RNA–Protein interactions for RNA: ENST00000511892.5

RNF4-217, Transcript of ring finger protein 4, humanhuman

TSL 4

Gene RNF4, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-217ENST00000511892 USP20Q9Y2K6 914 aa6.45□□□□□ -1.38
RNF4-217ENST00000511892 USP15Q9Y4E8 981 aaPredicted RBP6.45□□□□□ -1.38
RNF4-217ENST00000511892 NOTCH4Q99466 2003 aa6.45□□□□□ -1.38
RNF4-217ENST00000511892 KMT2EQ8IZD2 1858 aa6.45□□□□□ -1.38
RNF4-217ENST00000511892 VPS13AQ96RL7 3174 aa6.44□□□□□ -1.38
RNF4-217ENST00000511892 FSD2A1L4K1 749 aa6.44□□□□□ -1.38
RNF4-217ENST00000511892 ARHGEF35A5YM69 484 aa6.44□□□□□ -1.38
RNF4-217ENST00000511892 LRRIQ4A6NIV6 560 aa6.44□□□□□ -1.38
RNF4-217ENST00000511892 LOC730098B7Z3J9 87 aa6.44□□□□□ -1.38
RNF4-217ENST00000511892 F8W810 466 aa6.44□□□□□ -1.38
RNF4-217ENST00000511892 NRP1O14786 923 aa6.44□□□□□ -1.38
RNF4-217ENST00000511892 LILRB3O75022 631 aa6.44□□□□□ -1.38
RNF4-217ENST00000511892 NPTXRO95502 500 aa6.44□□□□□ -1.38
RNF4-217ENST00000511892 MUTP22033 750 aa6.44□□□□□ -1.38
RNF4-217ENST00000511892 AKAP5P24588 427 aa6.44□□□□□ -1.38
RNF4-217ENST00000511892 CDC25AP30304 524 aa6.44□□□□□ -1.38
RNF4-217ENST00000511892 CCT6AP40227 531 aaKnown RBP6.44□□□□□ -1.38
RNF4-217ENST00000511892 PRSS12P56730 875 aa6.44□□□□□ -1.38
RNF4-217ENST00000511892 DSC1Q08554 894 aa6.44□□□□□ -1.38
RNF4-217ENST00000511892 FAM187BQ17R55 369 aa6.44□□□□□ -1.38
RNF4-217ENST00000511892 MCTP1Q6DN14 999 aa6.44□□□□□ -1.38
RNF4-217ENST00000511892 SLC27A1Q6PCB7 646 aa6.44□□□□□ -1.38
RNF4-217ENST00000511892 KCNK18Q7Z418 384 aa6.44□□□□□ -1.38
RNF4-217ENST00000511892 CNNM3Q8NE01 707 aa6.44□□□□□ -1.38
RNF4-217ENST00000511892 FEZF2Q8TBJ5 459 aa6.44□□□□□ -1.38
RNF4-217ENST00000511892 URGCPQ8TCY9 931 aa6.44□□□□□ -1.38
RNF4-217ENST00000511892 SLC22A17Q8WUG5 538 aa6.44□□□□□ -1.38
RNF4-217ENST00000511892 TATDN2Q93075 761 aa6.44□□□□□ -1.38
RNF4-217ENST00000511892 TMEM175Q9BSA9 504 aa6.44□□□□□ -1.38
RNF4-217ENST00000511892 KIFC3Q9BVG8 833 aa6.44□□□□□ -1.38
RNF4-217ENST00000511892 APOL6Q9BWW8 343 aa6.44□□□□□ -1.38
RNF4-217ENST00000511892 CCDC113Q9H0I3 377 aa6.44□□□□□ -1.38
RNF4-217ENST00000511892 CXCL16Q9H2A7 254 aa6.44□□□□□ -1.38
RNF4-217ENST00000511892 BHMT2Q9H2M3 363 aa6.44□□□□□ -1.38
RNF4-217ENST00000511892 NXF3Q9H4D5 531 aaKnown RBP6.44□□□□□ -1.38
RNF4-217ENST00000511892 PDZD7Q9H5P4 517 aa6.44□□□□□ -1.38
RNF4-217ENST00000511892 UBN1Q9NPG3 1134 aa6.44□□□□□ -1.38
RNF4-217ENST00000511892 DDX19AQ9NUU7 478 aaKnown RBP6.44□□□□□ -1.38
RNF4-217ENST00000511892 PRMT7Q9NVM4 692 aaPredicted RBP6.44□□□□□ -1.38
RNF4-217ENST00000511892 MARCH5Q9NX47 278 aa6.44□□□□□ -1.38
RNF4-217ENST00000511892 KANSL3Q9P2N6 904 aa6.44□□□□□ -1.38
RNF4-217ENST00000511892 CDH22Q9UJ99 828 aa6.44□□□□□ -1.38
RNF4-217ENST00000511892 FAN1Q9Y2M0 1017 aa6.44□□□□□ -1.38
RNF4-217ENST00000511892 HCFC2Q9Y5Z7 792 aa6.44□□□□□ -1.38
RNF4-217ENST00000511892 IRAK3Q9Y616 596 aa6.44□□□□□ -1.38
RNF4-217ENST00000511892 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP6.43□□□□□ -1.38
RNF4-217ENST00000511892 E9PMD0 336 aa6.43□□□□□ -1.38
RNF4-217ENST00000511892 GOLGA6L22H0YM25 854 aa6.43□□□□□ -1.38
RNF4-217ENST00000511892 LAD1O00515 517 aa6.43□□□□□ -1.38
RNF4-217ENST00000511892 ACKR2O00590 384 aa6.43□□□□□ -1.38
RNF4-217ENST00000511892 DCXO43602 365 aa6.43□□□□□ -1.38
RNF4-217ENST00000511892 ALDH2P05091 517 aa6.43□□□□□ -1.38
RNF4-217ENST00000511892 SSBP05455 408 aaKnown RBP eCLIP6.43□□□□□ -1.38
RNF4-217ENST00000511892 ALADP13716 330 aa6.43□□□□□ -1.38
RNF4-217ENST00000511892 EPCAMP16422 314 aa6.43□□□□□ -1.38
RNF4-217ENST00000511892 MCM4P33991 863 aa6.43□□□□□ -1.38
RNF4-217ENST00000511892 MLH1P40692 756 aa6.43□□□□□ -1.38
RNF4-217ENST00000511892 PRPHP41219 470 aa6.43□□□□□ -1.38
RNF4-217ENST00000511892 SCNN1GP51170 649 aa6.43□□□□□ -1.38
RNF4-217ENST00000511892 ATP2C1P98194 919 aaPredicted RBP6.43□□□□□ -1.38
RNF4-217ENST00000511892 NCBP1Q09161 790 aaKnown RBP6.43□□□□□ -1.38
RNF4-217ENST00000511892 CBX2Q14781 532 aaPredicted RBP6.43□□□□□ -1.38
RNF4-217ENST00000511892 PTPN14Q15678 1187 aa6.43□□□□□ -1.38
RNF4-217ENST00000511892 RILPL1Q5EBL4 403 aa6.43□□□□□ -1.38
RNF4-217ENST00000511892 TMEM31Q5JXX7 168 aa6.43□□□□□ -1.38
RNF4-217ENST00000511892 EEF1DP3Q658K8 133 aa6.43□□□□□ -1.38
RNF4-217ENST00000511892 HAUS3Q68CZ6 603 aa6.43□□□□□ -1.38
RNF4-217ENST00000511892 KANK3Q6NY19 840 aa6.43□□□□□ -1.38
RNF4-217ENST00000511892 DTHD1Q6ZMT9 781 aa6.43□□□□□ -1.38
RNF4-217ENST00000511892 NUDT18Q6ZVK8 323 aa6.43□□□□□ -1.38
RNF4-217ENST00000511892 TAS1R1Q7RTX1 841 aa6.43□□□□□ -1.38
RNF4-217ENST00000511892 RNF135Q8IUD6 432 aa6.43□□□□□ -1.38
RNF4-217ENST00000511892 RNF168Q8IYW5 571 aaPredicted RBP6.43□□□□□ -1.38
RNF4-217ENST00000511892 DAW1Q8N136 415 aa6.43□□□□□ -1.38
RNF4-217ENST00000511892 SNX29Q8TEQ0 813 aa6.43□□□□□ -1.38
RNF4-217ENST00000511892 PRIMPOLQ96LW4 560 aa6.43□□□□□ -1.38
RNF4-217ENST00000511892 KLHL5Q96PQ7 755 aa6.43□□□□□ -1.38
RNF4-217ENST00000511892 PNMA5Q96PV4 448 aa6.43□□□□□ -1.38
RNF4-217ENST00000511892 FAM193BQ96PV7 902 aaPredicted RBP6.43□□□□□ -1.38
RNF4-217ENST00000511892 POP1Q99575 1024 aaKnown RBP6.43□□□□□ -1.38
RNF4-217ENST00000511892 APOL5Q9BWW9 433 aa6.43□□□□□ -1.38
RNF4-217ENST00000511892 PHF7Q9BWX1 381 aaPredicted RBP6.43□□□□□ -1.38
RNF4-217ENST00000511892 IL21Q9HBE4 155 aa6.43□□□□□ -1.38
RNF4-217ENST00000511892 KLK14Q9P0G3 267 aa6.43□□□□□ -1.38
RNF4-217ENST00000511892 CACNG4Q9UBN1 327 aa6.43□□□□□ -1.38
RNF4-217ENST00000511892 MUTYHQ9UIF7 546 aa6.43□□□□□ -1.38
RNF4-217ENST00000511892 GIT1Q9Y2X7 761 aa6.43□□□□□ -1.38
RNF4-217ENST00000511892 PRG3Q9Y2Y8 225 aaPredicted RBP6.43□□□□□ -1.38
RNF4-217ENST00000511892 ZSCAN21Q9Y5A6 473 aaPredicted RBP6.43□□□□□ -1.38
RNF4-217ENST00000511892 ZMYM2Q9UBW7 1377 aa6.43□□□□□ -1.38
RNF4-217ENST00000511892 CARNS1A5YM72 827 aa6.42□□□□□ -1.38
RNF4-217ENST00000511892 H3BQV1 296 aa6.42□□□□□ -1.38
RNF4-217ENST00000511892 PTGESO14684 152 aa6.42□□□□□ -1.38
RNF4-217ENST00000511892 N4BP3O15049 544 aa6.42□□□□□ -1.38
RNF4-217ENST00000511892 SOD2P04179 222 aa6.42□□□□□ -1.38
RNF4-217ENST00000511892 PRKCBP05771 671 aa6.42□□□□□ -1.38
RNF4-217ENST00000511892 CNPP09543 421 aaKnown RBP6.42□□□□□ -1.38
RNF4-217ENST00000511892 SRGAP2BP0DMP2 458 aa6.42□□□□□ -1.38
RNF4-217ENST00000511892 HOXB8P17481 243 aaPredicted RBP6.42□□□□□ -1.38
RNF4-217ENST00000511892 LIG1P18858 919 aa6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms