RNA–Protein interactions for RNA: ENST00000514536.5

USP46-209, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 2

Gene USP46, Length 1,589 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-209ENST00000514536 PCDHB13Q9Y5F0 798 aa15.28■□□□□ 0.04
USP46-209ENST00000514536 PRUNE2Q8WUY3 3088 aa15.27■□□□□ 0.04
USP46-209ENST00000514536 FNDC1Q4ZHG4 1894 aaPredicted RBP15.27■□□□□ 0.04
USP46-209ENST00000514536 PVALEFA0A1B0GWK0 134 aa15.27■□□□□ 0.03
USP46-209ENST00000514536 ANKRD63C9JTQ0 380 aa15.27■□□□□ 0.03
USP46-209ENST00000514536 B4GALT3O60512 393 aa15.27■□□□□ 0.03
USP46-209ENST00000514536 PPP1R37O75864 691 aa15.27■□□□□ 0.03
USP46-209ENST00000514536 PIGRP01833 764 aa15.27■□□□□ 0.03
USP46-209ENST00000514536 ALDH7A1P49419 539 aaKnown RBP15.27■□□□□ 0.03
USP46-209ENST00000514536 MCL1Q07820 350 aa15.27■□□□□ 0.03
USP46-209ENST00000514536 KCNA1Q09470 495 aa15.27■□□□□ 0.03
USP46-209ENST00000514536 NOLC1Q14978 699 aaKnown RBP eCLIP15.27■□□□□ 0.03
USP46-209ENST00000514536 CCDC85BQ15834 202 aaPredicted RBP15.27■□□□□ 0.03
USP46-209ENST00000514536 CSPP1Q1MSJ5 1256 aa15.27■□□□□ 0.03
USP46-209ENST00000514536 SEZ6Q53EL9 994 aa15.27■□□□□ 0.03
USP46-209ENST00000514536 SLC39A4Q6P5W5 647 aa15.27■□□□□ 0.03
USP46-209ENST00000514536 KRBA2Q6ZNG9 492 aa15.27■□□□□ 0.03
USP46-209ENST00000514536 UNC13DQ70J99 1090 aa15.27■□□□□ 0.03
USP46-209ENST00000514536 PPM1EQ8WY54 764 aa15.27■□□□□ 0.03
USP46-209ENST00000514536 HVCN1Q96D96 273 aa15.27■□□□□ 0.03
USP46-209ENST00000514536 ACCSQ96QU6 501 aa15.27■□□□□ 0.03
USP46-209ENST00000514536 RPS6KC1Q96S38 1066 aa15.27■□□□□ 0.03
USP46-209ENST00000514536 CCDC94Q9BW85 323 aaPredicted RBP15.27■□□□□ 0.03
USP46-209ENST00000514536 COL25A1Q9BXS0 654 aaPredicted RBP15.27■□□□□ 0.03
USP46-209ENST00000514536 HAPLN2Q9GZV7 340 aa15.27■□□□□ 0.03
USP46-209ENST00000514536 IKZF4Q9H2S9 585 aa15.27■□□□□ 0.03
USP46-209ENST00000514536 SPG21Q9NZD8 308 aa15.27■□□□□ 0.03
USP46-209ENST00000514536 LMCD1Q9NZU5 365 aa15.27■□□□□ 0.03
USP46-209ENST00000514536 MYH11P35749 1972 aa15.27■□□□□ 0.03
USP46-209ENST00000514536 FGF18O76093 207 aa15.26■□□□□ 0.03
USP46-209ENST00000514536 PRPF6O94906 941 aaKnown RBP15.26■□□□□ 0.03
USP46-209ENST00000514536 CSPG5O95196 566 aa15.26■□□□□ 0.03
USP46-209ENST00000514536 ALDH2P05091 517 aa15.26■□□□□ 0.03
USP46-209ENST00000514536 GALTP07902 379 aa15.26■□□□□ 0.03
USP46-209ENST00000514536 SLC11A1P49279 550 aa15.26■□□□□ 0.03
USP46-209ENST00000514536 PTPROQ16827 1216 aa15.26■□□□□ 0.03
USP46-209ENST00000514536 L1TD1Q5T7N2 865 aaKnown RBP15.26■□□□□ 0.03
USP46-209ENST00000514536 GLIS3Q8NEA6 775 aa15.26■□□□□ 0.03
USP46-209ENST00000514536 ACAP3Q96P50 834 aa15.26■□□□□ 0.03
USP46-209ENST00000514536 EXOC7Q9UPT5 735 aa15.26■□□□□ 0.03
USP46-209ENST00000514536 CUL9Q8IWT3 2517 aa15.26■□□□□ 0.03
USP46-209ENST00000514536 TISP43B9A030 160 aa15.25■□□□□ 0.03
USP46-209ENST00000514536 KLRC4O43908 158 aa15.25■□□□□ 0.03
USP46-209ENST00000514536 GADD45BO75293 160 aaPredicted RBP15.25■□□□□ 0.03
USP46-209ENST00000514536 DNAJB1P25685 340 aa15.25■□□□□ 0.03
USP46-209ENST00000514536 YARSP54577 528 aaKnown RBP15.25■□□□□ 0.03
USP46-209ENST00000514536 ALCAMQ13740 583 aa15.25■□□□□ 0.03
USP46-209ENST00000514536 FAM26FQ5R3K3 315 aa15.25■□□□□ 0.03
USP46-209ENST00000514536 COLGALT2Q8IYK4 626 aa15.25■□□□□ 0.03
USP46-209ENST00000514536 FMR1NBQ8N0W7 255 aaPredicted RBP15.25■□□□□ 0.03
USP46-209ENST00000514536 SLC39A11Q8N1S5 342 aa15.25■□□□□ 0.03
USP46-209ENST00000514536 POF1BQ8WVV4 589 aa15.25■□□□□ 0.03
USP46-209ENST00000514536 MRPL38Q96DV4 380 aaKnown RBP15.25■□□□□ 0.03
USP46-209ENST00000514536 FAN1Q9Y2M0 1017 aa15.25■□□□□ 0.03
USP46-209ENST00000514536 A0A0B4J269 797 aa15.24■□□□□ 0.03
USP46-209ENST00000514536 PTGESO14684 152 aa15.24■□□□□ 0.03
USP46-209ENST00000514536 PRR29P0C7W0 189 aa15.24■□□□□ 0.03
USP46-209ENST00000514536 PPM1AP35813 382 aa15.24■□□□□ 0.03
USP46-209ENST00000514536 PLCB3Q01970 1234 aa15.24■□□□□ 0.03
USP46-209ENST00000514536 KRT17Q04695 432 aa15.24■□□□□ 0.03
USP46-209ENST00000514536 EHHADHQ08426 723 aa15.24■□□□□ 0.03
USP46-209ENST00000514536 GRIK3Q13003 919 aa15.24■□□□□ 0.03
USP46-209ENST00000514536 CAMK1Q14012 370 aa15.24■□□□□ 0.03
USP46-209ENST00000514536 SLFN12LQ6IEE8 588 aa15.24■□□□□ 0.03
USP46-209ENST00000514536 STXBP4Q6ZWJ1 553 aa15.24■□□□□ 0.03
USP46-209ENST00000514536 SYCP3Q8IZU3 236 aa15.24■□□□□ 0.03
USP46-209ENST00000514536 ENGASEQ8NFI3 743 aa15.24■□□□□ 0.03
USP46-209ENST00000514536 TMEM175Q9BSA9 504 aa15.24■□□□□ 0.03
USP46-209ENST00000514536 MSTO1Q9BUK6 570 aa15.24■□□□□ 0.03
USP46-209ENST00000514536 LMAN2LQ9H0V9 348 aa15.24■□□□□ 0.03
USP46-209ENST00000514536 SLC39A2Q9NP94 309 aa15.24■□□□□ 0.03
USP46-209ENST00000514536 CHD7Q9P2D1 2997 aa15.24■□□□□ 0.03
USP46-209ENST00000514536 ZMYM2Q9UBW7 1377 aa15.24■□□□□ 0.03
USP46-209ENST00000514536 NRP1O14786 923 aa15.24■□□□□ 0.03
USP46-209ENST00000514536 MYL1P05976 194 aa15.24■□□□□ 0.03
USP46-209ENST00000514536 THP07101 528 aa15.24■□□□□ 0.03
USP46-209ENST00000514536 OR1G1P47890 313 aa15.24■□□□□ 0.03
USP46-209ENST00000514536 FAM160A1Q05DH4 1040 aa15.24■□□□□ 0.03
USP46-209ENST00000514536 DSC1Q08554 894 aa15.24■□□□□ 0.03
USP46-209ENST00000514536 SNW1Q13573 536 aaKnown RBP15.24■□□□□ 0.03
USP46-209ENST00000514536 KMT5BQ4FZB7 885 aa15.24■□□□□ 0.03
USP46-209ENST00000514536 GLRA4Q5JXX5 417 aa15.24■□□□□ 0.03
USP46-209ENST00000514536 ALKAL1Q6UXT8 129 aa15.24■□□□□ 0.03
USP46-209ENST00000514536 TMEM173Q86WV6 379 aaPredicted RBP15.24■□□□□ 0.03
USP46-209ENST00000514536 TMEM206Q9H813 350 aa15.24■□□□□ 0.03
USP46-209ENST00000514536 TOPORSQ9NS56 1045 aaPredicted RBP15.24■□□□□ 0.03
USP46-209ENST00000514536 PUF60Q9UHX1 559 aaKnown RBP15.24■□□□□ 0.03
USP46-209ENST00000514536 STYXL1Q9Y6J8 313 aa15.24■□□□□ 0.03
USP46-209ENST00000514536 VCANP13611 3396 aa15.23■□□□□ 0.03
USP46-209ENST00000514536 SMIM28A0A1B0GU29 152 aa15.23■□□□□ 0.03
USP46-209ENST00000514536 OGTO15294 1046 aa15.23■□□□□ 0.03
USP46-209ENST00000514536 CLTAP09496 248 aa15.23■□□□□ 0.03
USP46-209ENST00000514536 ADSSP30520 456 aa15.23■□□□□ 0.03
USP46-209ENST00000514536 TNFSF9P41273 254 aa15.23■□□□□ 0.03
USP46-209ENST00000514536 UBE3AQ05086 875 aa15.23■□□□□ 0.03
USP46-209ENST00000514536 SLC10A6Q3KNW5 377 aa15.23■□□□□ 0.03
USP46-209ENST00000514536 XKR4Q5GH76 650 aa15.23■□□□□ 0.03
USP46-209ENST00000514536 ZBTB41Q5SVQ8 909 aa15.23■□□□□ 0.03
USP46-209ENST00000514536 KANK3Q6NY19 840 aa15.23■□□□□ 0.03
USP46-209ENST00000514536 EPM2AIP1Q7L775 607 aaPredicted RBP15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms