RNA–Protein interactions for RNA: ENST00000512813.5

CLCN3-208, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 4

Gene CLCN3, Length 563 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-208ENST00000512813 PCSK4Q6UW60 755 aa10.63□□□□□ -0.71
CLCN3-208ENST00000512813 HOMER1Q86YM7 354 aa10.63□□□□□ -0.71
CLCN3-208ENST00000512813 COLGALT2Q8IYK4 626 aa10.63□□□□□ -0.71
CLCN3-208ENST00000512813 FAM181AQ8N9Y4 354 aa10.63□□□□□ -0.71
CLCN3-208ENST00000512813 SLC7A14Q8TBB6 771 aa10.63□□□□□ -0.71
CLCN3-208ENST00000512813 PGBD4Q96DM1 585 aa10.63□□□□□ -0.71
CLCN3-208ENST00000512813 ASB16Q96NS5 453 aa10.63□□□□□ -0.71
CLCN3-208ENST00000512813 RSAD1Q9HA92 442 aa10.63□□□□□ -0.71
CLCN3-208ENST00000512813 KCNK4Q9NYG8 393 aa10.63□□□□□ -0.71
CLCN3-208ENST00000512813 SLC8A2Q9UPR5 921 aa10.63□□□□□ -0.71
CLCN3-208ENST00000512813 FBN2P35556 2912 aa10.63□□□□□ -0.71
CLCN3-208ENST00000512813 VWA8A3KMH1 1905 aa10.62□□□□□ -0.71
CLCN3-208ENST00000512813 RELNP78509 3460 aa10.62□□□□□ -0.71
CLCN3-208ENST00000512813 TEX51A0A1B0GUA7 166 aa10.62□□□□□ -0.71
CLCN3-208ENST00000512813 F8W810 466 aa10.62□□□□□ -0.71
CLCN3-208ENST00000512813 PIK3CDO00329 1044 aa10.62□□□□□ -0.71
CLCN3-208ENST00000512813 ZNF263O14978 683 aa10.62□□□□□ -0.71
CLCN3-208ENST00000512813 RHOP08100 348 aa10.62□□□□□ -0.71
CLCN3-208ENST00000512813 CTHP32929 405 aa10.62□□□□□ -0.71
CLCN3-208ENST00000512813 OR1G1P47890 313 aa10.62□□□□□ -0.71
CLCN3-208ENST00000512813 SOX9P48436 509 aa10.62□□□□□ -0.71
CLCN3-208ENST00000512813 SLC35G1Q2M3R5 365 aa10.62□□□□□ -0.71
CLCN3-208ENST00000512813 TRIM61Q5EBN2 209 aa10.62□□□□□ -0.71
CLCN3-208ENST00000512813 FAM160B1Q5W0V3 765 aa10.62□□□□□ -0.71
CLCN3-208ENST00000512813 FUT10Q6P4F1 479 aa10.62□□□□□ -0.71
CLCN3-208ENST00000512813 USP17L6PQ6QN14 398 aa10.62□□□□□ -0.71
CLCN3-208ENST00000512813 MFSD6Q6ZSS7 791 aa10.62□□□□□ -0.71
CLCN3-208ENST00000512813 C11orf74Q86VG3 221 aa10.62□□□□□ -0.71
CLCN3-208ENST00000512813 RALGPS2Q86X27 583 aaPredicted RBP10.62□□□□□ -0.71
CLCN3-208ENST00000512813 SMARCC2Q8TAQ2 1214 aa10.62□□□□□ -0.71
CLCN3-208ENST00000512813 CSGALNACT1Q8TDX6 532 aa10.62□□□□□ -0.71
CLCN3-208ENST00000512813 ESR2Q92731 530 aa10.62□□□□□ -0.71
CLCN3-208ENST00000512813 ZNF668Q96K58 619 aaPredicted RBP10.62□□□□□ -0.71
CLCN3-208ENST00000512813 FCRL3Q96P31 734 aaPredicted RBP10.62□□□□□ -0.71
CLCN3-208ENST00000512813 PIGSQ96S52 555 aa10.62□□□□□ -0.71
CLCN3-208ENST00000512813 SDF4Q9BRK5 362 aa10.62□□□□□ -0.71
CLCN3-208ENST00000512813 PTPRBP23467 1997 aa10.62□□□□□ -0.71
CLCN3-208ENST00000512813 ZMYM6O95789 1325 aa10.61□□□□□ -0.71
CLCN3-208ENST00000512813 SLC38A8A6NNN8 435 aa10.61□□□□□ -0.71
CLCN3-208ENST00000512813 SPECC1L-ADORA2AF8WAN1 911 aa10.61□□□□□ -0.71
CLCN3-208ENST00000512813 BACH1O14867 736 aa10.61□□□□□ -0.71
CLCN3-208ENST00000512813 MAGEB2O15479 319 aa10.61□□□□□ -0.71
CLCN3-208ENST00000512813 HMMRO75330 724 aa10.61□□□□□ -0.71
CLCN3-208ENST00000512813 POMCP01189 267 aa10.61□□□□□ -0.71
CLCN3-208ENST00000512813 ENGP17813 658 aa10.61□□□□□ -0.71
CLCN3-208ENST00000512813 TMOD1P28289 359 aa10.61□□□□□ -0.71
CLCN3-208ENST00000512813 KPNA1P52294 538 aaPredicted RBP10.61□□□□□ -0.71
CLCN3-208ENST00000512813 CYP4F3Q08477 520 aa10.61□□□□□ -0.71
CLCN3-208ENST00000512813 DSC1Q08554 894 aa10.61□□□□□ -0.71
CLCN3-208ENST00000512813 UVSSAQ2YD98 709 aa10.61□□□□□ -0.71
CLCN3-208ENST00000512813 PRSS36Q5K4E3 855 aa10.61□□□□□ -0.71
CLCN3-208ENST00000512813 COLEC12Q5KU26 742 aa10.61□□□□□ -0.71
CLCN3-208ENST00000512813 PRSS55Q6UWB4 352 aaPredicted RBP10.61□□□□□ -0.71
CLCN3-208ENST00000512813 RTL10Q7L3V2 364 aa10.61□□□□□ -0.71
CLCN3-208ENST00000512813 CCDC60Q8IWA6 550 aaPredicted RBP10.61□□□□□ -0.71
CLCN3-208ENST00000512813 MIER1Q8N108 512 aa10.61□□□□□ -0.71
CLCN3-208ENST00000512813 HDDC3Q8N4P3 179 aa10.61□□□□□ -0.71
CLCN3-208ENST00000512813 FAM200AQ8TCP9 573 aa10.61□□□□□ -0.71
CLCN3-208ENST00000512813 SCLT1Q96NL6 688 aa10.61□□□□□ -0.71
CLCN3-208ENST00000512813 NUSAP1Q9BXS6 441 aaKnown RBP10.61□□□□□ -0.71
CLCN3-208ENST00000512813 GPR62Q9BZJ7 368 aa10.61□□□□□ -0.71
CLCN3-208ENST00000512813 PIN4Q9Y237 131 aaKnown RBP10.61□□□□□ -0.71
CLCN3-208ENST00000512813 MUC22E2RYF6 1773 aaPredicted RBP10.61□□□□□ -0.71
CLCN3-208ENST00000512813 ABCA7Q8IZY2 2146 aa10.61□□□□□ -0.71
CLCN3-208ENST00000512813 KIF26AQ9ULI4 1882 aaPredicted RBP10.61□□□□□ -0.71
CLCN3-208ENST00000512813 ATG2BQ96BY7 2078 aa10.61□□□□□ -0.71
CLCN3-208ENST00000512813 NCANO14594 1321 aa10.6□□□□□ -0.71
CLCN3-208ENST00000512813 NEDD4P46934 1319 aa10.6□□□□□ -0.71
CLCN3-208ENST00000512813 WDR27A2RRH5 827 aa10.6□□□□□ -0.71
CLCN3-208ENST00000512813 FAM205CA6NFA0 338 aa10.6□□□□□ -0.71
CLCN3-208ENST00000512813 ENO4A6NNW6 628 aa10.6□□□□□ -0.71
CLCN3-208ENST00000512813 B8ZZF3 427 aa10.6□□□□□ -0.71
CLCN3-208ENST00000512813 MEIS2O14770 477 aa10.6□□□□□ -0.71
CLCN3-208ENST00000512813 ATG13O75143 517 aa10.6□□□□□ -0.71
CLCN3-208ENST00000512813 CSDE1O75534 798 aaKnown RBP10.6□□□□□ -0.71
CLCN3-208ENST00000512813 FGAP02671 866 aa10.6□□□□□ -0.71
CLCN3-208ENST00000512813 SFPQP23246 707 aaKnown RBP eCLIP10.6□□□□□ -0.71
CLCN3-208ENST00000512813 GBP1P32455 592 aa10.6□□□□□ -0.71
CLCN3-208ENST00000512813 NT5C2P49902 561 aa10.6□□□□□ -0.71
CLCN3-208ENST00000512813 CSRP3P50461 194 aa10.6□□□□□ -0.71
CLCN3-208ENST00000512813 PON2Q15165 354 aa10.6□□□□□ -0.71
CLCN3-208ENST00000512813 TRIP6Q15654 476 aaKnown RBP10.6□□□□□ -0.71
CLCN3-208ENST00000512813 RTP2Q5QGT7 225 aa10.6□□□□□ -0.71
CLCN3-208ENST00000512813 AXDND1Q5T1B0 1012 aaPredicted RBP10.6□□□□□ -0.71
CLCN3-208ENST00000512813 EFCAB12Q6NXP0 572 aa10.6□□□□□ -0.71
CLCN3-208ENST00000512813 ABHD15Q6UXT9 468 aa10.6□□□□□ -0.71
CLCN3-208ENST00000512813 KRT25Q7Z3Z0 450 aa10.6□□□□□ -0.71
CLCN3-208ENST00000512813 IQCA1Q86XH1 822 aa10.6□□□□□ -0.71
CLCN3-208ENST00000512813 TBC1D10CQ8IV04 446 aa10.6□□□□□ -0.71
CLCN3-208ENST00000512813 MFSD6LQ8IWD5 586 aa10.6□□□□□ -0.71
CLCN3-208ENST00000512813 FTSJ3Q8IY81 847 aaKnown RBP10.6□□□□□ -0.71
CLCN3-208ENST00000512813 LRRC71Q8N4P6 559 aa10.6□□□□□ -0.71
CLCN3-208ENST00000512813 ENAHQ8N8S7 591 aaPredicted RBP10.6□□□□□ -0.71
CLCN3-208ENST00000512813 PNPLA1Q8N8W4 532 aa10.6□□□□□ -0.71
CLCN3-208ENST00000512813 SMARCD2Q92925 531 aa10.6□□□□□ -0.71
CLCN3-208ENST00000512813 CUL5Q93034 780 aa10.6□□□□□ -0.71
CLCN3-208ENST00000512813 DCBLD2Q96PD2 775 aa10.6□□□□□ -0.71
CLCN3-208ENST00000512813 CLSTN3Q9BQT9 956 aa10.6□□□□□ -0.71
CLCN3-208ENST00000512813 RIOX1Q9H6W3 641 aa10.6□□□□□ -0.71
CLCN3-208ENST00000512813 TRPV4Q9HBA0 871 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms