RNA–Protein interactions for RNA: ENST00000513562.1

DDX41-216, Transcript of DEAD-box helicase 41, humanhuman

TSL 4

Gene DDX41, Length 552 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-216ENST00000513562 CACNA1IQ9P0X4 2223 aa12.21□□□□□ -0.46
DDX41-216ENST00000513562 MAP1BP46821 2468 aaKnown RBP12.2□□□□□ -0.46
DDX41-216ENST00000513562 LOC105378220A0A1B0GUY1 285 aaPredicted RBP12.2□□□□□ -0.46
DDX41-216ENST00000513562 ASAP2O43150 1006 aa12.2□□□□□ -0.46
DDX41-216ENST00000513562 TADA2AO75478 443 aa12.2□□□□□ -0.46
DDX41-216ENST00000513562 ECI2O75521 394 aa12.2□□□□□ -0.46
DDX41-216ENST00000513562 RETP07949 1114 aa12.2□□□□□ -0.46
DDX41-216ENST00000513562 QARSP47897 775 aaKnown RBP12.2□□□□□ -0.46
DDX41-216ENST00000513562 NRLP54845 237 aa12.2□□□□□ -0.46
DDX41-216ENST00000513562 HSP90AA2PQ14568 343 aaPredicted RBP12.2□□□□□ -0.46
DDX41-216ENST00000513562 LPAL2Q16609 132 aa12.2□□□□□ -0.46
DDX41-216ENST00000513562 ADCK5Q3MIX3 580 aa12.2□□□□□ -0.46
DDX41-216ENST00000513562 FERMT3Q86UX7 667 aa12.2□□□□□ -0.46
DDX41-216ENST00000513562 HACE1Q8IYU2 909 aa12.2□□□□□ -0.46
DDX41-216ENST00000513562 CELF5Q8N6W0 485 aaKnown RBP12.2□□□□□ -0.46
DDX41-216ENST00000513562 LNX1Q8TBB1 728 aaPredicted RBP12.2□□□□□ -0.46
DDX41-216ENST00000513562 SLC7A14Q8TBB6 771 aa12.2□□□□□ -0.46
DDX41-216ENST00000513562 CPB2Q96IY4 423 aa12.2□□□□□ -0.46
DDX41-216ENST00000513562 IER2Q9BTL4 223 aa12.2□□□□□ -0.46
DDX41-216ENST00000513562 TTPALQ9BTX7 342 aa12.2□□□□□ -0.46
DDX41-216ENST00000513562 APOL6Q9BWW8 343 aa12.2□□□□□ -0.46
DDX41-216ENST00000513562 CHRDQ9H2X0 955 aa12.2□□□□□ -0.46
DDX41-216ENST00000513562 HEBP1Q9NRV9 189 aa12.2□□□□□ -0.46
DDX41-216ENST00000513562 VPS54Q9P1Q0 977 aa12.2□□□□□ -0.46
DDX41-216ENST00000513562 WRAP73Q9P2S5 460 aaPredicted RBP12.2□□□□□ -0.46
DDX41-216ENST00000513562 RAB23Q9ULC3 237 aa12.2□□□□□ -0.46
DDX41-216ENST00000513562 NAP1L2Q9ULW6 460 aaPredicted RBP12.2□□□□□ -0.46
DDX41-216ENST00000513562 POLIQ9UNA4 740 aa12.2□□□□□ -0.46
DDX41-216ENST00000513562 EML1O00423 815 aa12.19□□□□□ -0.46
DDX41-216ENST00000513562 ADAM12O43184 909 aa12.19□□□□□ -0.46
DDX41-216ENST00000513562 DKC1O60832 514 aaKnown RBP eCLIP12.19□□□□□ -0.46
DDX41-216ENST00000513562 AKAP5P24588 427 aa12.19□□□□□ -0.46
DDX41-216ENST00000513562 PTENP60484 403 aa12.19□□□□□ -0.46
DDX41-216ENST00000513562 EMC2Q15006 297 aa12.19□□□□□ -0.46
DDX41-216ENST00000513562 PSMD5Q16401 504 aa12.19□□□□□ -0.46
DDX41-216ENST00000513562 AMHR2Q16671 573 aa12.19□□□□□ -0.46
DDX41-216ENST00000513562 TSGA10IPQ3SY00 556 aa12.19□□□□□ -0.46
DDX41-216ENST00000513562 PABPC1LQ4VXU2 614 aaKnown RBP12.19□□□□□ -0.46
DDX41-216ENST00000513562 MOXD1Q6UVY6 613 aa12.19□□□□□ -0.46
DDX41-216ENST00000513562 IFNLR1Q8IU57 520 aaPredicted RBP12.19□□□□□ -0.46
DDX41-216ENST00000513562 RASEFQ8IZ41 740 aa12.19□□□□□ -0.46
DDX41-216ENST00000513562 TCP11Q8WWU5 503 aa12.19□□□□□ -0.46
DDX41-216ENST00000513562 RABGGTAQ92696 567 aa12.19□□□□□ -0.46
DDX41-216ENST00000513562 DNASE1L2Q92874 299 aa12.19□□□□□ -0.46
DDX41-216ENST00000513562 RNF26Q9BY78 433 aaPredicted RBP12.19□□□□□ -0.46
DDX41-216ENST00000513562 C22orf23Q9BZE7 217 aa12.19□□□□□ -0.46
DDX41-216ENST00000513562 TRIM6Q9C030 488 aaPredicted RBP12.19□□□□□ -0.46
DDX41-216ENST00000513562 BMP2KQ9NSY1 1161 aaPredicted RBP12.19□□□□□ -0.46
DDX41-216ENST00000513562 SEMA4GQ9NTN9 838 aa12.19□□□□□ -0.46
DDX41-216ENST00000513562 HCFC1R1Q9NWW0 138 aa12.19□□□□□ -0.46
DDX41-216ENST00000513562 GDE1Q9NZC3 331 aa12.19□□□□□ -0.46
DDX41-216ENST00000513562 DNMT3BQ9UBC3 853 aaKnown RBP12.19□□□□□ -0.46
DDX41-216ENST00000513562 CACNG4Q9UBN1 327 aa12.19□□□□□ -0.46
DDX41-216ENST00000513562 VAV3Q9UKW4 847 aa12.19□□□□□ -0.46
DDX41-216ENST00000513562 KIF4AO95239 1232 aa12.18□□□□□ -0.46
DDX41-216ENST00000513562 P4HBP07237 508 aaKnown RBP12.18□□□□□ -0.46
DDX41-216ENST00000513562 AKAP17AQ02040 695 aaKnown RBP12.18□□□□□ -0.46
DDX41-216ENST00000513562 MBTD1Q05BQ5 628 aa12.18□□□□□ -0.46
DDX41-216ENST00000513562 NCBP1Q09161 790 aaKnown RBP12.18□□□□□ -0.46
DDX41-216ENST00000513562 PPP2R5CQ13362 524 aa12.18□□□□□ -0.46
DDX41-216ENST00000513562 PPP2R5DQ14738 602 aa12.18□□□□□ -0.46
DDX41-216ENST00000513562 NTRK3Q16288 839 aa12.18□□□□□ -0.46
DDX41-216ENST00000513562 CSRP2Q16527 193 aa12.18□□□□□ -0.46
DDX41-216ENST00000513562 UVSSAQ2YD98 709 aa12.18□□□□□ -0.46
DDX41-216ENST00000513562 AXDND1Q5T1B0 1012 aaPredicted RBP12.18□□□□□ -0.46
DDX41-216ENST00000513562 FAM171A1Q5VUB5 890 aa12.18□□□□□ -0.46
DDX41-216ENST00000513562 PRR23CQ6ZRP0 262 aa12.18□□□□□ -0.46
DDX41-216ENST00000513562 RTL10Q7L3V2 364 aa12.18□□□□□ -0.46
DDX41-216ENST00000513562 ING5Q8WYH8 240 aa12.18□□□□□ -0.46
DDX41-216ENST00000513562 ELSPBP1Q96BH3 223 aa12.18□□□□□ -0.46
DDX41-216ENST00000513562 PAAF1Q9BRP4 392 aa12.18□□□□□ -0.46
DDX41-216ENST00000513562 PLA2G2FQ9BZM2 168 aa12.18□□□□□ -0.46
DDX41-216ENST00000513562 SH3GLB2Q9NR46 395 aa12.18□□□□□ -0.46
DDX41-216ENST00000513562 ANGPTL2Q9UKU9 493 aa12.18□□□□□ -0.46
DDX41-216ENST00000513562 MIA3Q5JRA6 1907 aa12.17□□□□□ -0.46
DDX41-216ENST00000513562 INO80B-WBP1J3KQ70 363 aa12.17□□□□□ -0.46
DDX41-216ENST00000513562 M0R2N6 131 aa12.17□□□□□ -0.46
DDX41-216ENST00000513562 MAN2B1O00754 1011 aa12.17□□□□□ -0.46
DDX41-216ENST00000513562 HMGB1P09429 215 aaKnown RBP12.17□□□□□ -0.46
DDX41-216ENST00000513562 ARF4P18085 180 aaPredicted RBP12.17□□□□□ -0.46
DDX41-216ENST00000513562 PMLP29590 882 aa12.17□□□□□ -0.46
DDX41-216ENST00000513562 YWHABP31946 246 aaKnown RBP12.17□□□□□ -0.46
DDX41-216ENST00000513562 CCR3P51677 355 aa12.17□□□□□ -0.46
DDX41-216ENST00000513562 POU5F1BQ06416 359 aa12.17□□□□□ -0.46
DDX41-216ENST00000513562 TUSC3Q13454 348 aa12.17□□□□□ -0.46
DDX41-216ENST00000513562 RAB33AQ14088 237 aa12.17□□□□□ -0.46
DDX41-216ENST00000513562 KRT32Q14532 448 aa12.17□□□□□ -0.46
DDX41-216ENST00000513562 MXD4Q14582 209 aaPredicted RBP12.17□□□□□ -0.46
DDX41-216ENST00000513562 SLC5A9Q2M3M2 681 aa12.17□□□□□ -0.46
DDX41-216ENST00000513562 PDXDC1Q6P996 788 aa12.17□□□□□ -0.46
DDX41-216ENST00000513562 POTEHQ6S545 545 aa12.17□□□□□ -0.46
DDX41-216ENST00000513562 PRR23BQ6ZRT6 265 aa12.17□□□□□ -0.46
DDX41-216ENST00000513562 CEP57Q86XR8 500 aa12.17□□□□□ -0.46
DDX41-216ENST00000513562 C4orf19Q8IY42 314 aa12.17□□□□□ -0.46
DDX41-216ENST00000513562 HASPINQ8TF76 798 aa12.17□□□□□ -0.46
DDX41-216ENST00000513562 DDX1Q92499 740 aaKnown RBP12.17□□□□□ -0.46
DDX41-216ENST00000513562 MTRQ99707 1265 aa12.17□□□□□ -0.46
DDX41-216ENST00000513562 LXNQ9BS40 222 aa12.17□□□□□ -0.46
DDX41-216ENST00000513562 SLC26A6Q9BXS9 759 aa12.17□□□□□ -0.46
DDX41-216ENST00000513562 AVENQ9NQS1 362 aaPredicted RBP12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms