RNA–Protein interactions for RNA: ENST00000513761.5

CLCN3-209, Transcript of chloride voltage-gated channel 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CLCN3, Length 6,692 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-209ENST00000513761 TMC3Q7Z5M5 1100 aa8.24□□□□□ -1.09
CLCN3-209ENST00000513761 ATP11CQ8NB49 1132 aa8.24□□□□□ -1.09
CLCN3-209ENST00000513761 ZNF507Q8TCN5 953 aa8.24□□□□□ -1.09
CLCN3-209ENST00000513761 SLC7A3Q8WY07 619 aa8.24□□□□□ -1.09
CLCN3-209ENST00000513761 TRIM56Q9BRZ2 755 aaKnown RBP8.24□□□□□ -1.09
CLCN3-209ENST00000513761 SEL1LQ9UBV2 794 aa8.24□□□□□ -1.09
CLCN3-209ENST00000513761 NEU2Q9Y3R4 380 aa8.24□□□□□ -1.09
CLCN3-209ENST00000513761 TRAPPC3O43617 180 aa8.23□□□□□ -1.09
CLCN3-209ENST00000513761 ALDH18A1P54886 795 aaKnown RBP8.23□□□□□ -1.09
CLCN3-209ENST00000513761 OVGP1Q12889 678 aa8.23□□□□□ -1.09
CLCN3-209ENST00000513761 TRIML2Q8N7C3 387 aa8.23□□□□□ -1.09
CLCN3-209ENST00000513761 PRPF38AQ8NAV1 312 aaKnown RBP8.23□□□□□ -1.09
CLCN3-209ENST00000513761 ATP6V0A4Q9HBG4 840 aa8.23□□□□□ -1.09
CLCN3-209ENST00000513761 THEGQ9P2T0 379 aa8.23□□□□□ -1.09
CLCN3-209ENST00000513761 HESX1Q9UBX0 185 aa8.23□□□□□ -1.09
CLCN3-209ENST00000513761 PRPSAP2O60256 369 aa8.23□□□□□ -1.09
CLCN3-209ENST00000513761 MARK3P27448 753 aa8.23□□□□□ -1.09
CLCN3-209ENST00000513761 GNA15P30679 374 aa8.23□□□□□ -1.09
CLCN3-209ENST00000513761 SERPINB4P48594 390 aa8.23□□□□□ -1.09
CLCN3-209ENST00000513761 ART3Q13508 389 aa8.23□□□□□ -1.09
CLCN3-209ENST00000513761 TRADDQ15628 312 aa8.23□□□□□ -1.09
CLCN3-209ENST00000513761 RASSF3Q86WH2 238 aa8.23□□□□□ -1.09
CLCN3-209ENST00000513761 CATSPER3Q86XQ3 398 aa8.23□□□□□ -1.09
CLCN3-209ENST00000513761 NUDCD3Q8IVD9 361 aa8.23□□□□□ -1.09
CLCN3-209ENST00000513761 MSL3Q8N5Y2 521 aaKnown RBP8.23□□□□□ -1.09
CLCN3-209ENST00000513761 MSTO1Q9BUK6 570 aa8.23□□□□□ -1.09
CLCN3-209ENST00000513761 FLT1P17948 1338 aa8.23□□□□□ -1.09
CLCN3-209ENST00000513761 BBOX1O75936 387 aa8.23□□□□□ -1.09
CLCN3-209ENST00000513761 RFX1P22670 979 aa8.23□□□□□ -1.09
CLCN3-209ENST00000513761 MAGEA4P43358 317 aa8.23□□□□□ -1.09
CLCN3-209ENST00000513761 LVRNQ6Q4G3 990 aa8.23□□□□□ -1.09
CLCN3-209ENST00000513761 DAGLBQ8NCG7 672 aa8.23□□□□□ -1.09
CLCN3-209ENST00000513761 TSSK1BQ9BXA7 367 aa8.23□□□□□ -1.09
CLCN3-209ENST00000513761 NGRNQ9NPE2 291 aaKnown RBP8.23□□□□□ -1.09
CLCN3-209ENST00000513761 EPS15L1Q9UBC2 864 aa8.23□□□□□ -1.09
CLCN3-209ENST00000513761 GJA3Q9Y6H8 435 aa8.23□□□□□ -1.09
CLCN3-209ENST00000513761 PBX1P40424 430 aa8.23□□□□□ -1.09
CLCN3-209ENST00000513761 DYNC1I2Q13409 638 aaKnown RBP8.23□□□□□ -1.09
CLCN3-209ENST00000513761 PPP6R3Q5H9R7 873 aaPredicted RBP8.23□□□□□ -1.09
CLCN3-209ENST00000513761 TMEM179Q6ZVK1 233 aa8.23□□□□□ -1.09
CLCN3-209ENST00000513761 HAUS6Q7Z4H7 955 aa8.23□□□□□ -1.09
CLCN3-209ENST00000513761 SLC13A5Q86YT5 568 aaPredicted RBP8.23□□□□□ -1.09
CLCN3-209ENST00000513761 DNAAF3Q8N9W5 541 aa8.23□□□□□ -1.09
CLCN3-209ENST00000513761 INO80B-WBP1J3KQ70 363 aa8.23□□□□□ -1.09
CLCN3-209ENST00000513761 FOXN3O00409 490 aaPredicted RBP8.23□□□□□ -1.09
CLCN3-209ENST00000513761 GIPC1O14908 333 aa8.23□□□□□ -1.09
CLCN3-209ENST00000513761 FBXL13Q8NEE6 735 aa8.23□□□□□ -1.09
CLCN3-209ENST00000513761 PRCCQ92733 491 aaPredicted RBP8.23□□□□□ -1.09
CLCN3-209ENST00000513761 INO80BQ9C086 356 aaPredicted RBP8.23□□□□□ -1.09
CLCN3-209ENST00000513761 SMG5Q9UPR3 1016 aaKnown RBP8.23□□□□□ -1.09
CLCN3-209ENST00000513761 ZBTB12Q9Y330 459 aaPredicted RBP8.23□□□□□ -1.09
CLCN3-209ENST00000513761 PABPN1LA6NDY0 278 aaKnown RBP8.22□□□□□ -1.09
CLCN3-209ENST00000513761 K7ERI5 159 aa8.22□□□□□ -1.09
CLCN3-209ENST00000513761 CCDC22O60826 627 aa8.22□□□□□ -1.09
CLCN3-209ENST00000513761 GSTA1P08263 222 aa8.22□□□□□ -1.09
CLCN3-209ENST00000513761 GSTA2P09210 222 aa8.22□□□□□ -1.09
CLCN3-209ENST00000513761 ITGB3BPQ13352 177 aaPredicted RBP8.22□□□□□ -1.09
CLCN3-209ENST00000513761 ANKRD20A4Q4UJ75 823 aa8.22□□□□□ -1.09
CLCN3-209ENST00000513761 RABGAP1LQ5R372 815 aa8.22□□□□□ -1.09
CLCN3-209ENST00000513761 ANKRD20A2Q5SQ80 823 aa8.22□□□□□ -1.09
CLCN3-209ENST00000513761 ANKRD20A1Q5TYW2 823 aa8.22□□□□□ -1.09
CLCN3-209ENST00000513761 RCSD1Q6JBY9 416 aa8.22□□□□□ -1.09
CLCN3-209ENST00000513761 GLIS3Q8NEA6 775 aa8.22□□□□□ -1.09
CLCN3-209ENST00000513761 PDZD8Q8NEN9 1154 aa8.22□□□□□ -1.09
CLCN3-209ENST00000513761 SCFD1Q8WVM8 642 aa8.22□□□□□ -1.09
CLCN3-209ENST00000513761 TEKT4Q8WW24 435 aa8.22□□□□□ -1.09
CLCN3-209ENST00000513761 CDC42EP4Q9H3Q1 356 aaKnown RBP8.22□□□□□ -1.09
CLCN3-209ENST00000513761 JMJD4Q9H9V9 463 aa8.22□□□□□ -1.09
CLCN3-209ENST00000513761 FGFR2P21802 821 aa8.22□□□□□ -1.09
CLCN3-209ENST00000513761 IGBP1P78318 339 aa8.22□□□□□ -1.09
CLCN3-209ENST00000513761 TEX9Q8N6V9 391 aa8.22□□□□□ -1.09
CLCN3-209ENST00000513761 MCUQ8NE86 351 aa8.22□□□□□ -1.09
CLCN3-209ENST00000513761 ZSWIM1Q9BR11 485 aa8.22□□□□□ -1.09
CLCN3-209ENST00000513761 THTPAQ9BU02 230 aa8.22□□□□□ -1.09
CLCN3-209ENST00000513761 HSPBP1Q9NZL4 362 aa8.22□□□□□ -1.09
CLCN3-209ENST00000513761 MYO3BQ8WXR4 1341 aa8.22□□□□□ -1.09
CLCN3-209ENST00000513761 ZNF335Q9H4Z2 1342 aaPredicted RBP8.22□□□□□ -1.09
CLCN3-209ENST00000513761 HSPA4LO95757 839 aa8.22□□□□□ -1.09
CLCN3-209ENST00000513761 MRPS35P82673 323 aaKnown RBP8.22□□□□□ -1.09
CLCN3-209ENST00000513761 SATB1Q01826 763 aa8.22□□□□□ -1.09
CLCN3-209ENST00000513761 IL17AQ16552 155 aa8.22□□□□□ -1.09
CLCN3-209ENST00000513761 C2CD6Q53TS8 623 aa8.22□□□□□ -1.09
CLCN3-209ENST00000513761 EP400NLQ6ZTU2 488 aa8.22□□□□□ -1.09
CLCN3-209ENST00000513761 AGR3Q8TD06 166 aa8.22□□□□□ -1.09
CLCN3-209ENST00000513761 FAM149B1Q96BN6 582 aa8.22□□□□□ -1.09
CLCN3-209ENST00000513761 SERPINB12Q96P63 405 aa8.22□□□□□ -1.09
CLCN3-209ENST00000513761 PHTF1Q9UMS5 762 aa8.22□□□□□ -1.09
CLCN3-209ENST00000513761 UBAP1LF5GYI3 381 aa8.22□□□□□ -1.09
CLCN3-209ENST00000513761 MED24O75448 989 aa8.22□□□□□ -1.09
CLCN3-209ENST00000513761 KRT38O76015 456 aa8.22□□□□□ -1.09
CLCN3-209ENST00000513761 ESRRGP62508 458 aa8.22□□□□□ -1.09
CLCN3-209ENST00000513761 MTMR1Q13613 665 aa8.22□□□□□ -1.09
CLCN3-209ENST00000513761 RCN1Q15293 331 aa8.22□□□□□ -1.09
CLCN3-209ENST00000513761 SENP1Q9P0U3 644 aa8.22□□□□□ -1.09
CLCN3-209ENST00000513761 UVRAGQ9P2Y5 699 aa8.22□□□□□ -1.09
CLCN3-209ENST00000513761 PALM3A6NDB9 673 aaPredicted RBP8.22□□□□□ -1.09
CLCN3-209ENST00000513761 CAPN9O14815 690 aa8.22□□□□□ -1.09
CLCN3-209ENST00000513761 AKAP3O75969 853 aa8.22□□□□□ -1.09
CLCN3-209ENST00000513761 EAPPQ56P03 285 aaPredicted RBP8.22□□□□□ -1.09
CLCN3-209ENST00000513761 TMEM35BQ8NCS4 154 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms