RNA–Protein interactions for RNA: ENST00000513873.1

CLDND1-228, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 538 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-228ENST00000513873 WNK3Q9BYP7 1800 aa5.51□□□□□ -1.53
CLDND1-228ENST00000513873 CRB1P82279 1406 aa5.51□□□□□ -1.53
CLDND1-228ENST00000513873 ADAMTS20P59510 1910 aa5.51□□□□□ -1.53
CLDND1-228ENST00000513873 A0A0G2JNJ9 132 aa5.51□□□□□ -1.53
CLDND1-228ENST00000513873 ZEB2O60315 1214 aa5.51□□□□□ -1.53
CLDND1-228ENST00000513873 B4GALT4O60513 344 aa5.51□□□□□ -1.53
CLDND1-228ENST00000513873 KLHL18O94889 574 aa5.51□□□□□ -1.53
CLDND1-228ENST00000513873 MPIG6BO95866 241 aa5.51□□□□□ -1.53
CLDND1-228ENST00000513873 HMGCRP04035 888 aa5.51□□□□□ -1.53
CLDND1-228ENST00000513873 COL6A1P12109 1028 aa5.51□□□□□ -1.53
CLDND1-228ENST00000513873 CNR2P34972 360 aa5.51□□□□□ -1.53
CLDND1-228ENST00000513873 STAT3P40763 770 aa5.51□□□□□ -1.53
CLDND1-228ENST00000513873 KCNQ1P51787 676 aa5.51□□□□□ -1.53
CLDND1-228ENST00000513873 RARSP54136 660 aaKnown RBP5.51□□□□□ -1.53
CLDND1-228ENST00000513873 ZXDAP98168 799 aa5.51□□□□□ -1.53
CLDND1-228ENST00000513873 CD83Q01151 205 aa5.51□□□□□ -1.53
CLDND1-228ENST00000513873 STRN3Q13033 797 aa5.51□□□□□ -1.53
CLDND1-228ENST00000513873 ATP13A4Q4VNC1 1196 aa5.51□□□□□ -1.53
CLDND1-228ENST00000513873 GRAMD4Q6IC98 578 aa5.51□□□□□ -1.53
CLDND1-228ENST00000513873 ARHGEF18Q6ZSZ5 1173 aa5.51□□□□□ -1.53
CLDND1-228ENST00000513873 THNSL2Q86YJ6 484 aa5.51□□□□□ -1.53
CLDND1-228ENST00000513873 C16orf71Q8IYS4 520 aaPredicted RBP5.51□□□□□ -1.53
CLDND1-228ENST00000513873 RTKN2Q8IZC4 609 aa5.51□□□□□ -1.53
CLDND1-228ENST00000513873 UBR7Q8N806 425 aa5.51□□□□□ -1.53
CLDND1-228ENST00000513873 ARHGAP45Q92619 1136 aa5.51□□□□□ -1.53
CLDND1-228ENST00000513873 LTV1Q96GA3 475 aaPredicted RBP5.51□□□□□ -1.53
CLDND1-228ENST00000513873 AJUBAQ96IF1 538 aa5.51□□□□□ -1.53
CLDND1-228ENST00000513873 PHACTR3Q96KR7 559 aa5.51□□□□□ -1.53
CLDND1-228ENST00000513873 IFT22Q9H7X7 185 aa5.51□□□□□ -1.53
CLDND1-228ENST00000513873 SMC4Q9NTJ3 1288 aa5.51□□□□□ -1.53
CLDND1-228ENST00000513873 Q9UFV3 132 aa5.51□□□□□ -1.53
CLDND1-228ENST00000513873 ADAM29Q9UKF5 820 aa5.51□□□□□ -1.53
CLDND1-228ENST00000513873 KDRP35968 1356 aa5.51□□□□□ -1.53
CLDND1-228ENST00000513873 MON2Q7Z3U7 1717 aa5.51□□□□□ -1.53
CLDND1-228ENST00000513873 DNAJC6O75061 913 aa5.5□□□□□ -1.53
CLDND1-228ENST00000513873 BCAR1P56945 870 aa5.5□□□□□ -1.53
CLDND1-228ENST00000513873 IRX6P78412 446 aaPredicted RBP5.5□□□□□ -1.53
CLDND1-228ENST00000513873 EXOSC9Q06265 439 aaKnown RBP5.5□□□□□ -1.53
CLDND1-228ENST00000513873 TEFQ10587 303 aa5.5□□□□□ -1.53
CLDND1-228ENST00000513873 MOGSQ13724 837 aa5.5□□□□□ -1.53
CLDND1-228ENST00000513873 LRRC32Q14392 662 aa5.5□□□□□ -1.53
CLDND1-228ENST00000513873 STILQ15468 1287 aa5.5□□□□□ -1.53
CLDND1-228ENST00000513873 TAF7Q15545 349 aaPredicted RBP5.5□□□□□ -1.53
CLDND1-228ENST00000513873 SEPT7Q16181 437 aaKnown RBP5.5□□□□□ -1.53
CLDND1-228ENST00000513873 ZNF827Q17R98 1081 aa5.5□□□□□ -1.53
CLDND1-228ENST00000513873 ZMAT1Q5H9K5 638 aa5.5□□□□□ -1.53
CLDND1-228ENST00000513873 RTN4RL1Q86UN2 441 aaPredicted RBP5.5□□□□□ -1.53
CLDND1-228ENST00000513873 FERMT3Q86UX7 667 aa5.5□□□□□ -1.53
CLDND1-228ENST00000513873 FRAT1Q92837 279 aaPredicted RBP5.5□□□□□ -1.53
CLDND1-228ENST00000513873 FOXRED1Q96CU9 486 aaPredicted RBP5.5□□□□□ -1.53
CLDND1-228ENST00000513873 C16orf92Q96LL3 132 aa5.5□□□□□ -1.53
CLDND1-228ENST00000513873 BDH2Q9BUT1 245 aa5.5□□□□□ -1.53
CLDND1-228ENST00000513873 STK31Q9BXU1 1019 aa5.5□□□□□ -1.53
CLDND1-228ENST00000513873 API5Q9BZZ5 524 aaKnown RBP5.5□□□□□ -1.53
CLDND1-228ENST00000513873 ADAM7Q9H2U9 754 aa5.5□□□□□ -1.53
CLDND1-228ENST00000513873 SPTLC3Q9NUV7 552 aa5.5□□□□□ -1.53
CLDND1-228ENST00000513873 H2AFY2Q9P0M6 372 aaPredicted RBP5.5□□□□□ -1.53
CLDND1-228ENST00000513873 SAE1Q9UBE0 346 aaPredicted RBP5.5□□□□□ -1.53
CLDND1-228ENST00000513873 TSPYL4Q9UJ04 414 aa5.5□□□□□ -1.53
CLDND1-228ENST00000513873 CDC42EP3Q9UKI2 254 aa5.5□□□□□ -1.53
CLDND1-228ENST00000513873 DDX19BQ9UMR2 479 aa5.5□□□□□ -1.53
CLDND1-228ENST00000513873 INVSQ9Y283 1065 aa5.5□□□□□ -1.53
CLDND1-228ENST00000513873 NOC2LQ9Y3T9 749 aaKnown RBP5.5□□□□□ -1.53
CLDND1-228ENST00000513873 ANKRD26Q9UPS8 1709 aa5.5□□□□□ -1.53
CLDND1-228ENST00000513873 CPDO75976 1380 aa5.5□□□□□ -1.53
CLDND1-228ENST00000513873 NHSQ6T4R5 1651 aa5.5□□□□□ -1.53
CLDND1-228ENST00000513873 BTAF1O14981 1849 aa5.49□□□□□ -1.53
CLDND1-228ENST00000513873 KIF20BQ96Q89 1820 aa5.49□□□□□ -1.53
CLDND1-228ENST00000513873 CHL1O00533 1208 aa5.49□□□□□ -1.53
CLDND1-228ENST00000513873 BRINP1O60477 761 aa5.49□□□□□ -1.53
CLDND1-228ENST00000513873 ULK1O75385 1050 aa5.49□□□□□ -1.53
CLDND1-228ENST00000513873 PRLP01236 227 aa5.49□□□□□ -1.53
CLDND1-228ENST00000513873 ZNF853P0CG23 659 aa5.49□□□□□ -1.53
CLDND1-228ENST00000513873 ETV4P43268 484 aa5.49□□□□□ -1.53
CLDND1-228ENST00000513873 ADCY2Q08462 1091 aa5.49□□□□□ -1.53
CLDND1-228ENST00000513873 TOP3AQ13472 1001 aaPredicted RBP5.49□□□□□ -1.53
CLDND1-228ENST00000513873 MTHFSDQ2M296 383 aaKnown RBP5.49□□□□□ -1.53
CLDND1-228ENST00000513873 TWISTNBQ3B726 338 aaPredicted RBP5.49□□□□□ -1.53
CLDND1-228ENST00000513873 ZFYVE27Q5T4F4 411 aa5.49□□□□□ -1.53
CLDND1-228ENST00000513873 GPR158Q5T848 1215 aa5.49□□□□□ -1.53
CLDND1-228ENST00000513873 ESPNLQ6ZVH7 1005 aa5.49□□□□□ -1.53
CLDND1-228ENST00000513873 CENPQQ7L2Z9 268 aaPredicted RBP5.49□□□□□ -1.53
CLDND1-228ENST00000513873 KRT26Q7Z3Y9 468 aa5.49□□□□□ -1.53
CLDND1-228ENST00000513873 RNF180Q86T96 592 aa5.49□□□□□ -1.53
CLDND1-228ENST00000513873 ATL2Q8NHH9 583 aa5.49□□□□□ -1.53
CLDND1-228ENST00000513873 FERMT2Q96AC1 680 aa5.49□□□□□ -1.53
CLDND1-228ENST00000513873 ZDHHC5Q9C0B5 715 aa5.49□□□□□ -1.53
CLDND1-228ENST00000513873 USP36Q9P275 1121 aaKnown RBP5.49□□□□□ -1.53
CLDND1-228ENST00000513873 FAM184BQ9ULE4 1060 aa5.49□□□□□ -1.53
CLDND1-228ENST00000513873 WDR3Q9UNX4 943 aaKnown RBP eCLIP5.49□□□□□ -1.53
CLDND1-228ENST00000513873 HDAC5Q9UQL6 1122 aa5.49□□□□□ -1.53
CLDND1-228ENST00000513873 PNPLA7Q6ZV29 1317 aa5.48□□□□□ -1.53
CLDND1-228ENST00000513873 CICQ96RK0 1608 aaPredicted RBP5.48□□□□□ -1.53
CLDND1-228ENST00000513873 COL5A2P05997 1499 aaPredicted RBP5.48□□□□□ -1.53
CLDND1-228ENST00000513873 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP5.48□□□□□ -1.53
CLDND1-228ENST00000513873 BCAR3O75815 825 aa5.48□□□□□ -1.53
CLDND1-228ENST00000513873 PRPF6O94906 941 aaKnown RBP5.48□□□□□ -1.53
CLDND1-228ENST00000513873 HOXB7P09629 217 aa5.48□□□□□ -1.53
CLDND1-228ENST00000513873 ADCYAP1R1P41586 468 aa5.48□□□□□ -1.53
CLDND1-228ENST00000513873 RGS3P49796 1198 aa5.48□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms