RNA–Protein interactions for RNA: ENST00000512669.1

LETM1-207, Transcript of leucine zipper and EF-hand containing transmembrane protein 1, humanhuman

TSL 1 (best)

Gene LETM1, Length 966 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETM1-207ENST00000512669 COLEC11Q9BWP8 271 aa16.09■□□□□ 0.17
LETM1-207ENST00000512669 EIF2AQ9BY44 585 aaKnown RBP16.09■□□□□ 0.17
LETM1-207ENST00000512669 POLR3FQ9H1D9 316 aaPredicted RBP16.09■□□□□ 0.17
LETM1-207ENST00000512669 UPF2Q9HAU5 1272 aaKnown RBP16.09■□□□□ 0.17
LETM1-207ENST00000512669 EIF4ENIF1Q9NRA8 985 aaKnown RBP16.09■□□□□ 0.17
LETM1-207ENST00000512669 MARCH5Q9NX47 278 aa16.09■□□□□ 0.17
LETM1-207ENST00000512669 NOL7Q9UMY1 257 aaKnown RBP16.09■□□□□ 0.17
LETM1-207ENST00000512669 PRG3Q9Y2Y8 225 aaPredicted RBP16.09■□□□□ 0.17
LETM1-207ENST00000512669 IPPQ9Y573 584 aa16.09■□□□□ 0.17
LETM1-207ENST00000512669 ZFP37Q9Y6Q3 630 aaPredicted RBP16.09■□□□□ 0.17
LETM1-207ENST00000512669 ARID2Q68CP9 1835 aa16.09■□□□□ 0.17
LETM1-207ENST00000512669 EP300Q09472 2414 aaPredicted RBP16.09■□□□□ 0.17
LETM1-207ENST00000512669 ZMYM2Q9UBW7 1377 aa16.09■□□□□ 0.17
LETM1-207ENST00000512669 CACNA1AO00555 2505 aa16.09■□□□□ 0.17
LETM1-207ENST00000512669 MTCL1Q9Y4B5 1905 aaKnown RBP16.08■□□□□ 0.16
LETM1-207ENST00000512669 DOCK8Q8NF50 2099 aa16.08■□□□□ 0.16
LETM1-207ENST00000512669 PP2D1A8MPX8 630 aa16.08■□□□□ 0.16
LETM1-207ENST00000512669 EFEMP2O95967 443 aa16.08■□□□□ 0.16
LETM1-207ENST00000512669 LMNAP02545 664 aaKnown RBP16.08■□□□□ 0.16
LETM1-207ENST00000512669 TFDP1Q14186 410 aa16.08■□□□□ 0.16
LETM1-207ENST00000512669 KIAA0319Q5VV43 1072 aa16.08■□□□□ 0.16
LETM1-207ENST00000512669 PHLDB3Q6NSJ2 640 aa16.08■□□□□ 0.16
LETM1-207ENST00000512669 IGSF22Q8N9C0 903 aa16.08■□□□□ 0.16
LETM1-207ENST00000512669 CPB2Q96IY4 423 aa16.08■□□□□ 0.16
LETM1-207ENST00000512669 NACC1Q96RE7 527 aa16.08■□□□□ 0.16
LETM1-207ENST00000512669 RNF39Q9H2S5 420 aa16.08■□□□□ 0.16
LETM1-207ENST00000512669 PIDD1Q9HB75 910 aa16.08■□□□□ 0.16
LETM1-207ENST00000512669 POLD4Q9HCU8 107 aa16.08■□□□□ 0.16
LETM1-207ENST00000512669 FNIP2Q9P278 1114 aa16.08■□□□□ 0.16
LETM1-207ENST00000512669 GIT1Q9Y2X7 761 aa16.08■□□□□ 0.16
LETM1-207ENST00000512669 VPS13AQ96RL7 3174 aa16.08■□□□□ 0.16
LETM1-207ENST00000512669 TDRD15B5MCY1 1934 aaKnown RBP16.07■□□□□ 0.16
LETM1-207ENST00000512669 ARL5CA6NH57 179 aa16.07■□□□□ 0.16
LETM1-207ENST00000512669 TTLL13PA6NNM8 815 aa16.07■□□□□ 0.16
LETM1-207ENST00000512669 B4GALT5O43286 388 aa16.07■□□□□ 0.16
LETM1-207ENST00000512669 N4BP1O75113 896 aaKnown RBP16.07■□□□□ 0.16
LETM1-207ENST00000512669 CFHP08603 1231 aa16.07■□□□□ 0.16
LETM1-207ENST00000512669 MCM2P49736 904 aa16.07■□□□□ 0.16
LETM1-207ENST00000512669 PDIA5Q14554 519 aa16.07■□□□□ 0.16
LETM1-207ENST00000512669 PADI6Q6TGC4 694 aa16.07■□□□□ 0.16
LETM1-207ENST00000512669 SLC44A3Q8N4M1 653 aa16.07■□□□□ 0.16
LETM1-207ENST00000512669 KCNG4Q8TDN1 519 aa16.07■□□□□ 0.16
LETM1-207ENST00000512669 MMTAG2Q9BU76 263 aaKnown RBP16.07■□□□□ 0.16
LETM1-207ENST00000512669 NFKBIZQ9BYH8 718 aa16.07■□□□□ 0.16
LETM1-207ENST00000512669 TRIM6Q9C030 488 aaPredicted RBP16.07■□□□□ 0.16
LETM1-207ENST00000512669 CHST7Q9NS84 486 aa16.07■□□□□ 0.16
LETM1-207ENST00000512669 LRWD1Q9UFC0 647 aa16.07■□□□□ 0.16
LETM1-207ENST00000512669 KRBA1A5PL33 1030 aa16.06■□□□□ 0.16
LETM1-207ENST00000512669 INO80B-WBP1J3KQ70 363 aa16.06■□□□□ 0.16
LETM1-207ENST00000512669 NARSO43776 548 aaKnown RBP16.06■□□□□ 0.16
LETM1-207ENST00000512669 ARF4P18085 180 aaPredicted RBP16.06■□□□□ 0.16
LETM1-207ENST00000512669 CYP11B2P19099 503 aa16.06■□□□□ 0.16
LETM1-207ENST00000512669 CDC25AP30304 524 aa16.06■□□□□ 0.16
LETM1-207ENST00000512669 MLH1P40692 756 aa16.06■□□□□ 0.16
LETM1-207ENST00000512669 USP41Q3LFD5 358 aa16.06■□□□□ 0.16
LETM1-207ENST00000512669 MCTP1Q6DN14 999 aa16.06■□□□□ 0.16
LETM1-207ENST00000512669 CDR2LQ86X02 465 aaPredicted RBP16.06■□□□□ 0.16
LETM1-207ENST00000512669 ERMNQ8TAM6 284 aa16.06■□□□□ 0.16
LETM1-207ENST00000512669 FEZF2Q8TBJ5 459 aa16.06■□□□□ 0.16
LETM1-207ENST00000512669 BORCS6Q96GS4 357 aa16.06■□□□□ 0.16
LETM1-207ENST00000512669 GAD1Q99259 594 aa16.06■□□□□ 0.16
LETM1-207ENST00000512669 BACH2Q9BYV9 841 aa16.06■□□□□ 0.16
LETM1-207ENST00000512669 CSRNP2Q9H175 543 aa16.06■□□□□ 0.16
LETM1-207ENST00000512669 TBC1D17Q9HA65 648 aa16.06■□□□□ 0.16
LETM1-207ENST00000512669 SLC2A4RGQ9NR83 387 aa16.06■□□□□ 0.16
LETM1-207ENST00000512669 HES2Q9Y543 173 aa16.06■□□□□ 0.16
LETM1-207ENST00000512669 LAMP2P13473 410 aa16.05■□□□□ 0.16
LETM1-207ENST00000512669 MUTP22033 750 aa16.05■□□□□ 0.16
LETM1-207ENST00000512669 CCT6AP40227 531 aaKnown RBP16.05■□□□□ 0.16
LETM1-207ENST00000512669 CUL4AQ13619 759 aa16.05■□□□□ 0.16
LETM1-207ENST00000512669 CDCA2Q69YH5 1023 aaPredicted RBP16.05■□□□□ 0.16
LETM1-207ENST00000512669 FUT10Q6P4F1 479 aa16.05■□□□□ 0.16
LETM1-207ENST00000512669 KCNK18Q7Z418 384 aa16.05■□□□□ 0.16
LETM1-207ENST00000512669 ZNF707Q96C28 371 aaPredicted RBP16.05■□□□□ 0.16
LETM1-207ENST00000512669 SHDQ96IW2 340 aa16.05■□□□□ 0.16
LETM1-207ENST00000512669 MYADMQ96S97 322 aa16.05■□□□□ 0.16
LETM1-207ENST00000512669 PRKD2Q9BZL6 878 aa16.05■□□□□ 0.16
LETM1-207ENST00000512669 NT5C3AQ9H0P0 336 aa16.05■□□□□ 0.16
LETM1-207ENST00000512669 ARHGEF3Q9NR81 526 aa16.05■□□□□ 0.16
LETM1-207ENST00000512669 MIOSQ9NXC5 875 aa16.05■□□□□ 0.16
LETM1-207ENST00000512669 CA14Q9ULX7 337 aa16.05■□□□□ 0.16
LETM1-207ENST00000512669 KIAA1024Q9UPX6 916 aa16.05■□□□□ 0.16
LETM1-207ENST00000512669 USP20Q9Y2K6 914 aa16.05■□□□□ 0.16
LETM1-207ENST00000512669 ARHGEF35A5YM69 484 aa16.04■□□□□ 0.16
LETM1-207ENST00000512669 ANHXE9PGG2 379 aa16.04■□□□□ 0.16
LETM1-207ENST00000512669 TGM5O43548 720 aa16.04■□□□□ 0.16
LETM1-207ENST00000512669 RFPL2O75678 378 aa16.04■□□□□ 0.16
LETM1-207ENST00000512669 EDN1P05305 212 aa16.04■□□□□ 0.16
LETM1-207ENST00000512669 PRPHP41219 470 aa16.04■□□□□ 0.16
LETM1-207ENST00000512669 SCNN1GP51170 649 aa16.04■□□□□ 0.16
LETM1-207ENST00000512669 ATP2C1P98194 919 aaPredicted RBP16.04■□□□□ 0.16
LETM1-207ENST00000512669 GRIK3Q13003 919 aa16.04■□□□□ 0.16
LETM1-207ENST00000512669 TAS1R1Q7RTX1 841 aa16.04■□□□□ 0.16
LETM1-207ENST00000512669 MCPH1Q8NEM0 835 aa16.04■□□□□ 0.16
LETM1-207ENST00000512669 RSAD2Q8WXG1 361 aa16.04■□□□□ 0.16
LETM1-207ENST00000512669 CCDC43Q96MW1 224 aaKnown RBP16.04■□□□□ 0.16
LETM1-207ENST00000512669 BHMT2Q9H2M3 363 aa16.04■□□□□ 0.16
LETM1-207ENST00000512669 FZD8Q9H461 694 aa16.04■□□□□ 0.16
LETM1-207ENST00000512669 DDX19AQ9NUU7 478 aaKnown RBP16.04■□□□□ 0.16
LETM1-207ENST00000512669 DAXXQ9UER7 740 aaPredicted RBP16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms