RNA–Protein interactions for RNA: ENST00000513284.5

RNF4-218, Transcript of ring finger protein 4, humanhuman

TSL 4

Gene RNF4, Length 517 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-218ENST00000513284 LMAN1LQ9HAT1 526 aa12.52□□□□□ -0.41
RNF4-218ENST00000513284 ADAM28Q9UKQ2 775 aa12.52□□□□□ -0.41
RNF4-218ENST00000513284 RAB23Q9ULC3 237 aa12.52□□□□□ -0.41
RNF4-218ENST00000513284 NDRG2Q9UN36 371 aaKnown RBP12.52□□□□□ -0.41
RNF4-218ENST00000513284 RALGAPA1Q6GYQ0 2036 aa12.52□□□□□ -0.41
RNF4-218ENST00000513284 WDFY3Q8IZQ1 3526 aa12.51□□□□□ -0.41
RNF4-218ENST00000513284 NBEAQ8NFP9 2946 aa12.51□□□□□ -0.41
RNF4-218ENST00000513284 ANKRD11Q6UB99 2663 aaPredicted RBP12.51□□□□□ -0.41
RNF4-218ENST00000513284 C1QTNF9BB2RNN3 333 aa12.51□□□□□ -0.41
RNF4-218ENST00000513284 CHURC1-FNTBB4DL54 471 aa12.51□□□□□ -0.41
RNF4-218ENST00000513284 C1QTNF9P0C862 333 aa12.51□□□□□ -0.41
RNF4-218ENST00000513284 KCNA4P22459 653 aa12.51□□□□□ -0.41
RNF4-218ENST00000513284 FCARP24071 287 aa12.51□□□□□ -0.41
RNF4-218ENST00000513284 IGFBP6P24592 240 aaPredicted RBP12.51□□□□□ -0.41
RNF4-218ENST00000513284 HOXA9P31269 272 aa12.51□□□□□ -0.41
RNF4-218ENST00000513284 FNTBP49356 437 aa12.51□□□□□ -0.41
RNF4-218ENST00000513284 LAMTOR4Q0VGL1 99 aa12.51□□□□□ -0.41
RNF4-218ENST00000513284 SLC5A9Q2M3M2 681 aa12.51□□□□□ -0.41
RNF4-218ENST00000513284 PPM1LQ5SGD2 360 aa12.51□□□□□ -0.41
RNF4-218ENST00000513284 LRCH2Q5VUJ6 765 aa12.51□□□□□ -0.41
RNF4-218ENST00000513284 CREB3L3Q68CJ9 461 aa12.51□□□□□ -0.41
RNF4-218ENST00000513284 CNNM3Q8NE01 707 aa12.51□□□□□ -0.41
RNF4-218ENST00000513284 CPB2Q96IY4 423 aa12.51□□□□□ -0.41
RNF4-218ENST00000513284 CCDC136Q96JN2 1154 aa12.51□□□□□ -0.41
RNF4-218ENST00000513284 TCEANC2Q96MN5 208 aa12.51□□□□□ -0.41
RNF4-218ENST00000513284 TEKT3Q9BXF9 490 aa12.51□□□□□ -0.41
RNF4-218ENST00000513284 WRAP73Q9P2S5 460 aaPredicted RBP12.51□□□□□ -0.41
RNF4-218ENST00000513284 KCNH3Q9ULD8 1083 aa12.51□□□□□ -0.41
RNF4-218ENST00000513284 POLIQ9UNA4 740 aa12.51□□□□□ -0.41
RNF4-218ENST00000513284 TSPAN1O60635 241 aa12.5□□□□□ -0.41
RNF4-218ENST00000513284 TADA2AO75478 443 aa12.5□□□□□ -0.41
RNF4-218ENST00000513284 POU2F2P09086 479 aa12.5□□□□□ -0.41
RNF4-218ENST00000513284 CHRNB1P11230 501 aa12.5□□□□□ -0.41
RNF4-218ENST00000513284 AKAP5P24588 427 aa12.5□□□□□ -0.41
RNF4-218ENST00000513284 LIMK1P53667 647 aa12.5□□□□□ -0.41
RNF4-218ENST00000513284 SF3A2Q15428 464 aaKnown RBP12.5□□□□□ -0.41
RNF4-218ENST00000513284 AMHR2Q16671 573 aa12.5□□□□□ -0.41
RNF4-218ENST00000513284 WDR44Q5JSH3 913 aa12.5□□□□□ -0.41
RNF4-218ENST00000513284 AXDND1Q5T1B0 1012 aaPredicted RBP12.5□□□□□ -0.41
RNF4-218ENST00000513284 SYNE3Q6ZMZ3 975 aa12.5□□□□□ -0.41
RNF4-218ENST00000513284 MIER3Q7Z3K6 550 aa12.5□□□□□ -0.41
RNF4-218ENST00000513284 REXO1Q8N1G1 1221 aaKnown RBP12.5□□□□□ -0.41
RNF4-218ENST00000513284 RDM1Q8NG50 284 aa12.5□□□□□ -0.41
RNF4-218ENST00000513284 SLC7A14Q8TBB6 771 aa12.5□□□□□ -0.41
RNF4-218ENST00000513284 PIK3R5Q8WYR1 880 aa12.5□□□□□ -0.41
RNF4-218ENST00000513284 DDX1Q92499 740 aaKnown RBP12.5□□□□□ -0.41
RNF4-218ENST00000513284 CXCL16Q9H2A7 254 aa12.5□□□□□ -0.41
RNF4-218ENST00000513284 DHX33Q9H6R0 707 aaKnown RBP12.5□□□□□ -0.41
RNF4-218ENST00000513284 C2orf42Q9NWW7 574 aa12.5□□□□□ -0.41
RNF4-218ENST00000513284 KLK14Q9P0G3 267 aa12.5□□□□□ -0.41
RNF4-218ENST00000513284 ZMIZ1Q9ULJ6 1067 aa12.5□□□□□ -0.41
RNF4-218ENST00000513284 MRPS17Q9Y2R5 130 aaKnown RBP12.5□□□□□ -0.41
RNF4-218ENST00000513284 GIT1Q9Y2X7 761 aa12.5□□□□□ -0.41
RNF4-218ENST00000513284 TDRD15B5MCY1 1934 aaKnown RBP12.5□□□□□ -0.41
RNF4-218ENST00000513284 DMXL2Q8TDJ6 3036 aa12.5□□□□□ -0.41
RNF4-218ENST00000513284 K7ESF4 209 aa12.49□□□□□ -0.41
RNF4-218ENST00000513284 EML1O00423 815 aa12.49□□□□□ -0.41
RNF4-218ENST00000513284 ZBTB43O43298 467 aa12.49□□□□□ -0.41
RNF4-218ENST00000513284 NR1I2O75469 434 aa12.49□□□□□ -0.41
RNF4-218ENST00000513284 CXCL12P48061 93 aa12.49□□□□□ -0.41
RNF4-218ENST00000513284 USP11P51784 963 aa12.49□□□□□ -0.41
RNF4-218ENST00000513284 RAB33AQ14088 237 aa12.49□□□□□ -0.41
RNF4-218ENST00000513284 UVSSAQ2YD98 709 aa12.49□□□□□ -0.41
RNF4-218ENST00000513284 PABPC1LQ4VXU2 614 aaKnown RBP12.49□□□□□ -0.41
RNF4-218ENST00000513284 FAM171A1Q5VUB5 890 aa12.49□□□□□ -0.41
RNF4-218ENST00000513284 MAP4K3Q8IVH8 894 aa12.49□□□□□ -0.41
RNF4-218ENST00000513284 FAM160A2Q8N612 972 aaPredicted RBP12.49□□□□□ -0.41
RNF4-218ENST00000513284 KDF1Q8NAX2 398 aaPredicted RBP12.49□□□□□ -0.41
RNF4-218ENST00000513284 ELSPBP1Q96BH3 223 aa12.49□□□□□ -0.41
RNF4-218ENST00000513284 TTPALQ9BTX7 342 aa12.49□□□□□ -0.41
RNF4-218ENST00000513284 APOL6Q9BWW8 343 aa12.49□□□□□ -0.41
RNF4-218ENST00000513284 TMEM121BQ9BXQ6 578 aaPredicted RBP12.49□□□□□ -0.41
RNF4-218ENST00000513284 CSRNP2Q9H175 543 aa12.49□□□□□ -0.41
RNF4-218ENST00000513284 NXF3Q9H4D5 531 aaKnown RBP12.49□□□□□ -0.41
RNF4-218ENST00000513284 C6orf50Q9HD87 102 aa12.49□□□□□ -0.41
RNF4-218ENST00000513284 WASF3Q9UPY6 502 aa12.49□□□□□ -0.41
RNF4-218ENST00000513284 SDK1Q7Z5N4 2213 aa12.49□□□□□ -0.41
RNF4-218ENST00000513284 COL4A2P08572 1712 aa12.48□□□□□ -0.41
RNF4-218ENST00000513284 AKAP13Q12802 2813 aa12.48□□□□□ -0.41
RNF4-218ENST00000513284 MAN2B1O00754 1011 aa12.48□□□□□ -0.41
RNF4-218ENST00000513284 ZBTB39O15060 712 aa12.48□□□□□ -0.41
RNF4-218ENST00000513284 XYLBO75191 536 aa12.48□□□□□ -0.41
RNF4-218ENST00000513284 CEBPBP17676 345 aa12.48□□□□□ -0.41
RNF4-218ENST00000513284 CCR3P51677 355 aa12.48□□□□□ -0.41
RNF4-218ENST00000513284 PTENP60484 403 aa12.48□□□□□ -0.41
RNF4-218ENST00000513284 CREMQ03060 361 aa12.48□□□□□ -0.41
RNF4-218ENST00000513284 GRM2Q14416 872 aa12.48□□□□□ -0.41
RNF4-218ENST00000513284 CCDC6Q16204 474 aa12.48□□□□□ -0.41
RNF4-218ENST00000513284 PSMD5Q16401 504 aa12.48□□□□□ -0.41
RNF4-218ENST00000513284 Q4G0T1 1027 aa12.48□□□□□ -0.41
RNF4-218ENST00000513284 LIN9Q5TKA1 542 aa12.48□□□□□ -0.41
RNF4-218ENST00000513284 FERMT3Q86UX7 667 aa12.48□□□□□ -0.41
RNF4-218ENST00000513284 CDR2LQ86X02 465 aaPredicted RBP12.48□□□□□ -0.41
RNF4-218ENST00000513284 RNF149Q8NC42 400 aa12.48□□□□□ -0.41
RNF4-218ENST00000513284 HASPINQ8TF76 798 aa12.48□□□□□ -0.41
RNF4-218ENST00000513284 FAM3CQ92520 227 aa12.48□□□□□ -0.41
RNF4-218ENST00000513284 DNASE1L2Q92874 299 aa12.48□□□□□ -0.41
RNF4-218ENST00000513284 ZNF334Q9HCZ1 680 aaPredicted RBP12.48□□□□□ -0.41
RNF4-218ENST00000513284 GDE1Q9NZC3 331 aa12.48□□□□□ -0.41
RNF4-218ENST00000513284 MRPS23Q9Y3D9 190 aaKnown RBP12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms