RNA–Protein interactions for RNA: ENST00000514654.5

ATP2C1-222, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

TSL 1 (best)

Gene ATP2C1, Length 4,730 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-222ENST00000514654 FAM49BQ9NUQ9 324 aa6.56□□□□□ -1.36
ATP2C1-222ENST00000514654 IP6K2Q9UHH9 426 aa6.56□□□□□ -1.36
ATP2C1-222ENST00000514654 FBXL5Q9UKA1 691 aa6.56□□□□□ -1.36
ATP2C1-222ENST00000514654 PPP1R9AQ9ULJ8 1098 aa6.56□□□□□ -1.36
ATP2C1-222ENST00000514654 SALL1Q9NSC2 1324 aa6.56□□□□□ -1.36
ATP2C1-222ENST00000514654 FAM86B1E9PN63 330 aa6.56□□□□□ -1.36
ATP2C1-222ENST00000514654 GPC4O75487 556 aa6.56□□□□□ -1.36
ATP2C1-222ENST00000514654 GH1P01241 217 aa6.56□□□□□ -1.36
ATP2C1-222ENST00000514654 FAM86B2P0C5J1 330 aa6.56□□□□□ -1.36
ATP2C1-222ENST00000514654 SRGAP2BP0DMP2 458 aa6.56□□□□□ -1.36
ATP2C1-222ENST00000514654 RASSF2P50749 326 aa6.56□□□□□ -1.36
ATP2C1-222ENST00000514654 RHBDL3P58872 404 aa6.56□□□□□ -1.36
ATP2C1-222ENST00000514654 RBM43Q6ZSC3 357 aaKnown RBP6.56□□□□□ -1.36
ATP2C1-222ENST00000514654 CFAP61Q8NHU2 1237 aa6.56□□□□□ -1.36
ATP2C1-222ENST00000514654 SYTL5Q8TDW5 730 aaPredicted RBP6.56□□□□□ -1.36
ATP2C1-222ENST00000514654 SCFD2Q8WU76 684 aa6.56□□□□□ -1.36
ATP2C1-222ENST00000514654 HDAC11Q96DB2 347 aa6.56□□□□□ -1.36
ATP2C1-222ENST00000514654 ERGIC2Q96RQ1 377 aa6.56□□□□□ -1.36
ATP2C1-222ENST00000514654 ELAC2Q9BQ52 826 aaKnown RBP6.56□□□□□ -1.36
ATP2C1-222ENST00000514654 KIF9Q9HAQ2 790 aa6.56□□□□□ -1.36
ATP2C1-222ENST00000514654 RBM12Q9NTZ6 932 aaKnown RBP6.56□□□□□ -1.36
ATP2C1-222ENST00000514654 DIS3Q9Y2L1 958 aaKnown RBP6.56□□□□□ -1.36
ATP2C1-222ENST00000514654 FOXN3O00409 490 aaPredicted RBP6.56□□□□□ -1.36
ATP2C1-222ENST00000514654 KRT14P02533 472 aa6.56□□□□□ -1.36
ATP2C1-222ENST00000514654 RFX1P22670 979 aa6.56□□□□□ -1.36
ATP2C1-222ENST00000514654 HOXA10P31260 410 aaPredicted RBP6.56□□□□□ -1.36
ATP2C1-222ENST00000514654 CLCN3P51790 818 aa6.56□□□□□ -1.36
ATP2C1-222ENST00000514654 ARL4CP56559 192 aa6.56□□□□□ -1.36
ATP2C1-222ENST00000514654 ORC1Q13415 861 aa6.56□□□□□ -1.36
ATP2C1-222ENST00000514654 THOC5Q13769 683 aaKnown RBP6.56□□□□□ -1.36
ATP2C1-222ENST00000514654 NAB2Q15742 525 aa6.56□□□□□ -1.36
ATP2C1-222ENST00000514654 C6orf118Q5T5N4 469 aa6.56□□□□□ -1.36
ATP2C1-222ENST00000514654 DDX42Q86XP3 938 aaKnown RBP eCLIP6.56□□□□□ -1.36
ATP2C1-222ENST00000514654 REXO1L1PQ8IX06 675 aa6.56□□□□□ -1.36
ATP2C1-222ENST00000514654 THEM5Q8N1Q8 247 aa6.56□□□□□ -1.36
ATP2C1-222ENST00000514654 CHST13Q8NET6 341 aa6.56□□□□□ -1.36
ATP2C1-222ENST00000514654 COG1Q8WTW3 980 aa6.56□□□□□ -1.36
ATP2C1-222ENST00000514654 RIN2Q8WYP3 895 aaPredicted RBP6.56□□□□□ -1.36
ATP2C1-222ENST00000514654 TTC17Q96AE7 1141 aa6.56□□□□□ -1.36
ATP2C1-222ENST00000514654 C18orf8Q96DM3 657 aa6.56□□□□□ -1.36
ATP2C1-222ENST00000514654 WNT8AQ9H1J5 351 aa6.56□□□□□ -1.36
ATP2C1-222ENST00000514654 TAF1DQ9H5J8 278 aaPredicted RBP6.56□□□□□ -1.36
ATP2C1-222ENST00000514654 KCND2Q9NZV8 630 aa6.56□□□□□ -1.36
ATP2C1-222ENST00000514654 TLK1Q9UKI8 766 aa6.56□□□□□ -1.36
ATP2C1-222ENST00000514654 TBX20Q9UMR3 447 aa6.56□□□□□ -1.36
ATP2C1-222ENST00000514654 TACC3Q9Y6A5 838 aa6.56□□□□□ -1.36
ATP2C1-222ENST00000514654 AK9Q5TCS8 1911 aa6.56□□□□□ -1.36
ATP2C1-222ENST00000514654 TYW5A2RUC4 315 aaKnown RBP6.55□□□□□ -1.36
ATP2C1-222ENST00000514654 RASA4BC9J798 803 aa6.55□□□□□ -1.36
ATP2C1-222ENST00000514654 RASA4O43374 803 aa6.55□□□□□ -1.36
ATP2C1-222ENST00000514654 KCNJ1P48048 391 aa6.55□□□□□ -1.36
ATP2C1-222ENST00000514654 PMS2P54278 862 aa6.55□□□□□ -1.36
ATP2C1-222ENST00000514654 EIF3BP55884 814 aaKnown RBP6.55□□□□□ -1.36
ATP2C1-222ENST00000514654 NLRP11P59045 1033 aaKnown RBP6.55□□□□□ -1.36
ATP2C1-222ENST00000514654 NOP14P78316 857 aaKnown RBP6.55□□□□□ -1.36
ATP2C1-222ENST00000514654 ATF7IP2Q5U623 682 aa6.55□□□□□ -1.36
ATP2C1-222ENST00000514654 FBXO16Q8IX29 292 aaPredicted RBP6.55□□□□□ -1.36
ATP2C1-222ENST00000514654 DEPDC1BQ8WUY9 529 aa6.55□□□□□ -1.36
ATP2C1-222ENST00000514654 SCFD1Q8WVM8 642 aa6.55□□□□□ -1.36
ATP2C1-222ENST00000514654 TIPINQ9BVW5 301 aa6.55□□□□□ -1.36
ATP2C1-222ENST00000514654 MTFR1LQ9H019 292 aa6.55□□□□□ -1.36
ATP2C1-222ENST00000514654 CYP26B1Q9NR63 512 aa6.55□□□□□ -1.36
ATP2C1-222ENST00000514654 PARVAQ9NVD7 372 aa6.55□□□□□ -1.36
ATP2C1-222ENST00000514654 HMGB1P1B2RPK0 211 aaPredicted RBP6.55□□□□□ -1.36
ATP2C1-222ENST00000514654 MAFGO15525 162 aa6.55□□□□□ -1.36
ATP2C1-222ENST00000514654 AKAP3O75969 853 aa6.55□□□□□ -1.36
ATP2C1-222ENST00000514654 CYP2C9P11712 490 aa6.55□□□□□ -1.36
ATP2C1-222ENST00000514654 FGFR4P22455 802 aa6.55□□□□□ -1.36
ATP2C1-222ENST00000514654 CHRNA3P32297 505 aa6.55□□□□□ -1.36
ATP2C1-222ENST00000514654 TSPY1Q01534 308 aa6.55□□□□□ -1.36
ATP2C1-222ENST00000514654 ADCY2Q08462 1091 aa6.55□□□□□ -1.36
ATP2C1-222ENST00000514654 TMEM132DQ14C87 1099 aa6.55□□□□□ -1.36
ATP2C1-222ENST00000514654 LRRC14Q15048 493 aa6.55□□□□□ -1.36
ATP2C1-222ENST00000514654 TERF2Q15554 542 aa6.55□□□□□ -1.36
ATP2C1-222ENST00000514654 SPOPLQ6IQ16 392 aa6.55□□□□□ -1.36
ATP2C1-222ENST00000514654 FBXL16Q8N461 479 aa6.55□□□□□ -1.36
ATP2C1-222ENST00000514654 PPM1NQ8N819 430 aa6.55□□□□□ -1.36
ATP2C1-222ENST00000514654 PDCD2LQ9BRP1 358 aa6.55□□□□□ -1.36
ATP2C1-222ENST00000514654 ZBED2Q9BTP6 218 aa6.55□□□□□ -1.36
ATP2C1-222ENST00000514654 LACRTQ9GZZ8 138 aa6.55□□□□□ -1.36
ATP2C1-222ENST00000514654 KLC2Q9H0B6 622 aa6.55□□□□□ -1.36
ATP2C1-222ENST00000514654 ANKEF1Q9NU02 776 aa6.55□□□□□ -1.36
ATP2C1-222ENST00000514654 RRP15Q9Y3B9 282 aaKnown RBP6.55□□□□□ -1.36
ATP2C1-222ENST00000514654 ATP8B3O60423 1300 aa6.55□□□□□ -1.36
ATP2C1-222ENST00000514654 RIC1Q4ADV7 1423 aa6.55□□□□□ -1.36
ATP2C1-222ENST00000514654 ARHGEF37A1IGU5 675 aa6.55□□□□□ -1.36
ATP2C1-222ENST00000514654 EIF3DO15371 548 aaKnown RBP eCLIP6.55□□□□□ -1.36
ATP2C1-222ENST00000514654 SLC25A27O95847 323 aa6.55□□□□□ -1.36
ATP2C1-222ENST00000514654 MMEP08473 750 aa6.55□□□□□ -1.36
ATP2C1-222ENST00000514654 KRT7P08729 469 aa6.55□□□□□ -1.36
ATP2C1-222ENST00000514654 ATXN8OSP0DMR3 200 aa6.55□□□□□ -1.36
ATP2C1-222ENST00000514654 PDGFRAP16234 1089 aa6.55□□□□□ -1.36
ATP2C1-222ENST00000514654 COMTP21964 271 aa6.55□□□□□ -1.36
ATP2C1-222ENST00000514654 XPAP23025 273 aaPredicted RBP6.55□□□□□ -1.36
ATP2C1-222ENST00000514654 EPHB1P54762 984 aa6.55□□□□□ -1.36
ATP2C1-222ENST00000514654 ASPHQ12797 758 aa6.55□□□□□ -1.36
ATP2C1-222ENST00000514654 PDIA2Q13087 525 aaKnown RBP6.55□□□□□ -1.36
ATP2C1-222ENST00000514654 GNASQ5JWF2 1037 aa6.55□□□□□ -1.36
ATP2C1-222ENST00000514654 GLRA4Q5JXX5 417 aa6.55□□□□□ -1.36
ATP2C1-222ENST00000514654 IZUMO3Q5VZ72 239 aa6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms