RNA–Protein interactions for RNA: ENST00000513119.5

CALCOCO2-221, Transcript of calcium binding and coiled-coil domain 2, humanhuman

TSL 5

Gene CALCOCO2, Length 973 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-221ENST00000513119 NT5C3AQ9H0P0 336 aa8.29□□□□□ -1.08
CALCOCO2-221ENST00000513119 DHX33Q9H6R0 707 aaKnown RBP8.29□□□□□ -1.08
CALCOCO2-221ENST00000513119 ARHGEF3Q9NR81 526 aa8.29□□□□□ -1.08
CALCOCO2-221ENST00000513119 CHST7Q9NS84 486 aa8.29□□□□□ -1.08
CALCOCO2-221ENST00000513119 DLL3Q9NYJ7 618 aa8.29□□□□□ -1.08
CALCOCO2-221ENST00000513119 KANSL3Q9P2N6 904 aa8.29□□□□□ -1.08
CALCOCO2-221ENST00000513119 VAV3Q9UKW4 847 aa8.29□□□□□ -1.08
CALCOCO2-221ENST00000513119 HES2Q9Y543 173 aa8.29□□□□□ -1.08
CALCOCO2-221ENST00000513119 COL4A3BPQ9Y5P4 624 aa8.29□□□□□ -1.08
CALCOCO2-221ENST00000513119 COL4A3Q01955 1670 aa8.28□□□□□ -1.08
CALCOCO2-221ENST00000513119 ARL5CA6NH57 179 aa8.28□□□□□ -1.08
CALCOCO2-221ENST00000513119 TGM5O43548 720 aa8.28□□□□□ -1.08
CALCOCO2-221ENST00000513119 HMGB1P09429 215 aaKnown RBP8.28□□□□□ -1.08
CALCOCO2-221ENST00000513119 SRGAP2CP0DJJ0 459 aa8.28□□□□□ -1.08
CALCOCO2-221ENST00000513119 LAMP2P13473 410 aa8.28□□□□□ -1.08
CALCOCO2-221ENST00000513119 PRKCSHP14314 528 aaPredicted RBP8.28□□□□□ -1.08
CALCOCO2-221ENST00000513119 RPL17P18621 184 aaKnown RBP8.28□□□□□ -1.08
CALCOCO2-221ENST00000513119 MLH1P40692 756 aa8.28□□□□□ -1.08
CALCOCO2-221ENST00000513119 OR1G1P47890 313 aa8.28□□□□□ -1.08
CALCOCO2-221ENST00000513119 SCNN1GP51170 649 aa8.28□□□□□ -1.08
CALCOCO2-221ENST00000513119 NONOQ15233 471 aaKnown RBP eCLIP8.28□□□□□ -1.08
CALCOCO2-221ENST00000513119 BMP2KLQ5H9B9 411 aa8.28□□□□□ -1.08
CALCOCO2-221ENST00000513119 SRGAP1Q7Z6B7 1085 aa8.28□□□□□ -1.08
CALCOCO2-221ENST00000513119 PALB2Q86YC2 1186 aa8.28□□□□□ -1.08
CALCOCO2-221ENST00000513119 C1orf210Q8IVY1 113 aa8.28□□□□□ -1.08
CALCOCO2-221ENST00000513119 SUMF1Q8NBK3 374 aa8.28□□□□□ -1.08
CALCOCO2-221ENST00000513119 GSTCDQ8NEC7 633 aa8.28□□□□□ -1.08
CALCOCO2-221ENST00000513119 CCDC148Q8NFR7 591 aa8.28□□□□□ -1.08
CALCOCO2-221ENST00000513119 PJA1Q8NG27 643 aa8.28□□□□□ -1.08
CALCOCO2-221ENST00000513119 NXPE3Q969Y0 559 aa8.28□□□□□ -1.08
CALCOCO2-221ENST00000513119 FAM193BQ96PV7 902 aaPredicted RBP8.28□□□□□ -1.08
CALCOCO2-221ENST00000513119 GAD1Q99259 594 aa8.28□□□□□ -1.08
CALCOCO2-221ENST00000513119 PRKD2Q9BZL6 878 aa8.28□□□□□ -1.08
CALCOCO2-221ENST00000513119 SH3GLB2Q9NR46 395 aa8.28□□□□□ -1.08
CALCOCO2-221ENST00000513119 SLC2A4RGQ9NR83 387 aa8.28□□□□□ -1.08
CALCOCO2-221ENST00000513119 CACNG4Q9UBN1 327 aa8.28□□□□□ -1.08
CALCOCO2-221ENST00000513119 SIT1Q9Y3P8 196 aa8.28□□□□□ -1.08
CALCOCO2-221ENST00000513119 IPPQ9Y573 584 aa8.28□□□□□ -1.08
CALCOCO2-221ENST00000513119 NUMBLQ9Y6R0 609 aa8.28□□□□□ -1.08
CALCOCO2-221ENST00000513119 DOCK6Q96HP0 2047 aa8.27□□□□□ -1.09
CALCOCO2-221ENST00000513119 ZBTB39O15060 712 aa8.27□□□□□ -1.09
CALCOCO2-221ENST00000513119 TSPAN1O60635 241 aa8.27□□□□□ -1.09
CALCOCO2-221ENST00000513119 CENPBP07199 599 aaPredicted RBP8.27□□□□□ -1.09
CALCOCO2-221ENST00000513119 ITGA4P13612 1032 aa8.27□□□□□ -1.09
CALCOCO2-221ENST00000513119 PDIA3P30101 505 aaKnown RBP8.27□□□□□ -1.09
CALCOCO2-221ENST00000513119 QARSP47897 775 aaKnown RBP8.27□□□□□ -1.09
CALCOCO2-221ENST00000513119 EVCP57679 992 aa8.27□□□□□ -1.09
CALCOCO2-221ENST00000513119 NLRP5P59047 1200 aa8.27□□□□□ -1.09
CALCOCO2-221ENST00000513119 STARD6P59095 220 aa8.27□□□□□ -1.09
CALCOCO2-221ENST00000513119 GPC5P78333 572 aa8.27□□□□□ -1.09
CALCOCO2-221ENST00000513119 CCT2P78371 535 aaKnown RBP8.27□□□□□ -1.09
CALCOCO2-221ENST00000513119 NTHL1P78549 312 aa8.27□□□□□ -1.09
CALCOCO2-221ENST00000513119 FGD1P98174 961 aa8.27□□□□□ -1.09
CALCOCO2-221ENST00000513119 PPP2R5CQ13362 524 aa8.27□□□□□ -1.09
CALCOCO2-221ENST00000513119 PUM1Q14671 1186 aaKnown RBP eCLIP8.27□□□□□ -1.091e-17■□□□□ 10.7
CALCOCO2-221ENST00000513119 KMT5BQ4FZB7 885 aa8.27□□□□□ -1.09
CALCOCO2-221ENST00000513119 DCLRE1AQ6PJP8 1040 aa8.27□□□□□ -1.09
CALCOCO2-221ENST00000513119 MOXD1Q6UVY6 613 aa8.27□□□□□ -1.09
CALCOCO2-221ENST00000513119 PARM1Q6UWI2 310 aa8.27□□□□□ -1.09
CALCOCO2-221ENST00000513119 GET4Q7L5D6 327 aaPredicted RBP8.27□□□□□ -1.09
CALCOCO2-221ENST00000513119 FERMT3Q86UX7 667 aa8.27□□□□□ -1.09
CALCOCO2-221ENST00000513119 RNF149Q8NC42 400 aa8.27□□□□□ -1.09
CALCOCO2-221ENST00000513119 HDAC7Q8WUI4 952 aa8.27□□□□□ -1.09
CALCOCO2-221ENST00000513119 PSPC1Q8WXF1 523 aaKnown RBP8.27□□□□□ -1.09
CALCOCO2-221ENST00000513119 SLC7A3Q8WY07 619 aa8.27□□□□□ -1.09
CALCOCO2-221ENST00000513119 RUBCNQ92622 972 aa8.27□□□□□ -1.09
CALCOCO2-221ENST00000513119 RABGGTAQ92696 567 aa8.27□□□□□ -1.09
CALCOCO2-221ENST00000513119 STAMQ92783 540 aa8.27□□□□□ -1.09
CALCOCO2-221ENST00000513119 CPB2Q96IY4 423 aa8.27□□□□□ -1.09
CALCOCO2-221ENST00000513119 CEP170P1Q96L14 293 aa8.27□□□□□ -1.09
CALCOCO2-221ENST00000513119 JAKMIP1Q96N16 626 aaKnown RBP8.27□□□□□ -1.09
CALCOCO2-221ENST00000513119 AIFM3Q96NN9 605 aa8.27□□□□□ -1.09
CALCOCO2-221ENST00000513119 JPH2Q9BR39 696 aaPredicted RBP8.27□□□□□ -1.09
CALCOCO2-221ENST00000513119 PLEKHA4Q9H4M7 779 aa8.27□□□□□ -1.09
CALCOCO2-221ENST00000513119 XPNPEP1Q9NQW7 623 aa8.27□□□□□ -1.09
CALCOCO2-221ENST00000513119 ZDHHC7Q9NXF8 308 aa8.27□□□□□ -1.09
CALCOCO2-221ENST00000513119 PCDHA4Q9UN74 947 aa8.27□□□□□ -1.09
CALCOCO2-221ENST00000513119 MTF2Q9Y483 593 aaPredicted RBP8.27□□□□□ -1.09
CALCOCO2-221ENST00000513119 PCDHB3Q9Y5E6 796 aa8.27□□□□□ -1.09
CALCOCO2-221ENST00000513119 SNX14Q9Y5W7 946 aa8.27□□□□□ -1.09
CALCOCO2-221ENST00000513119 CHD8Q9HCK8 2581 aa8.27□□□□□ -1.09
CALCOCO2-221ENST00000513119 FANCMQ8IYD8 2048 aa8.27□□□□□ -1.09
CALCOCO2-221ENST00000513119 GAS2O43903 313 aaKnown RBP8.26□□□□□ -1.09
CALCOCO2-221ENST00000513119 C1RP00736 705 aa8.26□□□□□ -1.09
CALCOCO2-221ENST00000513119 RFX1P22670 979 aa8.26□□□□□ -1.09
CALCOCO2-221ENST00000513119 RPS6KB1P23443 525 aa8.26□□□□□ -1.09
CALCOCO2-221ENST00000513119 HSPA4P34932 840 aa8.26□□□□□ -1.09
CALCOCO2-221ENST00000513119 RFC5P40937 340 aa8.26□□□□□ -1.09
CALCOCO2-221ENST00000513119 AKAP17AQ02040 695 aaKnown RBP8.26□□□□□ -1.09
CALCOCO2-221ENST00000513119 EMC2Q15006 297 aa8.26□□□□□ -1.09
CALCOCO2-221ENST00000513119 INF2Q27J81 1249 aa8.26□□□□□ -1.09
CALCOCO2-221ENST00000513119 RSPO4Q2I0M5 234 aaPredicted RBP8.26□□□□□ -1.09
CALCOCO2-221ENST00000513119 FUT10Q6P4F1 479 aa8.26□□□□□ -1.09
CALCOCO2-221ENST00000513119 ZC3H14Q6PJT7 736 aaKnown RBP8.26□□□□□ -1.09
CALCOCO2-221ENST00000513119 BLOC1S2Q6QNY1 142 aa8.26□□□□□ -1.09
CALCOCO2-221ENST00000513119 GLYCTKQ8IVS8 523 aa8.26□□□□□ -1.09
CALCOCO2-221ENST00000513119 GPR65Q8IYL9 337 aa8.26□□□□□ -1.09
CALCOCO2-221ENST00000513119 BLIDQ8IZY5 108 aa8.26□□□□□ -1.09
CALCOCO2-221ENST00000513119 DAGLBQ8NCG7 672 aa8.26□□□□□ -1.09
CALCOCO2-221ENST00000513119 ASAP3Q8TDY4 903 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms