RNA–Protein interactions for RNA: ENST00000512274.1

PDLIM5-217, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 372 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-217ENST00000512274 JADE2Q9NQC1 790 aa11.57□□□□□ -0.56
PDLIM5-217ENST00000512274 RGS18Q9NS28 235 aa11.57□□□□□ -0.56
PDLIM5-217ENST00000512274 DZANK1Q9NVP4 752 aa11.57□□□□□ -0.56
PDLIM5-217ENST00000512274 ERAP1Q9NZ08 941 aa11.57□□□□□ -0.56
PDLIM5-217ENST00000512274 PKD2L1Q9P0L9 805 aa11.57□□□□□ -0.56
PDLIM5-217ENST00000512274 IGSF9Q9P2J2 1179 aa11.57□□□□□ -0.56
PDLIM5-217ENST00000512274 RRN3P2A6NIE6 340 aa11.56□□□□□ -0.56
PDLIM5-217ENST00000512274 PP2D1A8MPX8 630 aa11.56□□□□□ -0.56
PDLIM5-217ENST00000512274 ITGB5P18084 799 aa11.56□□□□□ -0.56
PDLIM5-217ENST00000512274 GBP2P32456 591 aaPredicted RBP11.56□□□□□ -0.56
PDLIM5-217ENST00000512274 PPM1AP35813 382 aa11.56□□□□□ -0.56
PDLIM5-217ENST00000512274 ZNF76P36508 570 aa11.56□□□□□ -0.56
PDLIM5-217ENST00000512274 CSTF1Q05048 431 aaKnown RBP11.56□□□□□ -0.56
PDLIM5-217ENST00000512274 EHHADHQ08426 723 aa11.56□□□□□ -0.56
PDLIM5-217ENST00000512274 ARHGAP30Q7Z6I6 1101 aaPredicted RBP11.56□□□□□ -0.56
PDLIM5-217ENST00000512274 GPR149Q86SP6 731 aa11.56□□□□□ -0.56
PDLIM5-217ENST00000512274 PLA2G4DQ86XP0 818 aa11.56□□□□□ -0.56
PDLIM5-217ENST00000512274 SLC44A3Q8N4M1 653 aa11.56□□□□□ -0.56
PDLIM5-217ENST00000512274 RNF214Q8ND24 703 aa11.56□□□□□ -0.56
PDLIM5-217ENST00000512274 SEPT1Q8WYJ6 367 aa11.56□□□□□ -0.56
PDLIM5-217ENST00000512274 LARP4BQ92615 738 aaKnown RBP11.56□□□□□ -0.56
PDLIM5-217ENST00000512274 RAD54LQ92698 747 aa11.56□□□□□ -0.56
PDLIM5-217ENST00000512274 EVPLQ92817 2033 aa11.56□□□□□ -0.56
PDLIM5-217ENST00000512274 HSD17B14Q9BPX1 270 aa11.56□□□□□ -0.56
PDLIM5-217ENST00000512274 C1orf112Q9NSG2 853 aa11.56□□□□□ -0.56
PDLIM5-217ENST00000512274 TBC1D22BQ9NU19 505 aa11.56□□□□□ -0.56
PDLIM5-217ENST00000512274 TMEM161AQ9NX61 479 aa11.56□□□□□ -0.56
PDLIM5-217ENST00000512274 ST3GAL5Q9UNP4 418 aa11.56□□□□□ -0.56
PDLIM5-217ENST00000512274 DYNC1LI1Q9Y6G9 523 aaKnown RBP11.56□□□□□ -0.56
PDLIM5-217ENST00000512274 COL4A3Q01955 1670 aa11.55□□□□□ -0.56
PDLIM5-217ENST00000512274 SPTBN2O15020 2390 aa11.55□□□□□ -0.56
PDLIM5-217ENST00000512274 KLRC4O43908 158 aa11.55□□□□□ -0.56
PDLIM5-217ENST00000512274 MARCH6O60337 910 aa11.55□□□□□ -0.56
PDLIM5-217ENST00000512274 ATP9AO75110 1047 aa11.55□□□□□ -0.56
PDLIM5-217ENST00000512274 N4BP1O75113 896 aaKnown RBP11.55□□□□□ -0.56
PDLIM5-217ENST00000512274 LYPLA2O95372 231 aa11.55□□□□□ -0.56
PDLIM5-217ENST00000512274 PRR29P0C7W0 189 aa11.55□□□□□ -0.56
PDLIM5-217ENST00000512274 CDC25AP30304 524 aa11.55□□□□□ -0.56
PDLIM5-217ENST00000512274 CDC25BP30305 580 aa11.55□□□□□ -0.56
PDLIM5-217ENST00000512274 MYL5Q02045 173 aa11.55□□□□□ -0.56
PDLIM5-217ENST00000512274 BMS1Q14692 1282 aaKnown RBP11.55□□□□□ -0.56
PDLIM5-217ENST00000512274 NCAPHQ15003 741 aa11.55□□□□□ -0.56
PDLIM5-217ENST00000512274 ZNF658Q5TYW1 1059 aaPredicted RBP11.55□□□□□ -0.56
PDLIM5-217ENST00000512274 SV2BQ7L1I2 683 aa11.55□□□□□ -0.56
PDLIM5-217ENST00000512274 ABI1Q8IZP0 508 aa11.55□□□□□ -0.56
PDLIM5-217ENST00000512274 VPS52Q8N1B4 723 aa11.55□□□□□ -0.56
PDLIM5-217ENST00000512274 RNF169Q8NCN4 708 aa11.55□□□□□ -0.56
PDLIM5-217ENST00000512274 LRRC15Q8TF66 581 aa11.55□□□□□ -0.56
PDLIM5-217ENST00000512274 SLC22A17Q8WUG5 538 aa11.55□□□□□ -0.56
PDLIM5-217ENST00000512274 TMEM40Q8WWA1 233 aa11.55□□□□□ -0.56
PDLIM5-217ENST00000512274 ATRIPQ8WXE1 791 aa11.55□□□□□ -0.56
PDLIM5-217ENST00000512274 CCDC47Q96A33 483 aaKnown RBP11.55□□□□□ -0.56
PDLIM5-217ENST00000512274 CDK5RAP3Q96JB5 506 aa11.55□□□□□ -0.56
PDLIM5-217ENST00000512274 SENP7Q9BQF6 1050 aa11.55□□□□□ -0.56
PDLIM5-217ENST00000512274 PANK2Q9BZ23 570 aa11.55□□□□□ -0.56
PDLIM5-217ENST00000512274 TMEM117Q9H0C3 514 aa11.55□□□□□ -0.56
PDLIM5-217ENST00000512274 SMARCAD1Q9H4L7 1026 aa11.55□□□□□ -0.56
PDLIM5-217ENST00000512274 PARD6AQ9NPB6 346 aa11.55□□□□□ -0.56
PDLIM5-217ENST00000512274 RNF19AQ9NV58 838 aa11.55□□□□□ -0.56
PDLIM5-217ENST00000512274 SPATA6Q9NWH7 488 aaPredicted RBP11.55□□□□□ -0.56
PDLIM5-217ENST00000512274 KCND2Q9NZV8 630 aa11.55□□□□□ -0.56
PDLIM5-217ENST00000512274 SMG5Q9UPR3 1016 aaKnown RBP11.55□□□□□ -0.56
PDLIM5-217ENST00000512274 PCDHA2Q9Y5H9 948 aa11.55□□□□□ -0.56
PDLIM5-217ENST00000512274 PATJQ8NI35 1801 aa11.55□□□□□ -0.56
PDLIM5-217ENST00000512274 NFASCO94856 1347 aa11.55□□□□□ -0.56
PDLIM5-217ENST00000512274 FRMD3A2A2Y4 597 aa11.54□□□□□ -0.56
PDLIM5-217ENST00000512274 BECN2A8MW95 431 aa11.54□□□□□ -0.56
PDLIM5-217ENST00000512274 GOLGA6L19H0YKK7 550 aa11.54□□□□□ -0.56
PDLIM5-217ENST00000512274 IPO5O00410 1097 aaKnown RBP11.54□□□□□ -0.56
PDLIM5-217ENST00000512274 SPTLC1O15269 473 aa11.54□□□□□ -0.56
PDLIM5-217ENST00000512274 DHX15O43143 795 aaKnown RBP11.54□□□□□ -0.56
PDLIM5-217ENST00000512274 LAMTOR5O43504 91 aa11.54□□□□□ -0.56
PDLIM5-217ENST00000512274 RPN1P04843 607 aaKnown RBP11.54□□□□□ -0.56
PDLIM5-217ENST00000512274 SPATA31C1P0DKV0 1188 aa11.54□□□□□ -0.56
PDLIM5-217ENST00000512274 MYBP10242 640 aa11.54□□□□□ -0.56
PDLIM5-217ENST00000512274 TGM1P22735 817 aa11.54□□□□□ -0.56
PDLIM5-217ENST00000512274 SPEM2Q0P670 501 aa11.54□□□□□ -0.56
PDLIM5-217ENST00000512274 PSMD2Q13200 908 aa11.54□□□□□ -0.56
PDLIM5-217ENST00000512274 CUL4BQ13620 913 aa11.54□□□□□ -0.56
PDLIM5-217ENST00000512274 PLCB4Q15147 1175 aa11.54□□□□□ -0.56
PDLIM5-217ENST00000512274 EPHA7Q15375 998 aa11.54□□□□□ -0.56
PDLIM5-217ENST00000512274 PTPN14Q15678 1187 aa11.54□□□□□ -0.56
PDLIM5-217ENST00000512274 LRCH2Q5VUJ6 765 aa11.54□□□□□ -0.56
PDLIM5-217ENST00000512274 PHLDB3Q6NSJ2 640 aa11.54□□□□□ -0.56
PDLIM5-217ENST00000512274 UNC13DQ70J99 1090 aa11.54□□□□□ -0.56
PDLIM5-217ENST00000512274 LUZP1Q86V48 1076 aa11.54□□□□□ -0.56
PDLIM5-217ENST00000512274 SLC39A11Q8N1S5 342 aa11.54□□□□□ -0.56
PDLIM5-217ENST00000512274 LRRC43Q8N309 656 aa11.54□□□□□ -0.56
PDLIM5-217ENST00000512274 GIMAP8Q8ND71 665 aaPredicted RBP11.54□□□□□ -0.56
PDLIM5-217ENST00000512274 RASSF8Q8NHQ8 419 aa11.54□□□□□ -0.56
PDLIM5-217ENST00000512274 MRFAP1L1Q96HT8 127 aa11.54□□□□□ -0.56
PDLIM5-217ENST00000512274 SFXN1Q9H9B4 322 aa11.54□□□□□ -0.56
PDLIM5-217ENST00000512274 AGO4Q9HCK5 861 aaKnown RBP11.54□□□□□ -0.56
PDLIM5-217ENST00000512274 ARHGEF3Q9NR81 526 aa11.54□□□□□ -0.56
PDLIM5-217ENST00000512274 KCNH7Q9NS40 1196 aa11.54□□□□□ -0.56
PDLIM5-217ENST00000512274 ANGPTL2Q9UKU9 493 aa11.54□□□□□ -0.56
PDLIM5-217ENST00000512274 LOC105378220A0A1B0GUY1 285 aaPredicted RBP11.53□□□□□ -0.56
PDLIM5-217ENST00000512274 GAS7O60861 476 aa11.53□□□□□ -0.56
PDLIM5-217ENST00000512274 RPLP2P05387 115 aaKnown RBP11.53□□□□□ -0.56
PDLIM5-217ENST00000512274 SRFP11831 508 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms