RNA–Protein interactions for RNA: ENST00000512229.6

PCDHA4-202, Transcript of protocadherin alpha 4, humanhuman

TSL 1 (best) BASIC

Gene PCDHA4, Length 4,163 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4-202ENST00000512229 ZBED1O96006 694 aa13.97□□□□□ -0.17
PCDHA4-202ENST00000512229 INHBAP08476 426 aa13.97□□□□□ -0.17
PCDHA4-202ENST00000512229 KRT7P08729 469 aa13.97□□□□□ -0.17
PCDHA4-202ENST00000512229 SNHG28P0DPA3 235 aa13.97□□□□□ -0.17
PCDHA4-202ENST00000512229 TGFB3P10600 412 aa13.97□□□□□ -0.17
PCDHA4-202ENST00000512229 VSNL1P62760 191 aa13.97□□□□□ -0.17
PCDHA4-202ENST00000512229 RBP5P82980 135 aa13.97□□□□□ -0.17
PCDHA4-202ENST00000512229 IL17AQ16552 155 aa13.97□□□□□ -0.17
PCDHA4-202ENST00000512229 AMIGO3Q86WK7 504 aa13.97□□□□□ -0.17
PCDHA4-202ENST00000512229 CACNA2D3Q8IZS8 1091 aa13.97□□□□□ -0.17
PCDHA4-202ENST00000512229 RBBP8NLQ8NC74 664 aaPredicted RBP13.97□□□□□ -0.17
PCDHA4-202ENST00000512229 PI4K2AQ9BTU6 479 aa13.97□□□□□ -0.17
PCDHA4-202ENST00000512229 SLITRK6Q9H5Y7 841 aa13.97□□□□□ -0.17
PCDHA4-202ENST00000512229 GPRC5DQ9NZD1 345 aa13.97□□□□□ -0.17
PCDHA4-202ENST00000512229 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.97□□□□□ -0.17
PCDHA4-202ENST00000512229 HOXD10P28358 340 aa13.96□□□□□ -0.17
PCDHA4-202ENST00000512229 SSTR3P32745 418 aaPredicted RBP13.96□□□□□ -0.17
PCDHA4-202ENST00000512229 GCLCP48506 637 aaPredicted RBP13.96□□□□□ -0.17
PCDHA4-202ENST00000512229 IFNAR2P48551 515 aa13.96□□□□□ -0.17
PCDHA4-202ENST00000512229 MYBPC2Q14324 1141 aa13.96□□□□□ -0.17
PCDHA4-202ENST00000512229 TTC19Q6DKK2 380 aaPredicted RBP13.96□□□□□ -0.17
PCDHA4-202ENST00000512229 ZNF507Q8TCN5 953 aa13.96□□□□□ -0.17
PCDHA4-202ENST00000512229 AMACRQ9UHK6 382 aa13.96□□□□□ -0.17
PCDHA4-202ENST00000512229 PHLPP1O60346 1717 aa13.96□□□□□ -0.17
PCDHA4-202ENST00000512229 FOXN3O00409 490 aaPredicted RBP13.96□□□□□ -0.17
PCDHA4-202ENST00000512229 MUM1L1Q5H9M0 696 aa13.96□□□□□ -0.17
PCDHA4-202ENST00000512229 GSPT2Q8IYD1 628 aaKnown RBP13.96□□□□□ -0.17
PCDHA4-202ENST00000512229 CDKL2Q92772 493 aa13.96□□□□□ -0.17
PCDHA4-202ENST00000512229 LRRC1Q9BTT6 524 aa13.96□□□□□ -0.17
PCDHA4-202ENST00000512229 DNAJC17Q9NVM6 304 aaKnown RBP13.96□□□□□ -0.17
PCDHA4-202ENST00000512229 CYP3A7-CYP3A51PA0A087WV96 503 aa13.96□□□□□ -0.18
PCDHA4-202ENST00000512229 SART1O43290 800 aaKnown RBP13.96□□□□□ -0.18
PCDHA4-202ENST00000512229 TMEM253P0C7T8 217 aa13.96□□□□□ -0.18
PCDHA4-202ENST00000512229 CYP3A7P24462 503 aa13.96□□□□□ -0.18
PCDHA4-202ENST00000512229 NAMPTP43490 491 aa13.96□□□□□ -0.18
PCDHA4-202ENST00000512229 BBS9Q3SYG4 887 aa13.96□□□□□ -0.18
PCDHA4-202ENST00000512229 FAM102AQ5T9C2 384 aaPredicted RBP13.96□□□□□ -0.18
PCDHA4-202ENST00000512229 PRPF31Q8WWY3 499 aaKnown RBP13.96□□□□□ -0.18
PCDHA4-202ENST00000512229 EXOC4Q96A65 974 aa13.96□□□□□ -0.18
PCDHA4-202ENST00000512229 MS4A14Q96JA4 679 aa13.96□□□□□ -0.18
PCDHA4-202ENST00000512229 CFAP57Q96MR6 1250 aa13.96□□□□□ -0.18
PCDHA4-202ENST00000512229 P2RX7Q99572 595 aaKnown RBP13.96□□□□□ -0.18
PCDHA4-202ENST00000512229 LACRTQ9GZZ8 138 aa13.96□□□□□ -0.18
PCDHA4-202ENST00000512229 A1CFQ9NQ94 594 aaKnown RBP13.96□□□□□ -0.18
PCDHA4-202ENST00000512229 FZD1Q9UP38 647 aa13.96□□□□□ -0.18
PCDHA4-202ENST00000512229 ARPP19P56211 112 aa13.95□□□□□ -0.18
PCDHA4-202ENST00000512229 MRPS9P82933 396 aaKnown RBP13.95□□□□□ -0.18
PCDHA4-202ENST00000512229 CDK17Q00537 523 aa13.95□□□□□ -0.18
PCDHA4-202ENST00000512229 ITKQ08881 620 aa13.95□□□□□ -0.18
PCDHA4-202ENST00000512229 ANKRD20A3Q5VUR7 823 aa13.95□□□□□ -0.18
PCDHA4-202ENST00000512229 CDR2LQ86X02 465 aaPredicted RBP13.95□□□□□ -0.18
PCDHA4-202ENST00000512229 RNF139Q8WU17 664 aa13.95□□□□□ -0.18
PCDHA4-202ENST00000512229 CPA5Q8WXQ8 436 aa13.95□□□□□ -0.18
PCDHA4-202ENST00000512229 OPTNQ96CV9 577 aa13.95□□□□□ -0.18
PCDHA4-202ENST00000512229 C18orf8Q96DM3 657 aa13.95□□□□□ -0.18
PCDHA4-202ENST00000512229 NOVA2Q9UNW9 492 aaKnown RBP13.95□□□□□ -0.18
PCDHA4-202ENST00000512229 SNX9Q9Y5X1 595 aa13.95□□□□□ -0.18
PCDHA4-202ENST00000512229 ZNF142P52746 1687 aaPredicted RBP13.95□□□□□ -0.18
PCDHA4-202ENST00000512229 TARSL2A2RTX5 802 aaKnown RBP13.95□□□□□ -0.18
PCDHA4-202ENST00000512229 GARTP22102 1010 aa13.95□□□□□ -0.18
PCDHA4-202ENST00000512229 DGKDQ16760 1214 aa13.95□□□□□ -0.18
PCDHA4-202ENST00000512229 POTEAQ6S8J7 498 aa13.95□□□□□ -0.18
PCDHA4-202ENST00000512229 METTL7BQ6UX53 244 aa13.95□□□□□ -0.18
PCDHA4-202ENST00000512229 GIMAP7Q8NHV1 300 aa13.95□□□□□ -0.18
PCDHA4-202ENST00000512229 ZNF560Q96MR9 790 aa13.95□□□□□ -0.18
PCDHA4-202ENST00000512229 TAF1DQ9H5J8 278 aaPredicted RBP13.95□□□□□ -0.18
PCDHA4-202ENST00000512229 ADM5C9JUS6 153 aa13.95□□□□□ -0.18
PCDHA4-202ENST00000512229 ZBTB39O15060 712 aa13.95□□□□□ -0.18
PCDHA4-202ENST00000512229 ACSL3O95573 720 aa13.95□□□□□ -0.18
PCDHA4-202ENST00000512229 CYP2C9P11712 490 aa13.95□□□□□ -0.18
PCDHA4-202ENST00000512229 NLRP11P59045 1033 aaKnown RBP13.95□□□□□ -0.18
PCDHA4-202ENST00000512229 TMEM62Q0P6H9 643 aa13.95□□□□□ -0.18
PCDHA4-202ENST00000512229 TMEM132DQ14C87 1099 aa13.95□□□□□ -0.18
PCDHA4-202ENST00000512229 GEN1Q17RS7 908 aa13.95□□□□□ -0.18
PCDHA4-202ENST00000512229 CCDC137Q6PK04 289 aaKnown RBP13.95□□□□□ -0.18
PCDHA4-202ENST00000512229 ARHGEF18Q6ZSZ5 1173 aa13.95□□□□□ -0.18
PCDHA4-202ENST00000512229 BZW1Q7L1Q6 419 aaKnown RBP13.95□□□□□ -0.18
PCDHA4-202ENST00000512229 L2HGDHQ9H9P8 463 aa13.95□□□□□ -0.18
PCDHA4-202ENST00000512229 ZFYVE28Q9HCC9 887 aa13.95□□□□□ -0.18
PCDHA4-202ENST00000512229 ROBO1Q9Y6N7 1651 aa13.95□□□□□ -0.18
PCDHA4-202ENST00000512229 YDJCA8MPS7 323 aa13.94□□□□□ -0.18
PCDHA4-202ENST00000512229 LPXNO60711 386 aa13.94□□□□□ -0.18
PCDHA4-202ENST00000512229 ARL13BQ3SXY8 428 aa13.94□□□□□ -0.18
PCDHA4-202ENST00000512229 GBA2Q9HCG7 927 aaPredicted RBP13.94□□□□□ -0.18
PCDHA4-202ENST00000512229 ARHGAP20Q9P2F6 1191 aa13.94□□□□□ -0.18
PCDHA4-202ENST00000512229 DUSP10Q9Y6W6 482 aa13.94□□□□□ -0.18
PCDHA4-202ENST00000512229 ATP8B3O60423 1300 aa13.94□□□□□ -0.18
PCDHA4-202ENST00000512229 FAM187AA6NFU0 413 aa13.94□□□□□ -0.18
PCDHA4-202ENST00000512229 OGTO15294 1046 aa13.94□□□□□ -0.18
PCDHA4-202ENST00000512229 KLRC4O43908 158 aa13.94□□□□□ -0.18
PCDHA4-202ENST00000512229 KRT3P12035 628 aa13.94□□□□□ -0.18
PCDHA4-202ENST00000512229 SLC1A1P43005 524 aa13.94□□□□□ -0.18
PCDHA4-202ENST00000512229 SLC12A3P55017 1021 aa13.94□□□□□ -0.18
PCDHA4-202ENST00000512229 TAP1Q03518 808 aa13.94□□□□□ -0.18
PCDHA4-202ENST00000512229 SHROOM1Q2M3G4 852 aaPredicted RBP13.94□□□□□ -0.18
PCDHA4-202ENST00000512229 CENPUQ71F23 418 aa13.94□□□□□ -0.18
PCDHA4-202ENST00000512229 FBXO16Q8IX29 292 aaPredicted RBP13.94□□□□□ -0.18
PCDHA4-202ENST00000512229 KATNAL1Q9BW62 490 aa13.94□□□□□ -0.18
PCDHA4-202ENST00000512229 KLHL14Q9P2G3 628 aa13.94□□□□□ -0.18
PCDHA4-202ENST00000512229 LRRC37A3O60309 1634 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms