RNA–Protein interactions for RNA: ENST00000513143.5

PDPN-210, Transcript of podoplanin, humanhuman

TSL 1 (best) BASIC

Gene PDPN, Length 1,305 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-210ENST00000513143 ZNF233A6NK53 670 aa13.64□□□□□ -0.23
PDPN-210ENST00000513143 ZNF623O75123 536 aa13.64□□□□□ -0.23
PDPN-210ENST00000513143 EPB41P11171 864 aaKnown RBP13.64□□□□□ -0.23
PDPN-210ENST00000513143 GRM5P41594 1212 aa13.64□□□□□ -0.23
PDPN-210ENST00000513143 ACOT2P49753 483 aa13.64□□□□□ -0.23
PDPN-210ENST00000513143 MCCD1P59942 119 aaPredicted RBP13.64□□□□□ -0.23
PDPN-210ENST00000513143 TCP11X2Q5H9J9 407 aa13.64□□□□□ -0.23
PDPN-210ENST00000513143 ZBTB41Q5SVQ8 909 aa13.64□□□□□ -0.23
PDPN-210ENST00000513143 DEFB128Q7Z7B8 93 aa13.64□□□□□ -0.23
PDPN-210ENST00000513143 RTN4RL1Q86UN2 441 aaPredicted RBP13.64□□□□□ -0.23
PDPN-210ENST00000513143 CBWD2Q8IUF1 395 aa13.64□□□□□ -0.23
PDPN-210ENST00000513143 FAM186BQ8IYM0 893 aa13.64□□□□□ -0.23
PDPN-210ENST00000513143 CEP120Q8N960 986 aa13.64□□□□□ -0.23
PDPN-210ENST00000513143 RDH13Q8NBN7 331 aa13.64□□□□□ -0.23
PDPN-210ENST00000513143 CNOT6LQ96LI5 555 aaKnown RBP13.64□□□□□ -0.23
PDPN-210ENST00000513143 MFSD14AQ96MC6 490 aa13.64□□□□□ -0.23
PDPN-210ENST00000513143 TRIM6Q9C030 488 aaPredicted RBP13.64□□□□□ -0.23
PDPN-210ENST00000513143 METTL14Q9HCE5 456 aaKnown RBP13.64□□□□□ -0.23
PDPN-210ENST00000513143 RGS18Q9NS28 235 aa13.64□□□□□ -0.23
PDPN-210ENST00000513143 FAM105AQ9NUU6 356 aa13.64□□□□□ -0.23
PDPN-210ENST00000513143 MAGEC2Q9UBF1 373 aaPredicted RBP13.64□□□□□ -0.23
PDPN-210ENST00000513143 PCDHB2Q9Y5E7 798 aa13.64□□□□□ -0.23
PDPN-210ENST00000513143 A0A0U1RQF3 1178 aa13.64□□□□□ -0.23
PDPN-210ENST00000513143 FSD2A1L4K1 749 aa13.64□□□□□ -0.23
PDPN-210ENST00000513143 KCNJ18B7U540 433 aa13.64□□□□□ -0.23
PDPN-210ENST00000513143 C9IYK1 514 aa13.64□□□□□ -0.23
PDPN-210ENST00000513143 ADRB2P07550 413 aa13.64□□□□□ -0.23
PDPN-210ENST00000513143 PFKMP08237 780 aa13.64□□□□□ -0.23
PDPN-210ENST00000513143 CLTAP09496 248 aa13.64□□□□□ -0.23
PDPN-210ENST00000513143 STAG3L1P0CL83 205 aa13.64□□□□□ -0.23
PDPN-210ENST00000513143 SKIP12755 728 aa13.64□□□□□ -0.23
PDPN-210ENST00000513143 ATP1A3P13637 1013 aa13.64□□□□□ -0.23
PDPN-210ENST00000513143 CSF2RAP15509 400 aa13.64□□□□□ -0.23
PDPN-210ENST00000513143 EEF1GP26641 437 aaKnown RBP13.64□□□□□ -0.23
PDPN-210ENST00000513143 TNFSF9P41273 254 aa13.64□□□□□ -0.23
PDPN-210ENST00000513143 RAB27AP51159 221 aa13.64□□□□□ -0.23
PDPN-210ENST00000513143 SPAG1Q07617 926 aa13.64□□□□□ -0.23
PDPN-210ENST00000513143 KCNJ12Q14500 433 aa13.64□□□□□ -0.23
PDPN-210ENST00000513143 TCTN1Q2MV58 587 aa13.64□□□□□ -0.23
PDPN-210ENST00000513143 UVSSAQ2YD98 709 aa13.64□□□□□ -0.23
PDPN-210ENST00000513143 CCDC40Q4G0X9 1142 aa13.64□□□□□ -0.23
PDPN-210ENST00000513143 SEZ6Q53EL9 994 aa13.64□□□□□ -0.23
PDPN-210ENST00000513143 HSP90AA4PQ58FG1 418 aa13.64□□□□□ -0.23
PDPN-210ENST00000513143 CNKSR3Q6P9H4 555 aa13.64□□□□□ -0.23
PDPN-210ENST00000513143 MRPL10Q7Z7H8 261 aaKnown RBP13.64□□□□□ -0.23
PDPN-210ENST00000513143 TMEM192Q8IY95 271 aa13.64□□□□□ -0.23
PDPN-210ENST00000513143 RPUSD2Q8IZ73 545 aaKnown RBP13.64□□□□□ -0.23
PDPN-210ENST00000513143 SMG8Q8ND04 991 aaKnown RBP13.64□□□□□ -0.23
PDPN-210ENST00000513143 LINC01599Q8WXQ3 324 aa13.64□□□□□ -0.23
PDPN-210ENST00000513143 ACAP3Q96P50 834 aa13.64□□□□□ -0.23
PDPN-210ENST00000513143 CCDC94Q9BW85 323 aaPredicted RBP13.64□□□□□ -0.23
PDPN-210ENST00000513143 TSPYL2Q9H2G4 693 aaPredicted RBP13.64□□□□□ -0.23
PDPN-210ENST00000513143 NXF3Q9H4D5 531 aaKnown RBP13.64□□□□□ -0.23
PDPN-210ENST00000513143 C1orf112Q9NSG2 853 aa13.64□□□□□ -0.23
PDPN-210ENST00000513143 ARMCX3Q9UH62 379 aaPredicted RBP13.64□□□□□ -0.23
PDPN-210ENST00000513143 LIMA1Q9UHB6 759 aaKnown RBP13.64□□□□□ -0.23
PDPN-210ENST00000513143 IPPQ9Y573 584 aa13.64□□□□□ -0.23
PDPN-210ENST00000513143 TTC3P53804 2025 aa13.63□□□□□ -0.23
PDPN-210ENST00000513143 PDCD11Q14690 1871 aaKnown RBP13.63□□□□□ -0.23
PDPN-210ENST00000513143 RALGAPA2Q2PPJ7 1873 aa13.63□□□□□ -0.23
PDPN-210ENST00000513143 LRRC10BA6NIK2 292 aa13.63□□□□□ -0.23
PDPN-210ENST00000513143 ENPP3O14638 875 aa13.63□□□□□ -0.23
PDPN-210ENST00000513143 CDK11BP21127 795 aaKnown RBP13.63□□□□□ -0.23
PDPN-210ENST00000513143 OSTNP61366 133 aa13.63□□□□□ -0.23
PDPN-210ENST00000513143 FAM189BP81408 668 aa13.63□□□□□ -0.23
PDPN-210ENST00000513143 ENPEPQ07075 957 aa13.63□□□□□ -0.23
PDPN-210ENST00000513143 CYP24A1Q07973 514 aa13.63□□□□□ -0.23
PDPN-210ENST00000513143 BFSP1Q12934 665 aa13.63□□□□□ -0.23
PDPN-210ENST00000513143 GSE1Q14687 1217 aa13.63□□□□□ -0.23
PDPN-210ENST00000513143 PSMD6Q15008 389 aa13.63□□□□□ -0.23
PDPN-210ENST00000513143 ENOX2Q16206 610 aaKnown RBP13.63□□□□□ -0.23
PDPN-210ENST00000513143 SLC24A5Q71RS6 500 aa13.63□□□□□ -0.23
PDPN-210ENST00000513143 INTS8Q75QN2 995 aaKnown RBP13.63□□□□□ -0.23
PDPN-210ENST00000513143 BRSK2Q8IWQ3 736 aa13.63□□□□□ -0.23
PDPN-210ENST00000513143 TRIM59Q8IWR1 403 aa13.63□□□□□ -0.23
PDPN-210ENST00000513143 TMC2Q8TDI7 906 aa13.63□□□□□ -0.23
PDPN-210ENST00000513143 DPF3Q92784 378 aa13.63□□□□□ -0.23
PDPN-210ENST00000513143 BADQ92934 168 aa13.63□□□□□ -0.23
PDPN-210ENST00000513143 RPF1Q9H9Y2 349 aaKnown RBP13.63□□□□□ -0.23
PDPN-210ENST00000513143 IL23AQ9NPF7 189 aa13.63□□□□□ -0.23
PDPN-210ENST00000513143 SNTG2Q9NY99 539 aa13.63□□□□□ -0.23
PDPN-210ENST00000513143 RBAKQ9NYW8 714 aaPredicted RBP13.63□□□□□ -0.23
PDPN-210ENST00000513143 HES2Q9Y543 173 aa13.63□□□□□ -0.23
PDPN-210ENST00000513143 GOLGA6L3A6NEY3 463 aa13.62□□□□□ -0.23
PDPN-210ENST00000513143 MEFVO15553 781 aaPredicted RBP13.62□□□□□ -0.23
PDPN-210ENST00000513143 CXCL8P10145 99 aa13.62□□□□□ -0.23
PDPN-210ENST00000513143 KRT13P13646 458 aa13.62□□□□□ -0.23
PDPN-210ENST00000513143 MTIF2P46199 727 aaKnown RBP13.62□□□□□ -0.23
PDPN-210ENST00000513143 VAMP7P51809 220 aa13.62□□□□□ -0.23
PDPN-210ENST00000513143 PPIGQ13427 754 aaKnown RBP eCLIP13.62□□□□□ -0.23
PDPN-210ENST00000513143 KRT31Q15323 416 aa13.62□□□□□ -0.23
PDPN-210ENST00000513143 SLC10A6Q3KNW5 377 aa13.62□□□□□ -0.23
PDPN-210ENST00000513143 APTXQ7Z2E3 356 aaKnown RBP13.62□□□□□ -0.23
PDPN-210ENST00000513143 ZNF598Q86UK7 904 aaKnown RBP13.62□□□□□ -0.23
PDPN-210ENST00000513143 ECHDC2Q86YB7 292 aa13.62□□□□□ -0.23
PDPN-210ENST00000513143 CREBRFQ8IUR6 639 aa13.62□□□□□ -0.23
PDPN-210ENST00000513143 HACE1Q8IYU2 909 aa13.62□□□□□ -0.23
PDPN-210ENST00000513143 ANKRD20A12PQ8NF67 263 aa13.62□□□□□ -0.23
PDPN-210ENST00000513143 PLEKHO2Q8TD55 490 aa13.62□□□□□ -0.23
PDPN-210ENST00000513143 PARD3BQ8TEW8 1205 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms