RNA–Protein interactions for RNA: ENST00000513984.5

VCAN-211, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 1,825 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-211ENST00000513984 MAPK6Q16659 721 aa16.14■□□□□ 0.17
VCAN-211ENST00000513984 IFI16Q16666 785 aaKnown RBP16.14■□□□□ 0.17
VCAN-211ENST00000513984 DUSP28Q4G0W2 176 aa16.14■□□□□ 0.17
VCAN-211ENST00000513984 EFCAB12Q6NXP0 572 aa16.14■□□□□ 0.17
VCAN-211ENST00000513984 AFG1LQ8WV93 481 aa16.14■□□□□ 0.17
VCAN-211ENST00000513984 FAM81BQ96LP2 452 aa16.14■□□□□ 0.17
VCAN-211ENST00000513984 OSBPL9Q96SU4 736 aa16.14■□□□□ 0.17
VCAN-211ENST00000513984 ACO2Q99798 780 aaKnown RBP16.14■□□□□ 0.17
VCAN-211ENST00000513984 PDCL3Q9H2J4 239 aa16.14■□□□□ 0.17
VCAN-211ENST00000513984 PDE11AQ9HCR9 933 aa16.14■□□□□ 0.17
VCAN-211ENST00000513984 NCANO14594 1321 aa16.13■□□□□ 0.17
VCAN-211ENST00000513984 CNTNAP2Q9UHC6 1331 aa16.13■□□□□ 0.17
VCAN-211ENST00000513984 C11orf97A0A1B0GVM6 126 aaPredicted RBP16.13■□□□□ 0.17
VCAN-211ENST00000513984 GRID2IPA4D2P6 1211 aa16.13■□□□□ 0.17
VCAN-211ENST00000513984 TTLL13PA6NNM8 815 aa16.13■□□□□ 0.17
VCAN-211ENST00000513984 CLDN3O15551 220 aa16.13■□□□□ 0.17
VCAN-211ENST00000513984 C4BPAP04003 597 aaKnown RBP16.13■□□□□ 0.17
VCAN-211ENST00000513984 SRGAP2CP0DJJ0 459 aa16.13■□□□□ 0.17
VCAN-211ENST00000513984 TNFAIP3P21580 790 aa16.13■□□□□ 0.17
VCAN-211ENST00000513984 MATR3P43243 847 aaKnown RBP eCLIP16.13■□□□□ 0.17
VCAN-211ENST00000513984 ZBTB41Q5SVQ8 909 aa16.13■□□□□ 0.17
VCAN-211ENST00000513984 CHADLQ6NUI6 762 aa16.13■□□□□ 0.17
VCAN-211ENST00000513984 ENOSF1Q7L5Y1 443 aa16.13■□□□□ 0.17
VCAN-211ENST00000513984 ZNF572Q7Z3I7 529 aaPredicted RBP16.13■□□□□ 0.17
VCAN-211ENST00000513984 RHPN2Q8IUC4 686 aa16.13■□□□□ 0.17
VCAN-211ENST00000513984 LINC01465Q8N7H1 131 aa16.13■□□□□ 0.17
VCAN-211ENST00000513984 NPLOC4Q8TAT6 608 aa16.13■□□□□ 0.17
VCAN-211ENST00000513984 MMS19Q96T76 1030 aa16.13■□□□□ 0.17
VCAN-211ENST00000513984 CGRRF1Q99675 332 aa16.13■□□□□ 0.17
VCAN-211ENST00000513984 NFKBIZQ9BYH8 718 aa16.13■□□□□ 0.17
VCAN-211ENST00000513984 PTPRJQ12913 1337 aa16.13■□□□□ 0.17
VCAN-211ENST00000513984 MANSC4A6NHS7 340 aaPredicted RBP16.12■□□□□ 0.17
VCAN-211ENST00000513984 IGF2BP3O00425 579 aaKnown RBP eCLIP16.12■□□□□ 0.17
VCAN-211ENST00000513984 ABLIM1O14639 778 aa16.12■□□□□ 0.17
VCAN-211ENST00000513984 ZNF185O15231 689 aa16.12■□□□□ 0.17
VCAN-211ENST00000513984 PPFIA4O75335 1185 aa16.12■□□□□ 0.17
VCAN-211ENST00000513984 TMEM253P0C7T8 217 aa16.12■□□□□ 0.17
VCAN-211ENST00000513984 INSRRP14616 1297 aa16.12■□□□□ 0.17
VCAN-211ENST00000513984 TNNI1P19237 187 aa16.12■□□□□ 0.17
VCAN-211ENST00000513984 CLCN3P51790 818 aa16.12■□□□□ 0.17
VCAN-211ENST00000513984 GALCP54803 685 aa16.12■□□□□ 0.17
VCAN-211ENST00000513984 PTENP60484 403 aa16.12■□□□□ 0.17
VCAN-211ENST00000513984 ACVR2BQ13705 512 aa16.12■□□□□ 0.17
VCAN-211ENST00000513984 TDRD10Q5VZ19 366 aaKnown RBP16.12■□□□□ 0.17
VCAN-211ENST00000513984 CREG2Q8IUH2 290 aa16.12■□□□□ 0.17
VCAN-211ENST00000513984 BRSK2Q8IWQ3 736 aa16.12■□□□□ 0.17
VCAN-211ENST00000513984 MSANTD4Q8NCY6 345 aa16.12■□□□□ 0.17
VCAN-211ENST00000513984 EPS8L1Q8TE68 723 aa16.12■□□□□ 0.17
VCAN-211ENST00000513984 SLC20A1Q8WUM9 679 aa16.12■□□□□ 0.17
VCAN-211ENST00000513984 CAPZA3Q96KX2 299 aa16.12■□□□□ 0.17
VCAN-211ENST00000513984 C16orf70Q9BSU1 422 aa16.12■□□□□ 0.17
VCAN-211ENST00000513984 FZD8Q9H461 694 aa16.12■□□□□ 0.17
VCAN-211ENST00000513984 ARGLU1Q9NWB6 273 aaPredicted RBP16.12■□□□□ 0.17
VCAN-211ENST00000513984 SLC5A4Q9NY91 659 aa16.12■□□□□ 0.17
VCAN-211ENST00000513984 NOCTQ9UK39 431 aaKnown RBP16.12■□□□□ 0.17
VCAN-211ENST00000513984 MAGEB2O15479 319 aa16.12■□□□□ 0.17
VCAN-211ENST00000513984 SMPD1P17405 629 aa16.12■□□□□ 0.17
VCAN-211ENST00000513984 PROZP22891 400 aa16.12■□□□□ 0.17
VCAN-211ENST00000513984 CLCN6P51797 869 aa16.12■□□□□ 0.17
VCAN-211ENST00000513984 POU5F1BQ06416 359 aa16.12■□□□□ 0.17
VCAN-211ENST00000513984 MCL1Q07820 350 aa16.12■□□□□ 0.17
VCAN-211ENST00000513984 GRM1Q13255 1194 aa16.12■□□□□ 0.17
VCAN-211ENST00000513984 IRF5Q13568 498 aa16.12■□□□□ 0.17
VCAN-211ENST00000513984 MORN1Q5T089 497 aa16.12■□□□□ 0.17
VCAN-211ENST00000513984 MEI1Q5TIA1 1274 aa16.12■□□□□ 0.17
VCAN-211ENST00000513984 IQSEC1Q6DN90 963 aa16.12■□□□□ 0.17
VCAN-211ENST00000513984 NFRKBQ6P4R8 1299 aa16.12■□□□□ 0.17
VCAN-211ENST00000513984 DNAAF5Q86Y56 855 aa16.12■□□□□ 0.17
VCAN-211ENST00000513984 LRRC57Q8N9N7 239 aa16.12■□□□□ 0.17
VCAN-211ENST00000513984 EPC1Q9H2F5 836 aa16.12■□□□□ 0.17
VCAN-211ENST00000513984 ANKZF1Q9H8Y5 726 aa16.12■□□□□ 0.17
VCAN-211ENST00000513984 C1orf112Q9NSG2 853 aa16.12■□□□□ 0.17
VCAN-211ENST00000513984 CPA4Q9UI42 421 aa16.12■□□□□ 0.17
VCAN-211ENST00000513984 PDE2AO00408 941 aaPredicted RBP16.11■□□□□ 0.17
VCAN-211ENST00000513984 ACKR2O00590 384 aa16.11■□□□□ 0.17
VCAN-211ENST00000513984 OGTO15294 1046 aa16.11■□□□□ 0.17
VCAN-211ENST00000513984 NCK2O43639 380 aa16.11■□□□□ 0.17
VCAN-211ENST00000513984 HLA-DRAP01903 254 aa16.11■□□□□ 0.17
VCAN-211ENST00000513984 ZNF286BP0CG31 522 aa16.11■□□□□ 0.17
VCAN-211ENST00000513984 ZNF157P51786 506 aaPredicted RBP16.11■□□□□ 0.17
VCAN-211ENST00000513984 ITIH3Q06033 890 aa16.11■□□□□ 0.17
VCAN-211ENST00000513984 LMBRD2Q68DH5 695 aaPredicted RBP16.11■□□□□ 0.17
VCAN-211ENST00000513984 TSHZ1Q6ZSZ6 1077 aa16.11■□□□□ 0.17
VCAN-211ENST00000513984 PALB2Q86YC2 1186 aa16.11■□□□□ 0.17
VCAN-211ENST00000513984 METTL13Q8N6R0 699 aa16.11■□□□□ 0.17
VCAN-211ENST00000513984 NOA1Q8NC60 698 aaKnown RBP16.11■□□□□ 0.17
VCAN-211ENST00000513984 TPCN2Q8NHX9 752 aa16.11■□□□□ 0.17
VCAN-211ENST00000513984 COG1Q8WTW3 980 aa16.11■□□□□ 0.17
VCAN-211ENST00000513984 TATDN2Q93075 761 aa16.11■□□□□ 0.17
VCAN-211ENST00000513984 FAM84AQ96KN4 292 aa16.11■□□□□ 0.17
VCAN-211ENST00000513984 NLRP4Q96MN2 994 aa16.11■□□□□ 0.17
VCAN-211ENST00000513984 PARD6BQ9BYG5 372 aa16.11■□□□□ 0.17
VCAN-211ENST00000513984 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.11■□□□□ 0.17
VCAN-211ENST00000513984 TULP1O00294 542 aaPredicted RBP16.1■□□□□ 0.17
VCAN-211ENST00000513984 CYP26A1O43174 497 aa16.1■□□□□ 0.17
VCAN-211ENST00000513984 SGPL1O95470 568 aa16.1■□□□□ 0.17
VCAN-211ENST00000513984 VNN1O95497 513 aa16.1■□□□□ 0.17
VCAN-211ENST00000513984 FTCDO95954 541 aa16.1■□□□□ 0.17
VCAN-211ENST00000513984 GJB1P08034 283 aa16.1■□□□□ 0.17
VCAN-211ENST00000513984 MMP3P08254 477 aa16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms