FAM83AQ86UY5 434 aa4.41□□□□□ -1.7
HERC4-215ENST00000515753 CMTR2Q8IYT2 770 aaKnown RBP4.41□□□□□ -1.7
HERC4-215ENST00000515753 CBARPQ8N350 705 aaPredicted RBP4.41□□□□□ -1.7
HERC4-215ENST00000515753 CNTD1Q8N815 330 aa4.41□□□□□ -1.7
HERC4-215ENST00000515753 GLB1L3Q8NCI6 653 aaPredicted RBP4.41□□□□□ -1.7
HERC4-215ENST00000515753 OR52N2Q8NGI0 321 aa4.41□□□□□ -1.7
HERC4-215ENST00000515753 ZCRB1Q8TBF4 217 aaKnown RBP4.41□□□□□ -1.7
HERC4-215ENST00000515753 MYEOVQ96EZ4 313 aa4.41□□□□□ -1.7
HERC4-215ENST00000515753 IL17RAQ96F46 866 aa4.41□□□□□ -1.7
HERC4-215ENST00000515753 NDC1Q9BTX1 674 aa4.41□□□□□ -1.7
HERC4-215ENST00000515753 TEX101Q9BY14 249 aa4.41□□□□□ -1.7
HERC4-215ENST00000515753 PRDM13Q9H4Q3 707 aa4.41□□□□□ -1.7
HERC4-215ENST00000515753 IFT122Q9HBG6 1241 aa4.41□□□□□ -1.7
HERC4-215ENST00000515753 DPP7Q9UHL4 492 aa4.41□□□□□ -1.7
HERC4-215ENST00000515753 HDAC5Q9UQL6 1122 aa4.41□□□□□ -1.7
HERC4-215ENST00000515753 RPTORQ8N122 1335 aa4.41□□□□□ -1.7
HERC4-215ENST00000515753 PPM1GO15355 546 aaPredicted RBP4.4□□□□□ -1.71
HERC4-215ENST00000515753 NDUFA10O95299 355 aa4.4□□□□□ -1.71
HERC4-215ENST00000515753 AGXTP21549 392 aa4.4□□□□□ -1.71
HERC4-215ENST00000515753 PTH2RP49190 550 aa4.4□□□□□ -1.71
HERC4-215ENST00000515753 GZMKP49863 264 aa4.4□□□□□ -1.71
HERC4-215ENST00000515753 CDKN1CP49918 316 aaPredicted RBP4.4□□□□□ -1.71
HERC4-215ENST00000515753 USP14P54578 494 aa4.4□□□□□ -1.71
HERC4-215ENST00000515753 SCAND1P57086 179 aa4.4□□□□□ -1.71
HERC4-215ENST00000515753 MALLQ13021 153 aa4.4□□□□□ -1.71
HERC4-215ENST00000515753 LRCH2Q5VUJ6 765 aa4.4□□□□□ -1.71
HERC4-215ENST00000515753 SYCE2Q6PIF2 218 aa4.4□□□□□ -1.71
HERC4-215ENST00000515753 CMIPQ8IY22 773 aa4.4□□□□□ -1.71
HERC4-215ENST00000515753 LCORLQ8N3X6 602 aa4.4□□□□□ -1.71
HERC4-215ENST00000515753 SUPT20HQ8NEM7 779 aa4.4□□□□□ -1.71
HERC4-215ENST00000515753 HOXB13Q92826 284 aaPredicted RBP4.4□□□□□ -1.71
HERC4-215ENST00000515753 FATE1Q969F0 183 aa4.4□□□□□ -1.71
HERC4-215ENST00000515753 SLC46A2Q9BY10 475 aa4.4□□□□□ -1.71
HERC4-215ENST00000515753 QRSL1Q9H0R6 528 aaKnown RBP4.4□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms