RNA–Protein interactions for RNA: ENST00000513538.1

TCOF1-212, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 5

Gene TCOF1, Length 701 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-212ENST00000513538 TPH2Q8IWU9 490 aa10.72□□□□□ -0.69
TCOF1-212ENST00000513538 EXOC8Q8IYI6 725 aa10.72□□□□□ -0.69
TCOF1-212ENST00000513538 GPR65Q8IYL9 337 aa10.72□□□□□ -0.69
TCOF1-212ENST00000513538 KIAA2013Q8IYS2 634 aa10.72□□□□□ -0.69
TCOF1-212ENST00000513538 DCLK2Q8N568 766 aa10.72□□□□□ -0.69
TCOF1-212ENST00000513538 HASPINQ8TF76 798 aa10.72□□□□□ -0.69
TCOF1-212ENST00000513538 TNFRSF25Q93038 417 aa10.72□□□□□ -0.69
TCOF1-212ENST00000513538 EIF2AK1Q9BQI3 630 aaKnown RBP10.72□□□□□ -0.69
TCOF1-212ENST00000513538 COLEC11Q9BWP8 271 aa10.72□□□□□ -0.69
TCOF1-212ENST00000513538 PLEKHA4Q9H4M7 779 aa10.72□□□□□ -0.69
TCOF1-212ENST00000513538 PIDD1Q9HB75 910 aa10.72□□□□□ -0.69
TCOF1-212ENST00000513538 FBXW11Q9UKB1 542 aa10.72□□□□□ -0.69
TCOF1-212ENST00000513538 ADAM28Q9UKQ2 775 aa10.72□□□□□ -0.69
TCOF1-212ENST00000513538 GIT1Q9Y2X7 761 aa10.72□□□□□ -0.69
TCOF1-212ENST00000513538 CYP46A1Q9Y6A2 500 aa10.72□□□□□ -0.69
TCOF1-212ENST00000513538 PTGESO14684 152 aa10.71□□□□□ -0.69
TCOF1-212ENST00000513538 REC8O95072 547 aa10.71□□□□□ -0.69
TCOF1-212ENST00000513538 LYPLA2O95372 231 aa10.71□□□□□ -0.69
TCOF1-212ENST00000513538 C1RP00736 705 aa10.71□□□□□ -0.69
TCOF1-212ENST00000513538 IGFBP6P24592 240 aaPredicted RBP10.71□□□□□ -0.69
TCOF1-212ENST00000513538 GPC5P78333 572 aa10.71□□□□□ -0.69
TCOF1-212ENST00000513538 TFDP1Q14186 410 aa10.71□□□□□ -0.69
TCOF1-212ENST00000513538 MXD4Q14582 209 aaPredicted RBP10.71□□□□□ -0.69
TCOF1-212ENST00000513538 PCBP1Q15365 356 aaKnown RBP eCLIP10.71□□□□□ -0.69
TCOF1-212ENST00000513538 USP41Q3LFD5 358 aa10.71□□□□□ -0.69
TCOF1-212ENST00000513538 ELMSAN1Q6PJG2 1045 aa10.71□□□□□ -0.69
TCOF1-212ENST00000513538 DCLRE1AQ6PJP8 1040 aa10.71□□□□□ -0.69
TCOF1-212ENST00000513538 GRASPQ7Z6J2 395 aaPredicted RBP10.71□□□□□ -0.69
TCOF1-212ENST00000513538 C1orf210Q8IVY1 113 aa10.71□□□□□ -0.69
TCOF1-212ENST00000513538 PJA1Q8NG27 643 aa10.71□□□□□ -0.69
TCOF1-212ENST00000513538 KCNG4Q8TDN1 519 aa10.71□□□□□ -0.69
TCOF1-212ENST00000513538 NXPE3Q969Y0 559 aa10.71□□□□□ -0.69
TCOF1-212ENST00000513538 HSD17B14Q9BPX1 270 aa10.71□□□□□ -0.69
TCOF1-212ENST00000513538 CLSTN3Q9BQT9 956 aa10.71□□□□□ -0.69
TCOF1-212ENST00000513538 POLR3FQ9H1D9 316 aaPredicted RBP10.71□□□□□ -0.69
TCOF1-212ENST00000513538 GPRC5CQ9NQ84 441 aa10.71□□□□□ -0.69
TCOF1-212ENST00000513538 STK36Q9NRP7 1315 aa10.71□□□□□ -0.69
TCOF1-212ENST00000513538 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP10.71□□□□□ -0.69
TCOF1-212ENST00000513538 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP10.71□□□□□ -0.69
TCOF1-212ENST00000513538 ZMYM2Q9UBW7 1377 aa10.71□□□□□ -0.69
TCOF1-212ENST00000513538 DPP7Q9UHL4 492 aa10.71□□□□□ -0.69
TCOF1-212ENST00000513538 SIT1Q9Y3P8 196 aa10.71□□□□□ -0.69
TCOF1-212ENST00000513538 COL4A2P08572 1712 aa10.7□□□□□ -0.7
TCOF1-212ENST00000513538 A0A1B0GUA9 196 aa10.7□□□□□ -0.7
TCOF1-212ENST00000513538 CASTOR2A6NHX0 329 aa10.7□□□□□ -0.7
TCOF1-212ENST00000513538 KIF4AO95239 1232 aa10.7□□□□□ -0.7
TCOF1-212ENST00000513538 EDN1P05305 212 aa10.7□□□□□ -0.7
TCOF1-212ENST00000513538 RFX1P22670 979 aa10.7□□□□□ -0.7
TCOF1-212ENST00000513538 FSHRP23945 695 aa10.7□□□□□ -0.7
TCOF1-212ENST00000513538 RARRES1P49788 294 aa10.7□□□□□ -0.7
TCOF1-212ENST00000513538 STARD6P59095 220 aa10.7□□□□□ -0.7
TCOF1-212ENST00000513538 POU5F1BQ06416 359 aa10.7□□□□□ -0.7
TCOF1-212ENST00000513538 HSP90AA2PQ14568 343 aaPredicted RBP10.7□□□□□ -0.7
TCOF1-212ENST00000513538 NAB2Q15742 525 aa10.7□□□□□ -0.7
TCOF1-212ENST00000513538 SLC27A1Q6PCB7 646 aa10.7□□□□□ -0.7
TCOF1-212ENST00000513538 POTEHQ6S545 545 aa10.7□□□□□ -0.7
TCOF1-212ENST00000513538 SUMF1Q8NBK3 374 aa10.7□□□□□ -0.7
TCOF1-212ENST00000513538 LNX1Q8TBB1 728 aaPredicted RBP10.7□□□□□ -0.7
TCOF1-212ENST00000513538 PIGOQ8TEQ8 1089 aa10.7□□□□□ -0.7
TCOF1-212ENST00000513538 BSNDQ8WZ55 320 aa10.7□□□□□ -0.7
TCOF1-212ENST00000513538 DDX23Q9BUQ8 820 aaKnown RBP10.7□□□□□ -0.7
TCOF1-212ENST00000513538 NFKBIZQ9BYH8 718 aa10.7□□□□□ -0.7
TCOF1-212ENST00000513538 TM6SF1Q9BZW5 370 aa10.7□□□□□ -0.7
TCOF1-212ENST00000513538 TRIM6Q9C030 488 aaPredicted RBP10.7□□□□□ -0.7
TCOF1-212ENST00000513538 SEMA4AQ9H3S1 761 aa10.7□□□□□ -0.7
TCOF1-212ENST00000513538 PARP2Q9UGN5 583 aa10.7□□□□□ -0.7
TCOF1-212ENST00000513538 TPCN1Q9ULQ1 816 aa10.7□□□□□ -0.7
TCOF1-212ENST00000513538 USP20Q9Y2K6 914 aa10.7□□□□□ -0.7
TCOF1-212ENST00000513538 MTF2Q9Y483 593 aaPredicted RBP10.7□□□□□ -0.7
TCOF1-212ENST00000513538 NCOR2Q9Y618 2525 aa10.69□□□□□ -0.7
TCOF1-212ENST00000513538 SF3B1O75533 1304 aaKnown RBP eCLIP10.69□□□□□ -0.7
TCOF1-212ENST00000513538 CCL16O15467 120 aa10.69□□□□□ -0.7
TCOF1-212ENST00000513538 USO1O60763 962 aaKnown RBP10.69□□□□□ -0.7
TCOF1-212ENST00000513538 NR1I2O75469 434 aa10.69□□□□□ -0.7
TCOF1-212ENST00000513538 TADA2AO75478 443 aa10.69□□□□□ -0.7
TCOF1-212ENST00000513538 DGAT1O75907 488 aa10.69□□□□□ -0.7
TCOF1-212ENST00000513538 C8AP07357 584 aa10.69□□□□□ -0.7
TCOF1-212ENST00000513538 FDPSP14324 419 aaKnown RBP10.69□□□□□ -0.7
TCOF1-212ENST00000513538 TUSC3Q13454 348 aa10.69□□□□□ -0.7
TCOF1-212ENST00000513538 SNW1Q13573 536 aaKnown RBP10.69□□□□□ -0.7
TCOF1-212ENST00000513538 PSMD5Q16401 504 aa10.69□□□□□ -0.7
TCOF1-212ENST00000513538 FAM171A1Q5VUB5 890 aa10.69□□□□□ -0.7
TCOF1-212ENST00000513538 CPLX2Q6PUV4 134 aaKnown RBP10.69□□□□□ -0.7
TCOF1-212ENST00000513538 RSPO2Q6UXX9 243 aaPredicted RBP10.69□□□□□ -0.7
TCOF1-212ENST00000513538 SLFN12Q8IYM2 578 aa10.69□□□□□ -0.7
TCOF1-212ENST00000513538 ITFG1Q8TB96 612 aa10.69□□□□□ -0.7
TCOF1-212ENST00000513538 PIK3R5Q8WYR1 880 aa10.69□□□□□ -0.7
TCOF1-212ENST00000513538 FGF13Q92913 245 aa10.69□□□□□ -0.7
TCOF1-212ENST00000513538 TTPALQ9BTX7 342 aa10.69□□□□□ -0.7
TCOF1-212ENST00000513538 ANKEF1Q9NU02 776 aa10.69□□□□□ -0.7
TCOF1-212ENST00000513538 PDRG1Q9NUG6 133 aa10.69□□□□□ -0.7
TCOF1-212ENST00000513538 HCFC1R1Q9NWW0 138 aa10.69□□□□□ -0.7
TCOF1-212ENST00000513538 CDH7Q9ULB5 785 aa10.69□□□□□ -0.7
TCOF1-212ENST00000513538 LRRIQ4A6NIV6 560 aa10.68□□□□□ -0.7
TCOF1-212ENST00000513538 SHISA7A6NL88 538 aa10.68□□□□□ -0.7
TCOF1-212ENST00000513538 MARCH6O60337 910 aa10.68□□□□□ -0.7
TCOF1-212ENST00000513538 PFKFB2O60825 505 aa10.68□□□□□ -0.7
TCOF1-212ENST00000513538 RECQL4O94761 1208 aa10.68□□□□□ -0.7
TCOF1-212ENST00000513538 CREMQ03060 361 aa10.68□□□□□ -0.7
TCOF1-212ENST00000513538 EEF1DP3Q658K8 133 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms