RNA–Protein interactions for RNA: ENST00000514610.1

HMGCS1-207, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 2

Gene HMGCS1, Length 555 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-207ENST00000514610 PTPN7P35236 360 aa6.64□□□□□ -1.35
HMGCS1-207ENST00000514610 GZMKP49863 264 aa6.64□□□□□ -1.35
HMGCS1-207ENST00000514610 MAP2K6P52564 334 aa6.64□□□□□ -1.35
HMGCS1-207ENST00000514610 NPEPPSP55786 919 aa6.64□□□□□ -1.35
HMGCS1-207ENST00000514610 TBX4P57082 545 aa6.64□□□□□ -1.35
HMGCS1-207ENST00000514610 APBA1Q02410 837 aa6.64□□□□□ -1.35
HMGCS1-207ENST00000514610 MTM1Q13496 603 aa6.64□□□□□ -1.35
HMGCS1-207ENST00000514610 ARHGAP29Q52LW3 1261 aa6.64□□□□□ -1.35
HMGCS1-207ENST00000514610 ZFYVE27Q5T4F4 411 aa6.64□□□□□ -1.35
HMGCS1-207ENST00000514610 NOL8Q76FK4 1167 aaKnown RBP6.64□□□□□ -1.35
HMGCS1-207ENST00000514610 OVCH2Q7RTZ1 564 aa6.64□□□□□ -1.35
HMGCS1-207ENST00000514610 DRC7Q8IY82 874 aa6.64□□□□□ -1.35
HMGCS1-207ENST00000514610 IFI44Q8TCB0 444 aa6.64□□□□□ -1.35
HMGCS1-207ENST00000514610 TIFAQ96CG3 184 aa6.64□□□□□ -1.35
HMGCS1-207ENST00000514610 C1GALT1C1Q96EU7 318 aa6.64□□□□□ -1.35
HMGCS1-207ENST00000514610 IL17RAQ96F46 866 aa6.64□□□□□ -1.35
HMGCS1-207ENST00000514610 TMX3Q96JJ7 454 aa6.64□□□□□ -1.35
HMGCS1-207ENST00000514610 SAMD11Q96NU1 681 aa6.64□□□□□ -1.35
HMGCS1-207ENST00000514610 CDC5LQ99459 802 aaKnown RBP6.64□□□□□ -1.35
HMGCS1-207ENST00000514610 TCF25Q9BQ70 676 aa6.64□□□□□ -1.35
HMGCS1-207ENST00000514610 MANSC1Q9H8J5 431 aa6.64□□□□□ -1.35
HMGCS1-207ENST00000514610 ACTL7AQ9Y615 435 aa6.64□□□□□ -1.35
HMGCS1-207ENST00000514610 MYBBP1AQ9BQG0 1328 aaKnown RBP6.64□□□□□ -1.35
HMGCS1-207ENST00000514610 KIF3BO15066 747 aa6.63□□□□□ -1.35
HMGCS1-207ENST00000514610 ERC2O15083 957 aa6.63□□□□□ -1.35
HMGCS1-207ENST00000514610 ZNF536O15090 1300 aa6.63□□□□□ -1.35
HMGCS1-207ENST00000514610 GPR42O15529 346 aa6.63□□□□□ -1.35
HMGCS1-207ENST00000514610 CTNND1O60716 968 aaKnown RBP6.63□□□□□ -1.35
HMGCS1-207ENST00000514610 GPR32O75388 356 aa6.63□□□□□ -1.35
HMGCS1-207ENST00000514610 PLATP00750 562 aa6.63□□□□□ -1.35
HMGCS1-207ENST00000514610 GNALP38405 381 aa6.63□□□□□ -1.35
HMGCS1-207ENST00000514610 GBX1Q14549 363 aa6.63□□□□□ -1.35
HMGCS1-207ENST00000514610 TCTN3Q6NUS6 607 aa6.63□□□□□ -1.35
HMGCS1-207ENST00000514610 SPOCD1Q6ZMY3 1216 aa6.63□□□□□ -1.35
HMGCS1-207ENST00000514610 LIMS2Q7Z4I7 341 aa6.63□□□□□ -1.35
HMGCS1-207ENST00000514610 RGMAQ96B86 450 aa6.63□□□□□ -1.35
HMGCS1-207ENST00000514610 TMEM176AQ96HP8 235 aa6.63□□□□□ -1.35
HMGCS1-207ENST00000514610 CLPTM1LQ96KA5 538 aa6.63□□□□□ -1.35
HMGCS1-207ENST00000514610 OR14A2Q96R54 314 aa6.63□□□□□ -1.35
HMGCS1-207ENST00000514610 LRFN3Q9BTN0 628 aa6.63□□□□□ -1.35
HMGCS1-207ENST00000514610 SSBP3Q9BWW4 388 aaPredicted RBP6.63□□□□□ -1.35
HMGCS1-207ENST00000514610 SENP6Q9GZR1 1112 aaPredicted RBP6.63□□□□□ -1.35
HMGCS1-207ENST00000514610 NELFAQ9H3P2 528 aa6.63□□□□□ -1.35
HMGCS1-207ENST00000514610 GEMIN8Q9NWZ8 242 aaKnown RBP6.63□□□□□ -1.35
HMGCS1-207ENST00000514610 GABBR1Q9UBS5 961 aa6.63□□□□□ -1.35
HMGCS1-207ENST00000514610 H3BML4 177 aa6.62□□□□□ -1.35
HMGCS1-207ENST00000514610 FOXS1O43638 330 aa6.62□□□□□ -1.35
HMGCS1-207ENST00000514610 DDCP20711 480 aa6.62□□□□□ -1.35
HMGCS1-207ENST00000514610 ALDH1A3P47895 512 aa6.62□□□□□ -1.35
HMGCS1-207ENST00000514610 TLE1Q04724 770 aa6.62□□□□□ -1.35
HMGCS1-207ENST00000514610 UBXN11Q5T124 520 aa6.62□□□□□ -1.35
HMGCS1-207ENST00000514610 AFMIDQ63HM1 303 aa6.62□□□□□ -1.35
HMGCS1-207ENST00000514610 PPP4R3AQ6IN85 833 aa6.62□□□□□ -1.35
HMGCS1-207ENST00000514610 CYB5RLQ6IPT4 315 aa6.62□□□□□ -1.35
HMGCS1-207ENST00000514610 FAM111BQ6SJ93 734 aa6.62□□□□□ -1.35
HMGCS1-207ENST00000514610 TTC7BQ86TV6 843 aa6.62□□□□□ -1.35
HMGCS1-207ENST00000514610 RSPH3Q86UC2 560 aa6.62□□□□□ -1.35
HMGCS1-207ENST00000514610 DGKHQ86XP1 1220 aa6.62□□□□□ -1.35
HMGCS1-207ENST00000514610 DENND1CQ8IV53 801 aa6.62□□□□□ -1.35
HMGCS1-207ENST00000514610 DCBLD1Q8N8Z6 715 aa6.62□□□□□ -1.35
HMGCS1-207ENST00000514610 CYFIP2Q96F07 1278 aa6.62□□□□□ -1.35
HMGCS1-207ENST00000514610 CGRRF1Q99675 332 aa6.62□□□□□ -1.35
HMGCS1-207ENST00000514610 MSL2Q9HCI7 577 aa6.62□□□□□ -1.35
HMGCS1-207ENST00000514610 C1orf112Q9NSG2 853 aa6.62□□□□□ -1.35
HMGCS1-207ENST00000514610 A0A0G2JLL6 359 aaPredicted RBP6.61□□□□□ -1.35
HMGCS1-207ENST00000514610 NPEPPSL1A6NEC2 478 aa6.61□□□□□ -1.35
HMGCS1-207ENST00000514610 HOXA3O43365 443 aaPredicted RBP6.61□□□□□ -1.35
HMGCS1-207ENST00000514610 PRC1O43663 620 aa6.61□□□□□ -1.35
HMGCS1-207ENST00000514610 UBXN7O94888 489 aa6.61□□□□□ -1.35
HMGCS1-207ENST00000514610 FTLP02792 175 aaPredicted RBP6.61□□□□□ -1.35
HMGCS1-207ENST00000514610 INHBBP09529 407 aa6.61□□□□□ -1.35
HMGCS1-207ENST00000514610 RPS19P39019 145 aaKnown RBP6.61□□□□□ -1.35
HMGCS1-207ENST00000514610 FLT3LGP49771 235 aa6.61□□□□□ -1.35
HMGCS1-207ENST00000514610 ZNF280AP59817 542 aaPredicted RBP6.61□□□□□ -1.35
HMGCS1-207ENST00000514610 SP140Q13342 867 aa6.61□□□□□ -1.35
HMGCS1-207ENST00000514610 GRM7Q14831 915 aa6.61□□□□□ -1.35
HMGCS1-207ENST00000514610 FAM47AQ5JRC9 791 aa6.61□□□□□ -1.35
HMGCS1-207ENST00000514610 ANKS6Q68DC2 871 aa6.61□□□□□ -1.35
HMGCS1-207ENST00000514610 FUKQ8N0W3 1084 aa6.61□□□□□ -1.35
HMGCS1-207ENST00000514610 CAMKK1Q8N5S9 505 aa6.61□□□□□ -1.35
HMGCS1-207ENST00000514610 GIMAP8Q8ND71 665 aaPredicted RBP6.61□□□□□ -1.35
HMGCS1-207ENST00000514610 SLC35B2Q8TB61 432 aa6.61□□□□□ -1.35
HMGCS1-207ENST00000514610 CASKIN2Q8WXE0 1202 aa6.61□□□□□ -1.35
HMGCS1-207ENST00000514610 BORCS6Q96GS4 357 aa6.61□□□□□ -1.35
HMGCS1-207ENST00000514610 ZNF512Q96ME7 567 aaPredicted RBP6.61□□□□□ -1.35
HMGCS1-207ENST00000514610 TEPSINQ96N21 525 aa6.61□□□□□ -1.35
HMGCS1-207ENST00000514610 FAM193BQ96PV7 902 aaPredicted RBP6.61□□□□□ -1.35
HMGCS1-207ENST00000514610 VRK1Q99986 396 aaPredicted RBP6.61□□□□□ -1.35
HMGCS1-207ENST00000514610 TMEM140Q9NV12 185 aa6.61□□□□□ -1.35
HMGCS1-207ENST00000514610 PLA2G3Q9NZ20 509 aa6.61□□□□□ -1.35
HMGCS1-207ENST00000514610 RUVBL1Q9Y265 456 aaKnown RBP6.61□□□□□ -1.35
HMGCS1-207ENST00000514610 NR2E3Q9Y5X4 410 aa6.61□□□□□ -1.35
HMGCS1-207ENST00000514610 CXorf49A8MYA2 514 aaPredicted RBP6.6□□□□□ -1.35
HMGCS1-207ENST00000514610 B3GALT2O43825 422 aa6.6□□□□□ -1.35
HMGCS1-207ENST00000514610 TUSC2O75896 110 aa6.6□□□□□ -1.35
HMGCS1-207ENST00000514610 RAD17O75943 681 aa6.6□□□□□ -1.35
HMGCS1-207ENST00000514610 IL2RBP14784 551 aa6.6□□□□□ -1.35
HMGCS1-207ENST00000514610 HOXA5P20719 270 aa6.6□□□□□ -1.35
HMGCS1-207ENST00000514610 HK3P52790 923 aa6.6□□□□□ -1.35
HMGCS1-207ENST00000514610 USP14P54578 494 aa6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms