RNA–Protein interactions for RNA: ENST00000512725.5

DDR1-269, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 539 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-269ENST00000512725 SF3B1O75533 1304 aaKnown RBP eCLIP17.75■□□□□ 0.438e-6■■■■■ 107
DDR1-269ENST00000512725 PATJQ8NI35 1801 aa17.75■□□□□ 0.43
DDR1-269ENST00000512725 CASTOR2A6NHX0 329 aa17.75■□□□□ 0.43
DDR1-269ENST00000512725 NCAM2O15394 837 aa17.75■□□□□ 0.43
DDR1-269ENST00000512725 SLC37A4O43826 429 aa17.75■□□□□ 0.43
DDR1-269ENST00000512725 C1RP00736 705 aa17.75■□□□□ 0.43
DDR1-269ENST00000512725 HNRNPA1P09651 372 aaKnown RBP eCLIP17.75■□□□□ 0.43
DDR1-269ENST00000512725 MAGEA9P43362 315 aa17.75■□□□□ 0.43
DDR1-269ENST00000512725 SSRP1Q08945 709 aaKnown RBP17.75■□□□□ 0.43
DDR1-269ENST00000512725 TFDP1Q14186 410 aa17.75■□□□□ 0.43
DDR1-269ENST00000512725 NTRK3Q16288 839 aa17.75■□□□□ 0.43
DDR1-269ENST00000512725 PSMD5Q16401 504 aa17.75■□□□□ 0.43
DDR1-269ENST00000512725 LPAL2Q16609 132 aa17.75■□□□□ 0.43
DDR1-269ENST00000512725 ST3GAL2Q16842 350 aa17.75■□□□□ 0.43
DDR1-269ENST00000512725 RTP2Q5QGT7 225 aa17.75■□□□□ 0.43
DDR1-269ENST00000512725 FAM171A1Q5VUB5 890 aa17.75■□□□□ 0.43
DDR1-269ENST00000512725 NCAPH2Q6IBW4 605 aa17.75■□□□□ 0.43
DDR1-269ENST00000512725 TRIM22Q8IYM9 498 aa17.75■□□□□ 0.43
DDR1-269ENST00000512725 CCDC51Q96ER9 411 aa17.75■□□□□ 0.43
DDR1-269ENST00000512725 LXNQ9BS40 222 aa17.75■□□□□ 0.43
DDR1-269ENST00000512725 DDX23Q9BUQ8 820 aaKnown RBP17.75■□□□□ 0.43
DDR1-269ENST00000512725 RAB23Q9ULC3 237 aa17.75■□□□□ 0.43
DDR1-269ENST00000512725 GPR179Q6PRD1 2367 aa17.75■□□□□ 0.43
DDR1-269ENST00000512725 SPTBN2O15020 2390 aa17.74■□□□□ 0.43
DDR1-269ENST00000512725 TPRP12270 2363 aaKnown RBP17.74■□□□□ 0.43
DDR1-269ENST00000512725 ZBTB39O15060 712 aa17.74■□□□□ 0.43
DDR1-269ENST00000512725 IFNAR1P17181 557 aa17.74■□□□□ 0.43
DDR1-269ENST00000512725 TARSP26639 723 aaKnown RBP17.74■□□□□ 0.43
DDR1-269ENST00000512725 PTENP60484 403 aa17.74■□□□□ 0.43
DDR1-269ENST00000512725 CYP4A11Q02928 519 aa17.74■□□□□ 0.43
DDR1-269ENST00000512725 GRIK3Q13003 919 aa17.74■□□□□ 0.43
DDR1-269ENST00000512725 HSP90AA2PQ14568 343 aaPredicted RBP17.74■□□□□ 0.43
DDR1-269ENST00000512725 SLC7A14Q8TBB6 771 aa17.74■□□□□ 0.43
DDR1-269ENST00000512725 DYDC2Q96IM9 177 aa17.74■□□□□ 0.43
DDR1-269ENST00000512725 MBOAT7Q96N66 472 aa17.74■□□□□ 0.43
DDR1-269ENST00000512725 PAAF1Q9BRP4 392 aa17.74■□□□□ 0.43
DDR1-269ENST00000512725 RTKNQ9BST9 563 aa17.74■□□□□ 0.43
DDR1-269ENST00000512725 TTPALQ9BTX7 342 aa17.74■□□□□ 0.43
DDR1-269ENST00000512725 OSBPL6Q9BZF3 934 aa17.74■□□□□ 0.43
DDR1-269ENST00000512725 HCFC1R1Q9NWW0 138 aa17.74■□□□□ 0.43
DDR1-269ENST00000512725 RGL1Q9NZL6 768 aa17.74■□□□□ 0.43
DDR1-269ENST00000512725 PPME1Q9Y570 386 aa17.74■□□□□ 0.43
DDR1-269ENST00000512725 PAPLNO95428 1278 aa17.73■□□□□ 0.43
DDR1-269ENST00000512725 ARF4P18085 180 aaPredicted RBP17.73■□□□□ 0.43
DDR1-269ENST00000512725 PPP2R5CQ13362 524 aa17.73■□□□□ 0.43
DDR1-269ENST00000512725 CTTNQ14247 550 aaKnown RBP17.73■□□□□ 0.43
DDR1-269ENST00000512725 MXD4Q14582 209 aaPredicted RBP17.73■□□□□ 0.43
DDR1-269ENST00000512725 TMEM132AQ24JP5 1023 aa17.73■□□□□ 0.43
DDR1-269ENST00000512725 PABPC1LQ4VXU2 614 aaKnown RBP17.73■□□□□ 0.43
DDR1-269ENST00000512725 RSPO2Q6UXX9 243 aaPredicted RBP17.73■□□□□ 0.43
DDR1-269ENST00000512725 TPH2Q8IWU9 490 aa17.73■□□□□ 0.43
DDR1-269ENST00000512725 GPR65Q8IYL9 337 aa17.73■□□□□ 0.43
DDR1-269ENST00000512725 ZBTB44Q8NCP5 570 aa17.73■□□□□ 0.43
DDR1-269ENST00000512725 MCRS1Q96EZ8 462 aa17.73■□□□□ 0.43
DDR1-269ENST00000512725 CCDC43Q96MW1 224 aaKnown RBP17.73■□□□□ 0.43
DDR1-269ENST00000512725 CLSTN3Q9BQT9 956 aa17.73■□□□□ 0.43
DDR1-269ENST00000512725 EPC1Q9H2F5 836 aa17.73■□□□□ 0.43
DDR1-269ENST00000512725 VAV3Q9UKW4 847 aa17.73■□□□□ 0.43
DDR1-269ENST00000512725 NDRG2Q9UN36 371 aaKnown RBP17.73■□□□□ 0.43
DDR1-269ENST00000512725 NID2Q14112 1375 aa17.72■□□□□ 0.43
DDR1-269ENST00000512725 B4GALT5O43286 388 aa17.72■□□□□ 0.43
DDR1-269ENST00000512725 TBC1D4O60343 1298 aa17.72■□□□□ 0.43
DDR1-269ENST00000512725 SPEM2Q0P670 501 aa17.72■□□□□ 0.43
DDR1-269ENST00000512725 PCBP1Q15365 356 aaKnown RBP eCLIP17.72■□□□□ 0.43
DDR1-269ENST00000512725 AXDND1Q5T1B0 1012 aaPredicted RBP17.72■□□□□ 0.43
DDR1-269ENST00000512725 SLC27A1Q6PCB7 646 aa17.72■□□□□ 0.43
DDR1-269ENST00000512725 MOXD1Q6UVY6 613 aa17.72■□□□□ 0.43
DDR1-269ENST00000512725 ZNF852Q6ZMS4 543 aa17.72■□□□□ 0.43
DDR1-269ENST00000512725 PRR23BQ6ZRT6 265 aa17.72■□□□□ 0.43
DDR1-269ENST00000512725 C4orf19Q8IY42 314 aa17.72■□□□□ 0.43
DDR1-269ENST00000512725 FAM20AQ96MK3 541 aa17.72■□□□□ 0.43
DDR1-269ENST00000512725 NELL2Q99435 816 aa17.72■□□□□ 0.43
DDR1-269ENST00000512725 HEBP1Q9NRV9 189 aa17.72■□□□□ 0.43
DDR1-269ENST00000512725 MRPS17Q9Y2R5 130 aaKnown RBP17.72■□□□□ 0.43
DDR1-269ENST00000512725 MRPS23Q9Y3D9 190 aaKnown RBP17.72■□□□□ 0.43
DDR1-269ENST00000512725 EPG5Q9HCE0 2579 aa17.72■□□□□ 0.43
DDR1-269ENST00000512725 CCDC194A0A1B0GVG4 234 aa17.71■□□□□ 0.43
DDR1-269ENST00000512725 CPLX1O14810 134 aa17.71■□□□□ 0.43
DDR1-269ENST00000512725 ADAM12O43184 909 aa17.71■□□□□ 0.43
DDR1-269ENST00000512725 CCNT1O60563 726 aaKnown RBP17.71■□□□□ 0.43
DDR1-269ENST00000512725 PDIA3P30101 505 aaKnown RBP17.71■□□□□ 0.43
DDR1-269ENST00000512725 MBTD1Q05BQ5 628 aa17.71■□□□□ 0.43
DDR1-269ENST00000512725 MTAPQ13126 283 aa17.71■□□□□ 0.43
DDR1-269ENST00000512725 EPHA7Q15375 998 aa17.71■□□□□ 0.43
DDR1-269ENST00000512725 KRT25Q7Z3Z0 450 aa17.71■□□□□ 0.43
DDR1-269ENST00000512725 NPAS3Q8IXF0 933 aa17.71■□□□□ 0.43
DDR1-269ENST00000512725 GSTCDQ8NEC7 633 aa17.71■□□□□ 0.43
DDR1-269ENST00000512725 LNX1Q8TBB1 728 aaPredicted RBP17.71■□□□□ 0.43
DDR1-269ENST00000512725 PARD6AQ9NPB6 346 aa17.71■□□□□ 0.43
DDR1-269ENST00000512725 DNMT3BQ9UBC3 853 aaKnown RBP17.71■□□□□ 0.43
DDR1-269ENST00000512725 DYNC1LI1Q9Y6G9 523 aaKnown RBP17.71■□□□□ 0.43
DDR1-269ENST00000512725 LILRB5O75023 590 aa17.7■□□□□ 0.42
DDR1-269ENST00000512725 KIF4AO95239 1232 aa17.7■□□□□ 0.42
DDR1-269ENST00000512725 RPS6KB1P23443 525 aa17.7■□□□□ 0.42
DDR1-269ENST00000512725 OR1D2P34982 312 aa17.7■□□□□ 0.42
DDR1-269ENST00000512725 TUSC3Q13454 348 aa17.7■□□□□ 0.42
DDR1-269ENST00000512725 CAPSQ13938 189 aa17.7■□□□□ 0.42
DDR1-269ENST00000512725 PPM1JQ5JR12 505 aa17.7■□□□□ 0.42
DDR1-269ENST00000512725 ASAP3Q8TDY4 903 aa17.7■□□□□ 0.42
DDR1-269ENST00000512725 PIK3R5Q8WYR1 880 aa17.7■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms