RNA–Protein interactions for RNA: ENST00000515174.5

SNF8-214, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 2

Gene SNF8, Length 823 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-214ENST00000515174 ZNF571Q7Z3V5 609 aaPredicted RBP11.05□□□□□ -0.64
SNF8-214ENST00000515174 MTERF4Q7Z6M4 381 aaKnown RBP11.05□□□□□ -0.64
SNF8-214ENST00000515174 ZBTB8OSQ8IWT0 167 aa11.05□□□□□ -0.64
SNF8-214ENST00000515174 FBXL13Q8NEE6 735 aa11.05□□□□□ -0.64
SNF8-214ENST00000515174 ANKRD7Q92527 254 aa11.05□□□□□ -0.64
SNF8-214ENST00000515174 DHX38Q92620 1227 aaKnown RBP11.05□□□□□ -0.64
SNF8-214ENST00000515174 COPS5Q92905 334 aa11.05□□□□□ -0.64
SNF8-214ENST00000515174 SECISBP2LQ93073 1101 aaKnown RBP11.05□□□□□ -0.64
SNF8-214ENST00000515174 BICD1Q96G01 975 aa11.05□□□□□ -0.64
SNF8-214ENST00000515174 APBA2Q99767 749 aa11.05□□□□□ -0.64
SNF8-214ENST00000515174 C16orf70Q9BSU1 422 aa11.05□□□□□ -0.64
SNF8-214ENST00000515174 MRPL4Q9BYD3 311 aaKnown RBP11.05□□□□□ -0.64
SNF8-214ENST00000515174 GPR88Q9GZN0 384 aa11.05□□□□□ -0.64
SNF8-214ENST00000515174 ADAMTS1Q9UHI8 967 aa11.05□□□□□ -0.64
SNF8-214ENST00000515174 NAGPAQ9UK23 515 aa11.05□□□□□ -0.64
SNF8-214ENST00000515174 ZNF215Q9UL58 517 aaPredicted RBP11.05□□□□□ -0.64
SNF8-214ENST00000515174 GUCA1BQ9UMX6 200 aa11.05□□□□□ -0.64
SNF8-214ENST00000515174 JRKLQ9Y4A0 524 aa11.05□□□□□ -0.64
SNF8-214ENST00000515174 A0A087X0T9 212 aa11.04□□□□□ -0.64
SNF8-214ENST00000515174 RRN3P2A6NIE6 340 aa11.04□□□□□ -0.64
SNF8-214ENST00000515174 A6NJR5 290 aa11.04□□□□□ -0.64
SNF8-214ENST00000515174 ACKR2O00590 384 aa11.04□□□□□ -0.64
SNF8-214ENST00000515174 C22orf31O95567 290 aa11.04□□□□□ -0.64
SNF8-214ENST00000515174 C4BPAP04003 597 aaKnown RBP11.04□□□□□ -0.64
SNF8-214ENST00000515174 FAM228BP0C875 321 aa11.04□□□□□ -0.64
SNF8-214ENST00000515174 INSRRP14616 1297 aa11.04□□□□□ -0.64
SNF8-214ENST00000515174 PROZP22891 400 aa11.04□□□□□ -0.64
SNF8-214ENST00000515174 GCLMP48507 274 aa11.04□□□□□ -0.64
SNF8-214ENST00000515174 MFAP3P55082 362 aa11.04□□□□□ -0.64
SNF8-214ENST00000515174 FCGRTP55899 365 aa11.04□□□□□ -0.64
SNF8-214ENST00000515174 APBA1Q02410 837 aa11.04□□□□□ -0.64
SNF8-214ENST00000515174 GCNT1Q02742 428 aa11.04□□□□□ -0.64
SNF8-214ENST00000515174 GFPT1Q06210 699 aaPredicted RBP11.04□□□□□ -0.64
SNF8-214ENST00000515174 MCL1Q07820 350 aa11.04□□□□□ -0.64
SNF8-214ENST00000515174 TCEAL1Q15170 157 aa11.04□□□□□ -0.64
SNF8-214ENST00000515174 CCL14Q16627 93 aa11.04□□□□□ -0.64
SNF8-214ENST00000515174 MAPK6Q16659 721 aa11.04□□□□□ -0.64
SNF8-214ENST00000515174 ZACNQ401N2 412 aa11.04□□□□□ -0.64
SNF8-214ENST00000515174 CRELD2Q6UXH1 353 aaPredicted RBP11.04□□□□□ -0.64
SNF8-214ENST00000515174 TSHZ1Q6ZSZ6 1077 aa11.04□□□□□ -0.64
SNF8-214ENST00000515174 SV2AQ7L0J3 742 aa11.04□□□□□ -0.64
SNF8-214ENST00000515174 TRAPPC11Q7Z392 1133 aa11.04□□□□□ -0.64
SNF8-214ENST00000515174 FAM71AQ8IYT1 594 aa11.04□□□□□ -0.64
SNF8-214ENST00000515174 ZNF710Q8N1W2 664 aa11.04□□□□□ -0.64
SNF8-214ENST00000515174 CEP112Q8N8E3 955 aa11.04□□□□□ -0.64
SNF8-214ENST00000515174 ZSWIM2Q8NEG5 633 aa11.04□□□□□ -0.64
SNF8-214ENST00000515174 AFG1LQ8WV93 481 aa11.04□□□□□ -0.64
SNF8-214ENST00000515174 SOCS4Q8WXH5 440 aa11.04□□□□□ -0.64
SNF8-214ENST00000515174 ACO2Q99798 780 aaKnown RBP11.04□□□□□ -0.64
SNF8-214ENST00000515174 RNPEPQ9H4A4 650 aa11.04□□□□□ -0.64
SNF8-214ENST00000515174 PTPRHQ9HD43 1115 aa11.04□□□□□ -0.64
SNF8-214ENST00000515174 RAB20Q9NX57 234 aa11.04□□□□□ -0.64
SNF8-214ENST00000515174 FLRT1Q9NZU1 646 aa11.04□□□□□ -0.64
SNF8-214ENST00000515174 SUCLA2Q9P2R7 463 aaPredicted RBP11.04□□□□□ -0.64
SNF8-214ENST00000515174 GJD2Q9UKL4 321 aa11.04□□□□□ -0.64
SNF8-214ENST00000515174 GOLGA8IPA6NC78 632 aa11.03□□□□□ -0.64
SNF8-214ENST00000515174 GOLGA8JA6NMD2 632 aa11.03□□□□□ -0.64
SNF8-214ENST00000515174 H3BRB1 525 aa11.03□□□□□ -0.64
SNF8-214ENST00000515174 FOXN3O00409 490 aaPredicted RBP11.03□□□□□ -0.64
SNF8-214ENST00000515174 ABLIM1O14639 778 aa11.03□□□□□ -0.64
SNF8-214ENST00000515174 CLDN3O15551 220 aa11.03□□□□□ -0.64
SNF8-214ENST00000515174 TADA3O75528 432 aa11.03□□□□□ -0.64
SNF8-214ENST00000515174 TFRCP02786 760 aaKnown RBP11.03□□□□□ -0.64
SNF8-214ENST00000515174 GZMAP12544 262 aa11.03□□□□□ -0.64
SNF8-214ENST00000515174 SMPD1P17405 629 aa11.03□□□□□ -0.64
SNF8-214ENST00000515174 CYP2B6P20813 491 aa11.03□□□□□ -0.64
SNF8-214ENST00000515174 TMOD1P28289 359 aa11.03□□□□□ -0.64
SNF8-214ENST00000515174 RGS2P41220 211 aa11.03□□□□□ -0.64
SNF8-214ENST00000515174 ADCYAP1R1P41586 468 aa11.03□□□□□ -0.64
SNF8-214ENST00000515174 PRKCZQ05513 592 aa11.03□□□□□ -0.64
SNF8-214ENST00000515174 PRPF4BQ13523 1007 aaKnown RBP11.03□□□□□ -0.64
SNF8-214ENST00000515174 PCBP1Q15365 356 aaKnown RBP eCLIP11.03□□□□□ -0.64
SNF8-214ENST00000515174 IFI16Q16666 785 aaKnown RBP11.03□□□□□ -0.64
SNF8-214ENST00000515174 DGKDQ16760 1214 aa11.03□□□□□ -0.64
SNF8-214ENST00000515174 KYAT1Q16773 422 aa11.03□□□□□ -0.64
SNF8-214ENST00000515174 EFCAB12Q6NXP0 572 aa11.03□□□□□ -0.64
SNF8-214ENST00000515174 ALKBH5Q6P6C2 394 aaKnown RBP11.03□□□□□ -0.64
SNF8-214ENST00000515174 OLIG1Q8TAK6 271 aa11.03□□□□□ -0.64
SNF8-214ENST00000515174 HELQQ8TDG4 1101 aa11.03□□□□□ -0.64
SNF8-214ENST00000515174 U2AF1L4Q8WU68 220 aaKnown RBP11.03□□□□□ -0.64
SNF8-214ENST00000515174 SHC3Q92529 594 aa11.03□□□□□ -0.64
SNF8-214ENST00000515174 SAAL1Q96ER3 474 aa11.03□□□□□ -0.64
SNF8-214ENST00000515174 LRCH3Q96II8 777 aa11.03□□□□□ -0.64
SNF8-214ENST00000515174 FAXDC2Q96IV6 333 aa11.03□□□□□ -0.64
SNF8-214ENST00000515174 RPGRIP1Q96KN7 1286 aa11.03□□□□□ -0.64
SNF8-214ENST00000515174 NOX5Q96PH1 765 aa11.03□□□□□ -0.64
SNF8-214ENST00000515174 FNBP1Q96RU3 617 aa11.03□□□□□ -0.64
SNF8-214ENST00000515174 FAM213AQ9BRX8 229 aa11.03□□□□□ -0.64
SNF8-214ENST00000515174 TARS2Q9BW92 718 aaKnown RBP11.03□□□□□ -0.64
SNF8-214ENST00000515174 HAPLN2Q9GZV7 340 aa11.03□□□□□ -0.64
SNF8-214ENST00000515174 TUT1Q9H6E5 874 aaKnown RBP11.03□□□□□ -0.64
SNF8-214ENST00000515174 UBE2TQ9NPD8 197 aaPredicted RBP11.03□□□□□ -0.64
SNF8-214ENST00000515174 PRMT7Q9NVM4 692 aaPredicted RBP11.03□□□□□ -0.64
SNF8-214ENST00000515174 AJAP1Q9UKB5 411 aaPredicted RBP11.03□□□□□ -0.64
SNF8-214ENST00000515174 GABRQQ9UN88 632 aa11.03□□□□□ -0.64
SNF8-214ENST00000515174 TRPC6Q9Y210 931 aa11.03□□□□□ -0.64
SNF8-214ENST00000515174 GNEQ9Y223 722 aaKnown RBP11.03□□□□□ -0.64
SNF8-214ENST00000515174 PCDHGC5Q9Y5F6 944 aa11.03□□□□□ -0.64
SNF8-214ENST00000515174 CNTNAP2Q9UHC6 1331 aa11.03□□□□□ -0.64
SNF8-214ENST00000515174 CUL9Q8IWT3 2517 aa11.02□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms